RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 CKS2P33552 79 aa6.04□□□□□ -1.44
CD44-205ENST00000352818 SLURP1P55000 103 aa6.04□□□□□ -1.44
CD44-205ENST00000352818 FHL3Q13643 280 aa6.04□□□□□ -1.44
CD44-205ENST00000352818 PSMG4Q5JS54 123 aa6.04□□□□□ -1.44
CD44-205ENST00000352818 EBLN2Q6P2I7 272 aa6.04□□□□□ -1.44
CD44-205ENST00000352818 KLHL30-AS1Q8NEE0 82 aa6.04□□□□□ -1.44
CD44-205ENST00000352818 OR11H1Q8NG94 326 aa6.04□□□□□ -1.44
CD44-205ENST00000352818 OR1N2Q8NGR9 330 aa6.04□□□□□ -1.44
CD44-205ENST00000352818 OR10AG1Q8NH19 301 aa6.04□□□□□ -1.44
CD44-205ENST00000352818 PRSS3P2Q8NHM4 247 aa6.04□□□□□ -1.44
CD44-205ENST00000352818 MRAP2Q96G30 205 aa6.04□□□□□ -1.44
CD44-205ENST00000352818 TMEM70Q9BUB7 260 aa6.04□□□□□ -1.44
CD44-205ENST00000352818 VAMP8Q9BV40 100 aa6.04□□□□□ -1.44
CD44-205ENST00000352818 PRO1933Q9H354 126 aa6.04□□□□□ -1.44
CD44-205ENST00000352818 NXT2Q9NPJ8 142 aaKnown RBP6.04□□□□□ -1.44
CD44-205ENST00000352818 SIGLEC8Q9NYZ4 499 aa6.04□□□□□ -1.44
CD44-205ENST00000352818 MSRB1Q9NZV6 116 aa6.04□□□□□ -1.44
CD44-205ENST00000352818 TRAV25A0A0B4J276 109 aa6.03□□□□□ -1.44
CD44-205ENST00000352818 C20orf202A1L168 122 aa6.03□□□□□ -1.44
CD44-205ENST00000352818 NPYP01303 97 aa6.03□□□□□ -1.44
CD44-205ENST00000352818 ZNF688P0C7X2 276 aa6.03□□□□□ -1.44
CD44-205ENST00000352818 RNASE4P34096 147 aaKnown RBP6.03□□□□□ -1.44
CD44-205ENST00000352818 DEFB1P60022 68 aa6.03□□□□□ -1.44
CD44-205ENST00000352818 ANXA2RQ3ZCQ2 193 aa6.03□□□□□ -1.44
CD44-205ENST00000352818 SPANXN1Q5VSR9 72 aa6.03□□□□□ -1.44
CD44-205ENST00000352818 PET117Q6UWS5 81 aa6.03□□□□□ -1.44
CD44-205ENST00000352818 Q6ZQT7 251 aa6.03□□□□□ -1.44
CD44-205ENST00000352818 SPATA12Q7Z6I5 190 aa6.03□□□□□ -1.44
CD44-205ENST00000352818 MRPL52Q86TS9 123 aaKnown RBP6.03□□□□□ -1.44
CD44-205ENST00000352818 WFDC3Q8IUB2 231 aa6.03□□□□□ -1.44
CD44-205ENST00000352818 POM121L12Q8N7R1 296 aa6.03□□□□□ -1.44
CD44-205ENST00000352818 NDUFAF3Q9BU61 184 aa6.03□□□□□ -1.44
CD44-205ENST00000352818 MAP1LC3AQ9H492 121 aa6.03□□□□□ -1.44
CD44-205ENST00000352818 A0A096LNJ9 63 aa6.02□□□□□ -1.45
CD44-205ENST00000352818 MUC21A0A0G2JKD1 596 aa6.02□□□□□ -1.45
CD44-205ENST00000352818 MUC21A0A140T8X8 626 aa6.02□□□□□ -1.45
CD44-205ENST00000352818 SYS1-DBNDD2H3BUS1 97 aa6.02□□□□□ -1.45
CD44-205ENST00000352818 M0R381 172 aa6.02□□□□□ -1.45
CD44-205ENST00000352818 TNFRSF6BO95407 300 aa6.02□□□□□ -1.45
CD44-205ENST00000352818 RNASE3P12724 160 aaKnown RBP6.02□□□□□ -1.45
CD44-205ENST00000352818 HLA-DRB4P13762 266 aa6.02□□□□□ -1.45
CD44-205ENST00000352818 S100A4P26447 101 aaKnown RBP6.02□□□□□ -1.45
CD44-205ENST00000352818 IFI27P40305 119 aaPredicted RBP6.02□□□□□ -1.45
CD44-205ENST00000352818 CDKN1BP46527 198 aa6.02□□□□□ -1.45
CD44-205ENST00000352818 DEFB136Q30KP8 78 aa6.02□□□□□ -1.45
CD44-205ENST00000352818 MUC21Q5SSG8 566 aa6.02□□□□□ -1.45
CD44-205ENST00000352818 AMTNQ6UX39 209 aa6.02□□□□□ -1.45
CD44-205ENST00000352818 DLX4Q92988 240 aaPredicted RBP6.02□□□□□ -1.45
CD44-205ENST00000352818 CLUHP3Q96NS8 147 aa6.02□□□□□ -1.45
CD44-205ENST00000352818 AP1S3Q96PC3 154 aa6.02□□□□□ -1.45
CD44-205ENST00000352818 DPH3P1Q9H4G8 78 aa6.02□□□□□ -1.45
CD44-205ENST00000352818 ZNF256Q9Y2P7 627 aaPredicted RBP6.02□□□□□ -1.45
CD44-205ENST00000352818 HLA-DRB4X5D2U9 266 aa6.02□□□□□ -1.45
CD44-205ENST00000352818 IGLV2-18A0A075B6J9 118 aa6.01□□□□□ -1.45
CD44-205ENST00000352818 SMKR1H3BMG3 65 aa6.01□□□□□ -1.45
CD44-205ENST00000352818 J3KRW8 73 aa6.01□□□□□ -1.45
CD44-205ENST00000352818 NCR2O95944 276 aa6.01□□□□□ -1.45
CD44-205ENST00000352818 HBDP02042 147 aa6.01□□□□□ -1.45
CD44-205ENST00000352818 EVI2AP22794 236 aa6.01□□□□□ -1.45
CD44-205ENST00000352818 TFPI2P48307 235 aa6.01□□□□□ -1.45
CD44-205ENST00000352818 KIR3DS1Q14943 382 aa6.01□□□□□ -1.45
CD44-205ENST00000352818 DEFB114Q30KQ6 69 aa6.01□□□□□ -1.45
CD44-205ENST00000352818 KHDC1LQ5JSQ8 128 aa6.01□□□□□ -1.45
CD44-205ENST00000352818 FAM159AQ6UWV7 190 aa6.01□□□□□ -1.45
CD44-205ENST00000352818 Q8N8P6 123 aa6.01□□□□□ -1.45
CD44-205ENST00000352818 NRACQ8N912 160 aa6.01□□□□□ -1.45
CD44-205ENST00000352818 OR2K2Q8NGT1 345 aa6.01□□□□□ -1.45
CD44-205ENST00000352818 DYNLRB2Q8TF09 96 aa6.01□□□□□ -1.45
CD44-205ENST00000352818 C14orf144Q96I85 54 aa6.01□□□□□ -1.45
CD44-205ENST00000352818 RAX2Q96IS3 184 aa6.01□□□□□ -1.45
CD44-205ENST00000352818 C9orf85Q96MD7 179 aa6.01□□□□□ -1.45
CD44-205ENST00000352818 DUX3Q96PT4 197 aa6.01□□□□□ -1.45
CD44-205ENST00000352818 SPAG8Q99932 426 aaPredicted RBP6.01□□□□□ -1.45
CD44-205ENST00000352818 MAP1LC3CQ9BXW4 147 aa6.01□□□□□ -1.45
CD44-205ENST00000352818 PHLDA3Q9Y5J5 127 aa6.01□□□□□ -1.45
CD44-205ENST00000352818 SRRM2Q9UQ35 2752 aaKnown RBP6.01□□□□□ -1.45
CD44-205ENST00000352818 IGHV1OR15-1A0A075B7D0 117 aa6□□□□□ -1.45
CD44-205ENST00000352818 TRAV9-2A0A087WT02 112 aa6□□□□□ -1.45
CD44-205ENST00000352818 OR4C46A6NHA9 309 aa6□□□□□ -1.45
CD44-205ENST00000352818 PPP1R17O96001 155 aa6□□□□□ -1.45
CD44-205ENST00000352818 RPL32P62910 135 aaKnown RBP6□□□□□ -1.45
CD44-205ENST00000352818 LBHQ53QV2 105 aaPredicted RBP6□□□□□ -1.45
CD44-205ENST00000352818 LINC01545Q5VT33 79 aa6□□□□□ -1.45
CD44-205ENST00000352818 LINC00173Q6ZV60 143 aa6□□□□□ -1.45
CD44-205ENST00000352818 TMEM61Q8N0U2 210 aa6□□□□□ -1.45
CD44-205ENST00000352818 MIEN1Q9BRT3 115 aa6□□□□□ -1.45
CD44-205ENST00000352818 HMCN2Q8NDA2 5059 aa5.99□□□□□ -1.45
CD44-205ENST00000352818 TRGV11A0A075B6L2 103 aa5.99□□□□□ -1.45
CD44-205ENST00000352818 H3BMM0 161 aa5.99□□□□□ -1.45
CD44-205ENST00000352818 K7EMI3 77 aa5.99□□□□□ -1.45
CD44-205ENST00000352818 CCL24O00175 119 aa5.99□□□□□ -1.45
CD44-205ENST00000352818 GNRH2O43555 120 aa5.99□□□□□ -1.45
CD44-205ENST00000352818 SSTP61278 116 aa5.99□□□□□ -1.45
CD44-205ENST00000352818 SPATA45Q537H7 98 aa5.99□□□□□ -1.45
CD44-205ENST00000352818 C20orf78Q9BR46 151 aa5.99□□□□□ -1.45
CD44-205ENST00000352818 LINC00467Q9BRT7 94 aa5.99□□□□□ -1.45
CD44-205ENST00000352818 MAP6D1Q9H9H5 199 aa5.99□□□□□ -1.45
CD44-205ENST00000352818 PAM16Q9Y3D7 125 aa5.99□□□□□ -1.45
CD44-205ENST00000352818 SELENOKQ9Y6D0 94 aa5.99□□□□□ -1.45
CD44-205ENST00000352818 SORL1Q92673 2214 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms