RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 C20orf173Q96LM9 149 aa11.58□□□□□ -0.56
LMNA-201ENST00000347559 ZNF580Q9UK33 172 aa11.58□□□□□ -0.56
LMNA-201ENST00000347559 SVEP1Q4LDE5 3571 aa11.57□□□□□ -0.56
LMNA-201ENST00000347559 TRAV21A0A0B4J279 112 aa11.57□□□□□ -0.56
LMNA-201ENST00000347559 P0DMU3 169 aa11.57□□□□□ -0.56
LMNA-201ENST00000347559 FAM231AP0DMU4 169 aa11.57□□□□□ -0.56
LMNA-201ENST00000347559 FAM231CP0DMU5 169 aa11.57□□□□□ -0.56
LMNA-201ENST00000347559 TMEM95Q3KNT9 176 aa11.57□□□□□ -0.56
LMNA-201ENST00000347559 PPDPFQ9H3Y8 114 aa11.57□□□□□ -0.56
LMNA-201ENST00000347559 TNFRSF18Q9Y5U5 241 aa11.57□□□□□ -0.56
LMNA-201ENST00000347559 F6UB75 175 aa11.56□□□□□ -0.56
LMNA-201ENST00000347559 RPL11P62913 178 aaKnown RBP11.56□□□□□ -0.56
LMNA-201ENST00000347559 FAM74A4Q5TZK3 123 aa11.56□□□□□ -0.56
LMNA-201ENST00000347559 A0A0B4J2C4 111 aa11.55□□□□□ -0.56
LMNA-201ENST00000347559 IGHV1-69DA0A0B4J2H0 117 aa11.55□□□□□ -0.56
LMNA-201ENST00000347559 G3V318 75 aa11.55□□□□□ -0.56
LMNA-201ENST00000347559 ZFAND2AQ8N6M9 145 aa11.55□□□□□ -0.56
LMNA-201ENST00000347559 DCHS2Q6V1P9 2916 aa11.55□□□□□ -0.56
LMNA-201ENST00000347559 M0QXV9 152 aa11.55□□□□□ -0.56
LMNA-201ENST00000347559 Q6ZSV7 163 aa11.55□□□□□ -0.56
LMNA-201ENST00000347559 CLEC2BQ92478 149 aa11.55□□□□□ -0.56
LMNA-201ENST00000347559 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.55□□□□□ -0.56
LMNA-201ENST00000347559 SDHAF1A6NFY7 115 aa11.55□□□□□ -0.56
LMNA-201ENST00000347559 PPP1R17O96001 155 aa11.55□□□□□ -0.56
LMNA-201ENST00000347559 RPL13AP40429 203 aaKnown RBP11.55□□□□□ -0.56
LMNA-201ENST00000347559 ZNF876PQ49A33 203 aa11.55□□□□□ -0.56
LMNA-201ENST00000347559 CCDC140Q96MF4 163 aa11.55□□□□□ -0.56
LMNA-201ENST00000347559 ID1P41134 155 aa11.54□□□□□ -0.56
LMNA-201ENST00000347559 TMEM141Q96I45 108 aa11.54□□□□□ -0.56
LMNA-201ENST00000347559 SPTBN2O15020 2390 aa11.54□□□□□ -0.56
LMNA-201ENST00000347559 MUC4Q99102 2169 aa11.54□□□□□ -0.56
LMNA-201ENST00000347559 H7C423 109 aa11.53□□□□□ -0.56
LMNA-201ENST00000347559 ATP6V0E1O15342 81 aa11.53□□□□□ -0.56
LMNA-201ENST00000347559 SUMO4Q6EEV6 95 aa11.53□□□□□ -0.56
LMNA-201ENST00000347559 VPREB3Q9UKI3 123 aa11.53□□□□□ -0.56
LMNA-201ENST00000347559 VCYO14598 125 aa11.53□□□□□ -0.56
LMNA-201ENST00000347559 RNASE3P12724 160 aaKnown RBP11.53□□□□□ -0.56
LMNA-201ENST00000347559 UBE2E1P51965 193 aa11.53□□□□□ -0.56
LMNA-201ENST00000347559 PRR30Q53SZ7 412 aaPredicted RBP11.53□□□□□ -0.56
LMNA-201ENST00000347559 MDFICQ9P1T7 246 aa11.53□□□□□ -0.56
LMNA-201ENST00000347559 AKAP6Q13023 2319 aa11.53□□□□□ -0.56
LMNA-201ENST00000347559 LEPROTO15243 131 aa11.53□□□□□ -0.56
LMNA-201ENST00000347559 A0A0J9YXV3 536 aa11.52□□□□□ -0.56
LMNA-201ENST00000347559 M0R2P5 195 aa11.52□□□□□ -0.56
LMNA-201ENST00000347559 LINC00527Q9UJ94 153 aa11.52□□□□□ -0.56
LMNA-201ENST00000347559 ZNF22P17026 224 aaPredicted RBP11.52□□□□□ -0.57
LMNA-201ENST00000347559 VMO1Q7Z5L0 202 aa11.52□□□□□ -0.57
LMNA-201ENST00000347559 MRPL53Q96EL3 112 aaKnown RBP11.52□□□□□ -0.57
LMNA-201ENST00000347559 TIMM17AQ99595 171 aa11.52□□□□□ -0.57
LMNA-201ENST00000347559 SPXQ9BT56 116 aa11.52□□□□□ -0.57
LMNA-201ENST00000347559 FAM236AA0A1B0GUQ0 79 aa11.51□□□□□ -0.57
LMNA-201ENST00000347559 FAM236BA0A1B0GV22 79 aa11.51□□□□□ -0.57
LMNA-201ENST00000347559 POLR2KP53803 58 aaKnown RBP11.51□□□□□ -0.57
LMNA-201ENST00000347559 YAE1D1Q9NRH1 226 aa11.51□□□□□ -0.57
LMNA-201ENST00000347559 NBASA2RRP1 2371 aa11.51□□□□□ -0.57
LMNA-201ENST00000347559 TMEM223A0PJW6 202 aa11.51□□□□□ -0.57
LMNA-201ENST00000347559 ICOSQ9Y6W8 199 aa11.51□□□□□ -0.57
LMNA-201ENST00000347559 FAM110DQ8TAY7 271 aaPredicted RBP11.51□□□□□ -0.57
LMNA-201ENST00000347559 TRBV30A0A0K0K1B3 111 aa11.5□□□□□ -0.57
LMNA-201ENST00000347559 B9A039 149 aa11.5□□□□□ -0.57
LMNA-201ENST00000347559 Q8N9W7 124 aa11.5□□□□□ -0.57
LMNA-201ENST00000347559 LINC00477Q96M19 166 aa11.5□□□□□ -0.57
LMNA-201ENST00000347559 RELNP78509 3460 aa11.5□□□□□ -0.57
LMNA-201ENST00000347559 TRGV11A0A075B6L2 103 aa11.5□□□□□ -0.57
LMNA-201ENST00000347559 TRAV8-3A0A0A6YYJ7 113 aa11.5□□□□□ -0.57
LMNA-201ENST00000347559 A0A0J9YXY3 114 aa11.5□□□□□ -0.57
LMNA-201ENST00000347559 COX6CP09669 75 aa11.5□□□□□ -0.57
LMNA-201ENST00000347559 ASH1LQ9NR48 2969 aaKnown RBP11.5□□□□□ -0.57
LMNA-201ENST00000347559 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.49□□□□□ -0.57
LMNA-201ENST00000347559 ANKHD1Q8IWZ3 2542 aaKnown RBP11.49□□□□□ -0.57
LMNA-201ENST00000347559 LINC00315P59091 139 aa11.49□□□□□ -0.57
LMNA-201ENST00000347559 C9orf139Q6ZV77 190 aa11.49□□□□□ -0.57
LMNA-201ENST00000347559 EEF1AKMT3Q96AZ1 226 aa11.49□□□□□ -0.57
LMNA-201ENST00000347559 LINC01587Q99440 93 aa11.49□□□□□ -0.57
LMNA-201ENST00000347559 CD3EP07766 207 aa11.48□□□□□ -0.57
LMNA-201ENST00000347559 CEMP1Q6PRD7 247 aaPredicted RBP11.48□□□□□ -0.57
LMNA-201ENST00000347559 LY6G5BQ8NDX9 201 aa11.48□□□□□ -0.57
LMNA-201ENST00000347559 PRRC2AP48634 2157 aaKnown RBP11.48□□□□□ -0.57
LMNA-201ENST00000347559 ODF3BA8MYP8 253 aa11.48□□□□□ -0.57
LMNA-201ENST00000347559 LENEPQ9Y5L5 61 aa11.48□□□□□ -0.57
LMNA-201ENST00000347559 KIF25-AS1Q9Y6Z4 181 aa11.47□□□□□ -0.57
LMNA-201ENST00000347559 ANKRD11Q6UB99 2663 aaPredicted RBP11.47□□□□□ -0.57
LMNA-201ENST00000347559 LINC00694P0DN24 101 aa11.47□□□□□ -0.57
LMNA-201ENST00000347559 C9orf153Q5TBE3 101 aa11.47□□□□□ -0.57
LMNA-201ENST00000347559 Q8N6K4 173 aa11.47□□□□□ -0.57
LMNA-201ENST00000347559 DEFB124Q8NES8 71 aa11.47□□□□□ -0.57
LMNA-201ENST00000347559 ITLN2Q8WWU7 325 aaPredicted RBP11.47□□□□□ -0.57
LMNA-201ENST00000347559 TMEM101Q96IK0 257 aa11.47□□□□□ -0.57
LMNA-201ENST00000347559 TMEM126AQ9H061 195 aa11.47□□□□□ -0.57
LMNA-201ENST00000347559 SPANXA1Q9NS26 97 aa11.47□□□□□ -0.57
LMNA-201ENST00000347559 IGHV4OR15-8A0A075B7B6 117 aa11.46□□□□□ -0.57
LMNA-201ENST00000347559 A0A087WW49 117 aa11.46□□□□□ -0.57
LMNA-201ENST00000347559 LINC01560Q8TB33 94 aa11.46□□□□□ -0.57
LMNA-201ENST00000347559 OOSP1A8MZH6 123 aa11.46□□□□□ -0.57
LMNA-201ENST00000347559 ADAMTSL4-AS1Q5T5F5 129 aa11.46□□□□□ -0.57
LMNA-201ENST00000347559 RNASE13Q5GAN3 156 aaKnown RBP11.46□□□□□ -0.58
LMNA-201ENST00000347559 SPTA1P02549 2419 aa11.46□□□□□ -0.58
LMNA-201ENST00000347559 LOC107984640A0A0U1RRK4 108 aa11.45□□□□□ -0.58
LMNA-201ENST00000347559 H3BT86 120 aa11.45□□□□□ -0.58
LMNA-201ENST00000347559 IGHV3-30-3P0DP02 117 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms