RNA–Protein interactions for RNA: ENST00000350498.7

PDAP1-201, Transcript of PDGFA associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDAP1, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-201ENST00000350498 ASIPP42127 132 aa12.4□□□□□ -0.42
PDAP1-201ENST00000350498 KLHL30-AS1Q8NEE0 82 aa12.4□□□□□ -0.42
PDAP1-201ENST00000350498 MRAP2Q96G30 205 aa12.4□□□□□ -0.42
PDAP1-201ENST00000350498 CCDC168Q8NDH2 2452 aa12.39□□□□□ -0.43
PDAP1-201ENST00000350498 CHD6Q8TD26 2715 aa12.39□□□□□ -0.43
PDAP1-201ENST00000350498 E9PLD3 99 aa12.39□□□□□ -0.43
PDAP1-201ENST00000350498 DUSP14O95147 198 aaKnown RBP12.39□□□□□ -0.43
PDAP1-201ENST00000350498 PLNP26678 52 aa12.39□□□□□ -0.43
PDAP1-201ENST00000350498 TOMM6Q96B49 74 aa12.39□□□□□ -0.43
PDAP1-201ENST00000350498 CR1P17927 2039 aa12.39□□□□□ -0.43
PDAP1-201ENST00000350498 PRSS29PA6NIE9 313 aa12.39□□□□□ -0.43
PDAP1-201ENST00000350498 SYNJ2BPP57105 145 aa12.39□□□□□ -0.43
PDAP1-201ENST00000350498 LINC01356Q8N9X3 169 aa12.39□□□□□ -0.43
PDAP1-201ENST00000350498 PLEKHB2Q96CS7 222 aa12.39□□□□□ -0.43
PDAP1-201ENST00000350498 DPH3P1Q9H4G8 78 aa12.39□□□□□ -0.43
PDAP1-201ENST00000350498 PRRC2AP48634 2157 aaKnown RBP12.38□□□□□ -0.43
PDAP1-201ENST00000350498 TRBV7-3A0A075B6L6 115 aa12.38□□□□□ -0.43
PDAP1-201ENST00000350498 PSMG4Q5JS54 123 aa12.38□□□□□ -0.43
PDAP1-201ENST00000350498 LENEPQ9Y5L5 61 aa12.38□□□□□ -0.43
PDAP1-201ENST00000350498 A0A087WWL8 130 aa12.38□□□□□ -0.43
PDAP1-201ENST00000350498 OR11H12B2RN74 326 aa12.38□□□□□ -0.43
PDAP1-201ENST00000350498 HLA-DRB4P13762 266 aa12.38□□□□□ -0.43
PDAP1-201ENST00000350498 DEFB136Q30KP8 78 aa12.38□□□□□ -0.43
PDAP1-201ENST00000350498 OR11H1Q8NG94 326 aa12.38□□□□□ -0.43
PDAP1-201ENST00000350498 OR11H2Q8NH07 326 aa12.38□□□□□ -0.43
PDAP1-201ENST00000350498 HLA-DRB4X5D2U9 266 aa12.38□□□□□ -0.43
PDAP1-201ENST00000350498 MYMXA0A1B0GTQ4 84 aa12.37□□□□□ -0.43
PDAP1-201ENST00000350498 BRI3O95415 125 aa12.37□□□□□ -0.43
PDAP1-201ENST00000350498 LGALS1P09382 135 aaKnown RBP12.37□□□□□ -0.43
PDAP1-201ENST00000350498 FOXI2Q6ZQN5 318 aa12.37□□□□□ -0.43
PDAP1-201ENST00000350498 PRADC1Q9BSG0 188 aa12.37□□□□□ -0.43
PDAP1-201ENST00000350498 RPL39P62891 51 aaKnown RBP12.37□□□□□ -0.43
PDAP1-201ENST00000350498 CD300EQ496F6 205 aaPredicted RBP12.37□□□□□ -0.43
PDAP1-201ENST00000350498 IGHV4OR15-8A0A075B7B6 117 aa12.36□□□□□ -0.43
PDAP1-201ENST00000350498 A0A087WW49 117 aa12.36□□□□□ -0.43
PDAP1-201ENST00000350498 ETDBQ3ZM63 59 aa12.36□□□□□ -0.43
PDAP1-201ENST00000350498 ORMDL2Q53FV1 153 aa12.36□□□□□ -0.43
PDAP1-201ENST00000350498 DUX3Q96PT4 197 aa12.36□□□□□ -0.43
PDAP1-201ENST00000350498 TSHBP01222 138 aa12.36□□□□□ -0.43
PDAP1-201ENST00000350498 CRYGDP07320 174 aa12.36□□□□□ -0.43
PDAP1-201ENST00000350498 INSL3P51460 131 aa12.36□□□□□ -0.43
PDAP1-201ENST00000350498 ITPR3Q14573 2671 aa12.35□□□□□ -0.43
PDAP1-201ENST00000350498 TRAV12-1A0A0B4J245 112 aa12.35□□□□□ -0.43
PDAP1-201ENST00000350498 PRM2P04554 102 aa12.35□□□□□ -0.43
PDAP1-201ENST00000350498 SLC25A16P16260 332 aa12.35□□□□□ -0.43
PDAP1-201ENST00000350498 HOXA3O43365 443 aaPredicted RBP12.35□□□□□ -0.43
PDAP1-201ENST00000350498 CD7P09564 240 aa12.35□□□□□ -0.43
PDAP1-201ENST00000350498 MDFICQ9P1T7 246 aa12.35□□□□□ -0.43
PDAP1-201ENST00000350498 WNK1Q9H4A3 2382 aa12.34□□□□□ -0.43
PDAP1-201ENST00000350498 TMEM238C9JI98 176 aa12.34□□□□□ -0.43
PDAP1-201ENST00000350498 LINC00315P59091 139 aa12.34□□□□□ -0.43
PDAP1-201ENST00000350498 APRG1Q8IVJ8 170 aa12.34□□□□□ -0.43
PDAP1-201ENST00000350498 GTSF1LQ9H1H1 148 aa12.34□□□□□ -0.43
PDAP1-201ENST00000350498 TENM4Q6N022 2769 aa12.34□□□□□ -0.43
PDAP1-201ENST00000350498 ZNF815PA8K554 130 aa12.34□□□□□ -0.43
PDAP1-201ENST00000350498 KLLNB2CW77 178 aa12.34□□□□□ -0.43
PDAP1-201ENST00000350498 MORN3Q6PF18 240 aaPredicted RBP12.34□□□□□ -0.43
PDAP1-201ENST00000350498 SPINK13Q1W4C9 94 aa12.33□□□□□ -0.44
PDAP1-201ENST00000350498 C20orf78Q9BR46 151 aa12.33□□□□□ -0.44
PDAP1-201ENST00000350498 SPANXB1Q9NS25 103 aaPredicted RBP12.33□□□□□ -0.44
PDAP1-201ENST00000350498 C11orf86A6NJI1 115 aa12.33□□□□□ -0.44
PDAP1-201ENST00000350498 FAM74A4Q5TZK3 123 aa12.33□□□□□ -0.44
PDAP1-201ENST00000350498 TP53TG1Q9Y2A0 90 aa12.33□□□□□ -0.44
PDAP1-201ENST00000350498 COX6B1P14854 86 aa12.32□□□□□ -0.44
PDAP1-201ENST00000350498 SCGB2A2Q13296 93 aa12.32□□□□□ -0.44
PDAP1-201ENST00000350498 RRN3P1Q2M238 152 aa12.32□□□□□ -0.44
PDAP1-201ENST00000350498 FAM159AQ6UWV7 190 aa12.32□□□□□ -0.44
PDAP1-201ENST00000350498 KIF25-AS1Q9Y6Z4 181 aa12.32□□□□□ -0.44
PDAP1-201ENST00000350498 K7EMT4 169 aa12.32□□□□□ -0.44
PDAP1-201ENST00000350498 IGHV4-31P0DP07 118 aa12.32□□□□□ -0.44
PDAP1-201ENST00000350498 SCGB1D4Q6XE38 83 aa12.32□□□□□ -0.44
PDAP1-201ENST00000350498 ZNF702PQ9H963 129 aa12.32□□□□□ -0.44
PDAP1-201ENST00000350498 TSSC4Q9Y5U2 329 aaPredicted RBP12.32□□□□□ -0.44
PDAP1-201ENST00000350498 F5H697 171 aa12.31□□□□□ -0.44
PDAP1-201ENST00000350498 SUMO4Q6EEV6 95 aa12.31□□□□□ -0.44
PDAP1-201ENST00000350498 OPRPNQ99935 248 aaPredicted RBP12.31□□□□□ -0.44
PDAP1-201ENST00000350498 PGPEP1Q9NXJ5 209 aa12.31□□□□□ -0.44
PDAP1-201ENST00000350498 ACANP16112 2415 aa12.31□□□□□ -0.44
PDAP1-201ENST00000350498 GATA3P23771 443 aa12.31□□□□□ -0.44
PDAP1-201ENST00000350498 SLURP1P55000 103 aa12.31□□□□□ -0.44
PDAP1-201ENST00000350498 IGLV4-69A0A075B6H9 119 aa12.3□□□□□ -0.44
PDAP1-201ENST00000350498 HOXD3P31249 432 aaPredicted RBP12.3□□□□□ -0.44
PDAP1-201ENST00000350498 TAL2Q16559 108 aa12.3□□□□□ -0.44
PDAP1-201ENST00000350498 HIST2H2BCQ6DN03 193 aa12.3□□□□□ -0.44
PDAP1-201ENST00000350498 ZNF843Q8N446 348 aa12.3□□□□□ -0.44
PDAP1-201ENST00000350498 FLNAP21333 2647 aaKnown RBP12.3□□□□□ -0.44
PDAP1-201ENST00000350498 LINC01549A6NIU2 74 aa12.3□□□□□ -0.44
PDAP1-201ENST00000350498 HTN1P15515 57 aa12.3□□□□□ -0.44
PDAP1-201ENST00000350498 DSCR9P59020 149 aa12.3□□□□□ -0.44
PDAP1-201ENST00000350498 TSPEAR-AS2P59090 65 aa12.3□□□□□ -0.44
PDAP1-201ENST00000350498 SPAG8Q99932 426 aaPredicted RBP12.3□□□□□ -0.44
PDAP1-201ENST00000350498 VPREB3Q9UKI3 123 aa12.3□□□□□ -0.44
PDAP1-201ENST00000350498 ID1P41134 155 aa12.29□□□□□ -0.44
PDAP1-201ENST00000350498 SMAGPQ0VAQ4 97 aa12.29□□□□□ -0.44
PDAP1-201ENST00000350498 A0A0J9YX75 114 aa12.29□□□□□ -0.44
PDAP1-201ENST00000350498 APOMO95445 188 aa12.29□□□□□ -0.44
PDAP1-201ENST00000350498 ZFP2Q6ZN57 461 aa12.29□□□□□ -0.44
PDAP1-201ENST00000350498 Q8N1Y9 231 aa12.29□□□□□ -0.44
PDAP1-201ENST00000350498 PRO0461Q9UI25 63 aa12.29□□□□□ -0.44
PDAP1-201ENST00000350498 ZNF256Q9Y2P7 627 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms