RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 ZFP2Q6ZN57 461 aa13.49□□□□□ -0.25
PTP4A3-202ENST00000349124 MYO18BQ8IUG5 2567 aa13.49□□□□□ -0.25
PTP4A3-202ENST00000349124 MSMBP08118 114 aa13.49□□□□□ -0.25
PTP4A3-202ENST00000349124 OPRPNQ99935 248 aaPredicted RBP13.49□□□□□ -0.25
PTP4A3-202ENST00000349124 IGLV4-69A0A075B6H9 119 aa13.48□□□□□ -0.25
PTP4A3-202ENST00000349124 H3BUA1 57 aa13.48□□□□□ -0.25
PTP4A3-202ENST00000349124 MED14OSP0DP75 135 aa13.48□□□□□ -0.25
PTP4A3-202ENST00000349124 POLR2KP53803 58 aaKnown RBP13.48□□□□□ -0.25
PTP4A3-202ENST00000349124 RRN3P1Q2M238 152 aa13.48□□□□□ -0.25
PTP4A3-202ENST00000349124 ETDBQ3ZM63 59 aa13.48□□□□□ -0.25
PTP4A3-202ENST00000349124 MORN3Q6PF18 240 aaPredicted RBP13.48□□□□□ -0.25
PTP4A3-202ENST00000349124 SCGB1D4Q6XE38 83 aa13.48□□□□□ -0.25
PTP4A3-202ENST00000349124 DUX5Q96PT3 197 aa13.48□□□□□ -0.25
PTP4A3-202ENST00000349124 IGIPA6NJ69 53 aa13.48□□□□□ -0.25
PTP4A3-202ENST00000349124 IGHV4-59P01825 116 aa13.48□□□□□ -0.25
PTP4A3-202ENST00000349124 PRORYQ9H606 182 aa13.48□□□□□ -0.25
PTP4A3-202ENST00000349124 ZNF256Q9Y2P7 627 aaPredicted RBP13.48□□□□□ -0.25
PTP4A3-202ENST00000349124 MXRA5Q9NR99 2828 aa13.48□□□□□ -0.25
PTP4A3-202ENST00000349124 PIEZO1Q92508 2521 aa13.48□□□□□ -0.25
PTP4A3-202ENST00000349124 CFHR3Q02985 330 aa13.48□□□□□ -0.25
PTP4A3-202ENST00000349124 NXPH4O95158 308 aa13.47□□□□□ -0.25
PTP4A3-202ENST00000349124 COX6B1P14854 86 aa13.47□□□□□ -0.25
PTP4A3-202ENST00000349124 MAPK1IP1LQ8NDC0 245 aa13.47□□□□□ -0.25
PTP4A3-202ENST00000349124 DOPEY1Q5JWR5 2465 aa13.47□□□□□ -0.25
PTP4A3-202ENST00000349124 IGHV4OR15-8A0A075B7B6 117 aa13.47□□□□□ -0.25
PTP4A3-202ENST00000349124 A0A087WW49 117 aa13.47□□□□□ -0.25
PTP4A3-202ENST00000349124 SDHAF1A6NFY7 115 aa13.47□□□□□ -0.25
PTP4A3-202ENST00000349124 POM121L12Q8N7R1 296 aa13.47□□□□□ -0.25
PTP4A3-202ENST00000349124 SRSF9Q13242 221 aaKnown RBP eCLIP13.46□□□□□ -0.25
PTP4A3-202ENST00000349124 SPANXB1Q9NS25 103 aaPredicted RBP13.46□□□□□ -0.25
PTP4A3-202ENST00000349124 ACACBO00763 2458 aa13.46□□□□□ -0.25
PTP4A3-202ENST00000349124 HOXA3O43365 443 aaPredicted RBP13.46□□□□□ -0.26
PTP4A3-202ENST00000349124 BRI3O95415 125 aa13.46□□□□□ -0.26
PTP4A3-202ENST00000349124 INSL3P51460 131 aa13.46□□□□□ -0.26
PTP4A3-202ENST00000349124 PGPEP1Q9NXJ5 209 aa13.46□□□□□ -0.26
PTP4A3-202ENST00000349124 TSPEAR-AS2P59090 65 aa13.45□□□□□ -0.26
PTP4A3-202ENST00000349124 SPINK13Q1W4C9 94 aa13.45□□□□□ -0.26
PTP4A3-202ENST00000349124 ZNRF2Q8NHG8 242 aa13.45□□□□□ -0.26
PTP4A3-202ENST00000349124 A0A1B0GWB2 263 aa13.44□□□□□ -0.26
PTP4A3-202ENST00000349124 LINC01549A6NIU2 74 aa13.44□□□□□ -0.26
PTP4A3-202ENST00000349124 ID1P41134 155 aa13.44□□□□□ -0.26
PTP4A3-202ENST00000349124 DEFB112Q30KQ8 113 aa13.44□□□□□ -0.26
PTP4A3-202ENST00000349124 Q8N1Y9 231 aa13.44□□□□□ -0.26
PTP4A3-202ENST00000349124 IGSF10Q6WRI0 2623 aa13.44□□□□□ -0.26
PTP4A3-202ENST00000349124 PSMB8P28062 276 aa13.44□□□□□ -0.26
PTP4A3-202ENST00000349124 FAM208BQ5VWN6 2430 aa13.44□□□□□ -0.26
PTP4A3-202ENST00000349124 TRBV7-9A0A0J9YWB2 115 aa13.43□□□□□ -0.26
PTP4A3-202ENST00000349124 VCYO14598 125 aa13.43□□□□□ -0.26
PTP4A3-202ENST00000349124 TMEM170BQ5T4T1 132 aa13.43□□□□□ -0.26
PTP4A3-202ENST00000349124 FBN2P35556 2912 aa13.43□□□□□ -0.26
PTP4A3-202ENST00000349124 IGHV3-16A0A0C4DH30 117 aa13.43□□□□□ -0.26
PTP4A3-202ENST00000349124 F8W1H4 67 aa13.43□□□□□ -0.26
PTP4A3-202ENST00000349124 APOMO95445 188 aa13.43□□□□□ -0.26
PTP4A3-202ENST00000349124 PPP1R17O96001 155 aa13.43□□□□□ -0.26
PTP4A3-202ENST00000349124 PRM2P04554 102 aa13.43□□□□□ -0.26
PTP4A3-202ENST00000349124 KIR2DL4Q99706 377 aa13.43□□□□□ -0.26
PTP4A3-202ENST00000349124 ZFYVE26Q68DK2 2539 aa13.43□□□□□ -0.26
PTP4A3-202ENST00000349124 SYNJ2BPP57105 145 aa13.42□□□□□ -0.26
PTP4A3-202ENST00000349124 PMVKQ15126 192 aa13.42□□□□□ -0.26
PTP4A3-202ENST00000349124 GAGE13Q4V321 117 aa13.42□□□□□ -0.26
PTP4A3-202ENST00000349124 GTSF1LQ9H1H1 148 aa13.42□□□□□ -0.26
PTP4A3-202ENST00000349124 MRPL16Q9NX20 251 aaKnown RBP13.42□□□□□ -0.26
PTP4A3-202ENST00000349124 PRO0461Q9UI25 63 aa13.42□□□□□ -0.26
PTP4A3-202ENST00000349124 K7EMT4 169 aa13.42□□□□□ -0.26
PTP4A3-202ENST00000349124 ZNF56Q15929 161 aa13.42□□□□□ -0.26
PTP4A3-202ENST00000349124 SPAG8Q99932 426 aaPredicted RBP13.42□□□□□ -0.26
PTP4A3-202ENST00000349124 TSSC4Q9Y5U2 329 aaPredicted RBP13.41□□□□□ -0.26
PTP4A3-202ENST00000349124 HTN1P15515 57 aa13.41□□□□□ -0.26
PTP4A3-202ENST00000349124 A0A0J9YX75 114 aa13.41□□□□□ -0.26
PTP4A3-202ENST00000349124 TMEM238C9JI98 176 aa13.41□□□□□ -0.26
PTP4A3-202ENST00000349124 LINC01619G3V211 115 aa13.41□□□□□ -0.26
PTP4A3-202ENST00000349124 A0A0J9YY99 117 aa13.4□□□□□ -0.26
PTP4A3-202ENST00000349124 M0QY20 66 aa13.4□□□□□ -0.27
PTP4A3-202ENST00000349124 IGHV3-64A0A075B6Q5 118 aa13.39□□□□□ -0.27
PTP4A3-202ENST00000349124 LOC107984156A0A0G2JMH3 177 aa13.39□□□□□ -0.27
PTP4A3-202ENST00000349124 NDUFS8O00217 210 aa13.39□□□□□ -0.27
PTP4A3-202ENST00000349124 P0DMU3 169 aa13.39□□□□□ -0.27
PTP4A3-202ENST00000349124 FAM231AP0DMU4 169 aa13.39□□□□□ -0.27
PTP4A3-202ENST00000349124 FAM231CP0DMU5 169 aa13.39□□□□□ -0.27
PTP4A3-202ENST00000349124 ARL17AQ8IVW1 177 aa13.39□□□□□ -0.27
PTP4A3-202ENST00000349124 C9orf85Q96MD7 179 aa13.39□□□□□ -0.27
PTP4A3-202ENST00000349124 TRBV27A0A0K0K1C4 114 aa13.39□□□□□ -0.27
PTP4A3-202ENST00000349124 B4DSR2 109 aa13.39□□□□□ -0.27
PTP4A3-202ENST00000349124 IGHV3-73A0A0B4J1V6 119 aa13.38□□□□□ -0.27
PTP4A3-202ENST00000349124 LGALS9O00182 355 aa13.38□□□□□ -0.27
PTP4A3-202ENST00000349124 MYO9AB2RTY4 2548 aa13.38□□□□□ -0.27
PTP4A3-202ENST00000349124 TSPAN13O95857 204 aa13.38□□□□□ -0.27
PTP4A3-202ENST00000349124 UBE2D1P51668 147 aa13.38□□□□□ -0.27
PTP4A3-202ENST00000349124 HIST2H2BDQ6DRA6 164 aa13.38□□□□□ -0.27
PTP4A3-202ENST00000349124 PTPN13Q12923 2485 aa13.37□□□□□ -0.27
PTP4A3-202ENST00000349124 K7EQG2 157 aa13.37□□□□□ -0.27
PTP4A3-202ENST00000349124 SMCPP49901 116 aaPredicted RBP13.37□□□□□ -0.27
PTP4A3-202ENST00000349124 PROK1P58294 105 aa13.37□□□□□ -0.27
PTP4A3-202ENST00000349124 RPL32P62910 135 aaKnown RBP13.37□□□□□ -0.27
PTP4A3-202ENST00000349124 ZNF876PQ49A33 203 aa13.37□□□□□ -0.27
PTP4A3-202ENST00000349124 TGFAP01135 160 aa13.36□□□□□ -0.27
PTP4A3-202ENST00000349124 AZU1P20160 251 aa13.36□□□□□ -0.27
PTP4A3-202ENST00000349124 PSMB2P49721 201 aa13.36□□□□□ -0.27
PTP4A3-202ENST00000349124 Q9UF83 564 aa13.36□□□□□ -0.27
PTP4A3-202ENST00000349124 ZNF580Q9UK33 172 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms