RNA–Protein interactions for RNA: ENST00000347557.6

SMTN-202, Transcript of smoothelin, humanhuman

TSL 1 (best) BASIC

Gene SMTN, Length 3,130 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-202ENST00000347557 PPDPFQ9H3Y8 114 aa11.01□□□□□ -0.65
SMTN-202ENST00000347557 IGHV4-61A0A0C4DH41 118 aa11□□□□□ -0.65
SMTN-202ENST00000347557 TGFAP01135 160 aa11□□□□□ -0.65
SMTN-202ENST00000347557 CD7P09564 240 aa11□□□□□ -0.65
SMTN-202ENST00000347557 RPL39P62891 51 aaKnown RBP11□□□□□ -0.65
SMTN-202ENST00000347557 TOMM6Q96B49 74 aa11□□□□□ -0.65
SMTN-202ENST00000347557 ZNF256Q9Y2P7 627 aaPredicted RBP11□□□□□ -0.65
SMTN-202ENST00000347557 E9PLD3 99 aa11□□□□□ -0.65
SMTN-202ENST00000347557 FAM159AQ6UWV7 190 aa11□□□□□ -0.65
SMTN-202ENST00000347557 PLEKHB2Q96CS7 222 aa11□□□□□ -0.65
SMTN-202ENST00000347557 IGHV4-4A0A075B6R2 117 aa11□□□□□ -0.65
SMTN-202ENST00000347557 UCNP55089 124 aa11□□□□□ -0.65
SMTN-202ENST00000347557 TP53TG1Q9Y2A0 90 aa11□□□□□ -0.65
SMTN-202ENST00000347557 ABCA2Q9BZC7 2435 aa10.99□□□□□ -0.65
SMTN-202ENST00000347557 TRAV12-2A0A075B6T6 113 aa10.99□□□□□ -0.65
SMTN-202ENST00000347557 NDUFA4O00483 81 aa10.99□□□□□ -0.65
SMTN-202ENST00000347557 LGALS1P09382 135 aaKnown RBP10.99□□□□□ -0.65
SMTN-202ENST00000347557 HTN1P15515 57 aa10.99□□□□□ -0.65
SMTN-202ENST00000347557 NEXN-AS1Q8NBZ9 246 aa10.99□□□□□ -0.65
SMTN-202ENST00000347557 USP9YO00507 2555 aaPredicted RBP10.99□□□□□ -0.65
SMTN-202ENST00000347557 HOXA3O43365 443 aaPredicted RBP10.99□□□□□ -0.65
SMTN-202ENST00000347557 RNASE3P12724 160 aaKnown RBP10.99□□□□□ -0.65
SMTN-202ENST00000347557 FHL3Q13643 280 aa10.99□□□□□ -0.65
SMTN-202ENST00000347557 TMEM170BQ5T4T1 132 aa10.99□□□□□ -0.65
SMTN-202ENST00000347557 A4D1N5 150 aa10.98□□□□□ -0.65
SMTN-202ENST00000347557 ZNF688P0C7X2 276 aa10.98□□□□□ -0.65
SMTN-202ENST00000347557 GNLYP22749 145 aa10.98□□□□□ -0.65
SMTN-202ENST00000347557 GAGE13Q4V321 117 aa10.98□□□□□ -0.65
SMTN-202ENST00000347557 A0A1B0GWB2 263 aa10.98□□□□□ -0.65
SMTN-202ENST00000347557 LINC01549A6NIU2 74 aa10.97□□□□□ -0.65
SMTN-202ENST00000347557 CCDC179H3BU77 68 aa10.97□□□□□ -0.65
SMTN-202ENST00000347557 RRN3P1Q2M238 152 aa10.97□□□□□ -0.65
SMTN-202ENST00000347557 IGHV3-64A0A075B6Q5 118 aa10.97□□□□□ -0.65
SMTN-202ENST00000347557 GAGE12JA6NER3 117 aa10.97□□□□□ -0.65
SMTN-202ENST00000347557 GAGE7O76087 117 aa10.97□□□□□ -0.65
SMTN-202ENST00000347557 GAGE12FP0CL80 117 aa10.97□□□□□ -0.65
SMTN-202ENST00000347557 GAGE12GP0CL81 117 aa10.97□□□□□ -0.65
SMTN-202ENST00000347557 GAGE12IP0CL82 117 aa10.97□□□□□ -0.65
SMTN-202ENST00000347557 GAGE4Q13068 117 aa10.97□□□□□ -0.65
SMTN-202ENST00000347557 VPS13CQ709C8 3753 aa10.96□□□□□ -0.65
SMTN-202ENST00000347557 TRBV7-3A0A075B6L6 115 aa10.96□□□□□ -0.65
SMTN-202ENST00000347557 TRAV12-1A0A0B4J245 112 aa10.96□□□□□ -0.65
SMTN-202ENST00000347557 LENEPQ9Y5L5 61 aa10.96□□□□□ -0.65
SMTN-202ENST00000347557 C11orf86A6NJI1 115 aa10.96□□□□□ -0.66
SMTN-202ENST00000347557 PSMB2P49721 201 aa10.96□□□□□ -0.66
SMTN-202ENST00000347557 MUC4Q99102 2169 aa10.96□□□□□ -0.66
SMTN-202ENST00000347557 FOXI1Q12951 378 aa10.95□□□□□ -0.66
SMTN-202ENST00000347557 C10orf99Q6UWK7 81 aa10.95□□□□□ -0.66
SMTN-202ENST00000347557 OPRPNQ99935 248 aaPredicted RBP10.95□□□□□ -0.66
SMTN-202ENST00000347557 SOCS3O14543 225 aa10.95□□□□□ -0.66
SMTN-202ENST00000347557 ZNF56Q15929 161 aa10.95□□□□□ -0.66
SMTN-202ENST00000347557 C5orf47Q569G3 176 aa10.95□□□□□ -0.66
SMTN-202ENST00000347557 ZFAND6Q6FIF0 208 aa10.95□□□□□ -0.66
SMTN-202ENST00000347557 DUX5Q96PT3 197 aa10.95□□□□□ -0.66
SMTN-202ENST00000347557 KLK9Q9UKQ9 250 aa10.95□□□□□ -0.66
SMTN-202ENST00000347557 POLQO75417 2590 aa10.95□□□□□ -0.66
SMTN-202ENST00000347557 NOTCH3Q9UM47 2321 aa10.95□□□□□ -0.66
SMTN-202ENST00000347557 TAL2Q16559 108 aa10.95□□□□□ -0.66
SMTN-202ENST00000347557 PRO0461Q9UI25 63 aa10.95□□□□□ -0.66
SMTN-202ENST00000347557 SUMO4Q6EEV6 95 aa10.94□□□□□ -0.66
SMTN-202ENST00000347557 KIR2DL4Q99706 377 aa10.94□□□□□ -0.66
SMTN-202ENST00000347557 DAZ1Q9NQZ3 744 aaKnown RBP10.94□□□□□ -0.66
SMTN-202ENST00000347557 RNF223E7ERA6 249 aa10.94□□□□□ -0.66
SMTN-202ENST00000347557 PIMREGQ9BSJ6 248 aa10.94□□□□□ -0.66
SMTN-202ENST00000347557 SDHAF1A6NFY7 115 aa10.93□□□□□ -0.66
SMTN-202ENST00000347557 H7C2G1 150 aa10.93□□□□□ -0.66
SMTN-202ENST00000347557 ZFP2Q6ZN57 461 aa10.93□□□□□ -0.66
SMTN-202ENST00000347557 TEX29Q8N6K0 151 aa10.93□□□□□ -0.66
SMTN-202ENST00000347557 USMG5Q96IX5 58 aa10.93□□□□□ -0.66
SMTN-202ENST00000347557 CCL19Q99731 98 aa10.93□□□□□ -0.66
SMTN-202ENST00000347557 MDFICQ9P1T7 246 aa10.93□□□□□ -0.66
SMTN-202ENST00000347557 CENPEQ02224 2701 aa10.92□□□□□ -0.66
SMTN-202ENST00000347557 TRAV25A0A0B4J276 109 aa10.92□□□□□ -0.66
SMTN-202ENST00000347557 C19orf54Q5BKX5 351 aa10.92□□□□□ -0.66
SMTN-202ENST00000347557 MORN3Q6PF18 240 aaPredicted RBP10.92□□□□□ -0.66
SMTN-202ENST00000347557 CSDC2Q9Y534 153 aaKnown RBP10.92□□□□□ -0.66
SMTN-202ENST00000347557 CACNA1AO00555 2505 aa10.91□□□□□ -0.66
SMTN-202ENST00000347557 IGHV4-30-2A0A087WSY4 118 aa10.91□□□□□ -0.66
SMTN-202ENST00000347557 IGHV3-73A0A0B4J1V6 119 aa10.91□□□□□ -0.66
SMTN-202ENST00000347557 IGHG2P01859 326 aa10.91□□□□□ -0.66
SMTN-202ENST00000347557 CRYGDP07320 174 aa10.91□□□□□ -0.66
SMTN-202ENST00000347557 HERVK_113P61574 105 aa10.91□□□□□ -0.66
SMTN-202ENST00000347557 SPINK13Q1W4C9 94 aa10.91□□□□□ -0.66
SMTN-202ENST00000347557 KLK9Q2XQG4 91 aa10.91□□□□□ -0.66
SMTN-202ENST00000347557 TSHBP01222 138 aa10.91□□□□□ -0.66
SMTN-202ENST00000347557 NRGNQ92686 78 aa10.91□□□□□ -0.66
SMTN-202ENST00000347557 PTH2Q96A98 100 aa10.91□□□□□ -0.66
SMTN-202ENST00000347557 VCX2Q9H322 139 aa10.91□□□□□ -0.66
SMTN-202ENST00000347557 FAM208BQ5VWN6 2430 aa10.91□□□□□ -0.66
SMTN-202ENST00000347557 CRYBG3Q68DQ2 2970 aa10.91□□□□□ -0.66
SMTN-202ENST00000347557 MAPK1IP1LQ8NDC0 245 aa10.91□□□□□ -0.66
SMTN-202ENST00000347557 TRBV20-1A0A075B6N2 111 aa10.9□□□□□ -0.66
SMTN-202ENST00000347557 SCGB1C2P0DMR2 95 aa10.9□□□□□ -0.66
SMTN-202ENST00000347557 VCYO14598 125 aa10.9□□□□□ -0.66
SMTN-202ENST00000347557 PPP1R17O96001 155 aa10.9□□□□□ -0.66
SMTN-202ENST00000347557 PMVKQ15126 192 aa10.9□□□□□ -0.66
SMTN-202ENST00000347557 NFE4Q86UQ8 179 aa10.89□□□□□ -0.67
SMTN-202ENST00000347557 CELSR2Q9HCU4 2923 aa10.89□□□□□ -0.67
SMTN-202ENST00000347557 ACACBO00763 2458 aa10.89□□□□□ -0.67
SMTN-202ENST00000347557 AVPP01185 164 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms