RNA–Protein interactions for RNA: ENST00000347547.6

LRP8-202, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,382 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-202ENST00000347547 OOSP1A8MZH6 123 aa11.82□□□□□ -0.52
LRP8-202ENST00000347547 M0R1W7 72 aa11.82□□□□□ -0.52
LRP8-202ENST00000347547 LGALS9O00182 355 aa11.82□□□□□ -0.52
LRP8-202ENST00000347547 LEPROTO15243 131 aa11.82□□□□□ -0.52
LRP8-202ENST00000347547 S100A4P26447 101 aaKnown RBP11.82□□□□□ -0.52
LRP8-202ENST00000347547 POLR2KP53803 58 aaKnown RBP11.82□□□□□ -0.52
LRP8-202ENST00000347547 EMP1P54849 157 aa11.82□□□□□ -0.52
LRP8-202ENST00000347547 TMEM170BQ5T4T1 132 aa11.82□□□□□ -0.52
LRP8-202ENST00000347547 METTL26Q96S19 204 aa11.82□□□□□ -0.52
LRP8-202ENST00000347547 A0A0J9YX75 114 aa11.81□□□□□ -0.52
LRP8-202ENST00000347547 LYNX1G3V0Z9 82 aa11.81□□□□□ -0.52
LRP8-202ENST00000347547 H3BMM0 161 aa11.81□□□□□ -0.52
LRP8-202ENST00000347547 LYNX1P0DP58 116 aa11.81□□□□□ -0.52
LRP8-202ENST00000347547 C9orf139Q6ZV77 190 aa11.81□□□□□ -0.52
LRP8-202ENST00000347547 UBE2WQ96B02 151 aa11.81□□□□□ -0.52
LRP8-202ENST00000347547 IGF2RP11717 2491 aa11.8□□□□□ -0.52
LRP8-202ENST00000347547 LINC00315P59091 139 aa11.8□□□□□ -0.52
LRP8-202ENST00000347547 KIF25-AS1Q9Y6Z4 181 aa11.8□□□□□ -0.52
LRP8-202ENST00000347547 TEX49A0A1B0GTD5 131 aa11.79□□□□□ -0.52
LRP8-202ENST00000347547 FAM240AA0A1B0GVK7 77 aa11.79□□□□□ -0.52
LRP8-202ENST00000347547 CCDC140Q96MF4 163 aa11.79□□□□□ -0.52
LRP8-202ENST00000347547 VCYO14598 125 aa11.79□□□□□ -0.52
LRP8-202ENST00000347547 ELANEP08246 267 aa11.79□□□□□ -0.52
LRP8-202ENST00000347547 TRAV2A0A0B4J234 112 aa11.78□□□□□ -0.52
LRP8-202ENST00000347547 TMEM223A0PJW6 202 aa11.78□□□□□ -0.52
LRP8-202ENST00000347547 IGF1P05019 195 aa11.78□□□□□ -0.52
LRP8-202ENST00000347547 MUSTN1Q8IVN3 82 aa11.78□□□□□ -0.52
LRP8-202ENST00000347547 C16orf92Q96LL3 132 aa11.78□□□□□ -0.52
LRP8-202ENST00000347547 TNFRSF18Q9Y5U5 241 aa11.78□□□□□ -0.52
LRP8-202ENST00000347547 SDHAF1A6NFY7 115 aa11.78□□□□□ -0.52
LRP8-202ENST00000347547 APRG1Q8IVJ8 170 aa11.78□□□□□ -0.52
LRP8-202ENST00000347547 SPRY2O43597 315 aa11.77□□□□□ -0.52
LRP8-202ENST00000347547 RNASE3P12724 160 aaKnown RBP11.77□□□□□ -0.52
LRP8-202ENST00000347547 ARL3P36405 182 aa11.77□□□□□ -0.52
LRP8-202ENST00000347547 RPL39P62891 51 aaKnown RBP11.77□□□□□ -0.52
LRP8-202ENST00000347547 DEFB121Q5J5C9 76 aa11.77□□□□□ -0.52
LRP8-202ENST00000347547 C20orf173Q96LM9 149 aa11.77□□□□□ -0.52
LRP8-202ENST00000347547 FAM19A4Q96LR4 140 aa11.77□□□□□ -0.52
LRP8-202ENST00000347547 TLN1Q9Y490 2541 aaKnown RBP11.77□□□□□ -0.53
LRP8-202ENST00000347547 IGHV3OR16-13A0A075B7E8 117 aa11.77□□□□□ -0.53
LRP8-202ENST00000347547 IGHV3-74A0A0B4J1X5 117 aa11.77□□□□□ -0.53
LRP8-202ENST00000347547 H3BT86 120 aa11.77□□□□□ -0.53
LRP8-202ENST00000347547 M0R2P5 195 aa11.77□□□□□ -0.53
LRP8-202ENST00000347547 IGHV1-69P01742 117 aa11.77□□□□□ -0.53
LRP8-202ENST00000347547 Q8N9W7 124 aa11.77□□□□□ -0.53
LRP8-202ENST00000347547 TMEM126AQ9H061 195 aa11.77□□□□□ -0.53
LRP8-202ENST00000347547 OVOL1O14753 267 aa11.76□□□□□ -0.53
LRP8-202ENST00000347547 MEIG1Q5JSS6 88 aa11.76□□□□□ -0.53
LRP8-202ENST00000347547 CLEC19AQ6UXS0 136 aa11.76□□□□□ -0.53
LRP8-202ENST00000347547 TACC2O95359 2948 aa11.76□□□□□ -0.53
LRP8-202ENST00000347547 TRBV7-7A0A0K0K1E9 115 aa11.76□□□□□ -0.53
LRP8-202ENST00000347547 Q1RN00 199 aa11.76□□□□□ -0.53
LRP8-202ENST00000347547 VMO1Q7Z5L0 202 aa11.76□□□□□ -0.53
LRP8-202ENST00000347547 TRBV7-1A0A0A6YYK4 115 aa11.75□□□□□ -0.53
LRP8-202ENST00000347547 TRBV6-5A0A0K0K1A5 114 aa11.75□□□□□ -0.53
LRP8-202ENST00000347547 TRBV27A0A0K0K1C4 114 aa11.75□□□□□ -0.53
LRP8-202ENST00000347547 H7C2G1 150 aa11.75□□□□□ -0.53
LRP8-202ENST00000347547 TRIAP1O43715 76 aa11.75□□□□□ -0.53
LRP8-202ENST00000347547 IGHV4-39P01824 125 aa11.75□□□□□ -0.53
LRP8-202ENST00000347547 MINOS1Q5TGZ0 78 aa11.75□□□□□ -0.53
LRP8-202ENST00000347547 EEF1AKMT3Q96AZ1 226 aa11.75□□□□□ -0.53
LRP8-202ENST00000347547 MINOS1-NBL1R4GNA1 71 aa11.75□□□□□ -0.53
LRP8-202ENST00000347547 POLEQ07864 2286 aa11.75□□□□□ -0.53
LRP8-202ENST00000347547 IGHV3-49A0A0A0MS15 119 aa11.74□□□□□ -0.53
LRP8-202ENST00000347547 C2orf82Q6UX34 121 aa11.74□□□□□ -0.53
LRP8-202ENST00000347547 SUMO4Q6EEV6 95 aa11.74□□□□□ -0.53
LRP8-202ENST00000347547 H7C423 109 aa11.73□□□□□ -0.53
LRP8-202ENST00000347547 C1orf122Q6ZSJ8 110 aa11.73□□□□□ -0.53
LRP8-202ENST00000347547 J3KRW8 73 aa11.72□□□□□ -0.53
LRP8-202ENST00000347547 GNRH2O43555 120 aa11.72□□□□□ -0.53
LRP8-202ENST00000347547 ECSCRQ19T08 205 aa11.72□□□□□ -0.53
LRP8-202ENST00000347547 SOCS3O14543 225 aa11.72□□□□□ -0.53
LRP8-202ENST00000347547 BRI3O95415 125 aa11.72□□□□□ -0.53
LRP8-202ENST00000347547 ZNF22P17026 224 aaPredicted RBP11.72□□□□□ -0.53
LRP8-202ENST00000347547 RHOHQ15669 191 aa11.72□□□□□ -0.53
LRP8-202ENST00000347547 NSUN5P1Q3KNT7 163 aa11.72□□□□□ -0.53
LRP8-202ENST00000347547 TPRP12270 2363 aaKnown RBP11.72□□□□□ -0.53
LRP8-202ENST00000347547 A0A0J9YXY3 114 aa11.71□□□□□ -0.53
LRP8-202ENST00000347547 ATP6V0E1O15342 81 aa11.71□□□□□ -0.53
LRP8-202ENST00000347547 CD3EP07766 207 aa11.71□□□□□ -0.53
LRP8-202ENST00000347547 LINC01587Q99440 93 aa11.71□□□□□ -0.53
LRP8-202ENST00000347547 SPANXDQ9BXN6 97 aa11.71□□□□□ -0.54
LRP8-202ENST00000347547 ICOSQ9Y6W8 199 aa11.71□□□□□ -0.54
LRP8-202ENST00000347547 RNASE4P34096 147 aaKnown RBP11.7□□□□□ -0.54
LRP8-202ENST00000347547 UCNP55089 124 aa11.7□□□□□ -0.54
LRP8-202ENST00000347547 LY6DQ14210 128 aa11.7□□□□□ -0.54
LRP8-202ENST00000347547 LITAFQ99732 161 aa11.7□□□□□ -0.54
LRP8-202ENST00000347547 IMUPQ9GZP8 106 aa11.7□□□□□ -0.54
LRP8-202ENST00000347547 COX6CP09669 75 aa11.69□□□□□ -0.54
LRP8-202ENST00000347547 BEX4Q9NWD9 120 aaPredicted RBP11.69□□□□□ -0.54
LRP8-202ENST00000347547 SPANXCQ9NY87 97 aa11.69□□□□□ -0.54
LRP8-202ENST00000347547 CACNA1AO00555 2505 aa11.69□□□□□ -0.54
LRP8-202ENST00000347547 PIEZO1Q92508 2521 aa11.69□□□□□ -0.54
LRP8-202ENST00000347547 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.68□□□□□ -0.54
LRP8-202ENST00000347547 ZNF56Q15929 161 aa11.68□□□□□ -0.54
LRP8-202ENST00000347547 ITPR1Q14643 2758 aa11.68□□□□□ -0.54
LRP8-202ENST00000347547 ARHGAP32A7KAX9 2087 aa11.68□□□□□ -0.54
LRP8-202ENST00000347547 CHD8Q9HCK8 2581 aa11.68□□□□□ -0.54
LRP8-202ENST00000347547 VPREB3Q9UKI3 123 aa11.68□□□□□ -0.54
LRP8-202ENST00000347547 NCOR2Q9Y618 2525 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms