RNA–Protein interactions for RNA: ENST00000347048.8

PTPA-202, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-202ENST00000347048 SYT8Q8NBV8 401 aa18.06■□□□□ 0.48
PTPA-202ENST00000347048 MUC4Q99102 2169 aa18.06■□□□□ 0.48
PTPA-202ENST00000347048 TRBV27A0A0K0K1C4 114 aa18.06■□□□□ 0.48
PTPA-202ENST00000347048 AVPP01185 164 aa18.06■□□□□ 0.48
PTPA-202ENST00000347048 TSHBP01222 138 aa18.05■□□□□ 0.48
PTPA-202ENST00000347048 IGLV4-69A0A075B6H9 119 aa18.04■□□□□ 0.48
PTPA-202ENST00000347048 IGHV3-16A0A0C4DH30 117 aa18.04■□□□□ 0.48
PTPA-202ENST00000347048 F5H697 171 aa18.04■□□□□ 0.48
PTPA-202ENST00000347048 AKAP6Q13023 2319 aa18.04■□□□□ 0.48
PTPA-202ENST00000347048 A0A0J9YX75 114 aa18.04■□□□□ 0.48
PTPA-202ENST00000347048 JPT2Q9H910 190 aa18.04■□□□□ 0.48
PTPA-202ENST00000347048 SDHAF1A6NFY7 115 aa18.03■□□□□ 0.48
PTPA-202ENST00000347048 HOXA3O43365 443 aaPredicted RBP18.03■□□□□ 0.48
PTPA-202ENST00000347048 TMEM95Q3KNT9 176 aa18.03■□□□□ 0.48
PTPA-202ENST00000347048 A0A087WWL8 130 aa18.02■□□□□ 0.48
PTPA-202ENST00000347048 C11orf86A6NJI1 115 aa18.02■□□□□ 0.48
PTPA-202ENST00000347048 RPL24P83731 157 aaKnown RBP18.02■□□□□ 0.48
PTPA-202ENST00000347048 SCGB1D4Q6XE38 83 aa18.02■□□□□ 0.48
PTPA-202ENST00000347048 K7EQG2 157 aa18.02■□□□□ 0.47
PTPA-202ENST00000347048 ZNF688P0C7X2 276 aa18.01■□□□□ 0.47
PTPA-202ENST00000347048 AGRNO00468 2067 aa18.01■□□□□ 0.47
PTPA-202ENST00000347048 ASH1LQ9NR48 2969 aaKnown RBP18■□□□□ 0.47
PTPA-202ENST00000347048 TEX48A0A1B0GUV7 120 aa18■□□□□ 0.47
PTPA-202ENST00000347048 IGHV4-59P01825 116 aa18■□□□□ 0.47
PTPA-202ENST00000347048 RHOHQ15669 191 aa18■□□□□ 0.47
PTPA-202ENST00000347048 DEFB112Q30KQ8 113 aa18■□□□□ 0.47
PTPA-202ENST00000347048 IGHV1OR15-1A0A075B7D0 117 aa17.99■□□□□ 0.47
PTPA-202ENST00000347048 CD300EQ496F6 205 aaPredicted RBP17.99■□□□□ 0.47
PTPA-202ENST00000347048 WFDC12Q8WWY7 111 aa17.99■□□□□ 0.47
PTPA-202ENST00000347048 SVEP1Q4LDE5 3571 aa17.99■□□□□ 0.47
PTPA-202ENST00000347048 RNF152Q8N8N0 203 aa17.99■□□□□ 0.47
PTPA-202ENST00000347048 LINC01356Q8N9X3 169 aa17.99■□□□□ 0.47
PTPA-202ENST00000347048 J3QLI3 93 aa17.98■□□□□ 0.47
PTPA-202ENST00000347048 NSUN5P1Q3KNT7 163 aa17.98■□□□□ 0.47
PTPA-202ENST00000347048 ZNF876PQ49A33 203 aa17.98■□□□□ 0.47
PTPA-202ENST00000347048 MORN3Q6PF18 240 aaPredicted RBP17.98■□□□□ 0.47
PTPA-202ENST00000347048 TRPT1Q86TN4 253 aaKnown RBP17.98■□□□□ 0.47
PTPA-202ENST00000347048 PLA2G2AP14555 144 aa17.97■□□□□ 0.47
PTPA-202ENST00000347048 UBE2D1P51668 147 aa17.97■□□□□ 0.47
PTPA-202ENST00000347048 RPL39P62891 51 aaKnown RBP17.97■□□□□ 0.47
PTPA-202ENST00000347048 SRSF9Q13242 221 aaKnown RBP eCLIP17.97■□□□□ 0.47
PTPA-202ENST00000347048 PLEKHB2Q96CS7 222 aa17.97■□□□□ 0.47
PTPA-202ENST00000347048 FLNCQ14315 2725 aa17.97■□□□□ 0.47
PTPA-202ENST00000347048 COL12A1Q99715 3063 aa17.97■□□□□ 0.47
PTPA-202ENST00000347048 J3QR89 54 aa17.97■□□□□ 0.47
PTPA-202ENST00000347048 M0QY20 66 aa17.97■□□□□ 0.47
PTPA-202ENST00000347048 Q8N1Y9 231 aa17.97■□□□□ 0.47
PTPA-202ENST00000347048 SPANXB1Q9NS25 103 aaPredicted RBP17.97■□□□□ 0.47
PTPA-202ENST00000347048 MDFICQ9P1T7 246 aa17.97■□□□□ 0.47
PTPA-202ENST00000347048 H3BMG7 143 aa17.96■□□□□ 0.47
PTPA-202ENST00000347048 ZNF56Q15929 161 aa17.96■□□□□ 0.47
PTPA-202ENST00000347048 GAGE13Q4V321 117 aa17.96■□□□□ 0.47
PTPA-202ENST00000347048 FAM74A4Q5TZK3 123 aa17.96■□□□□ 0.47
PTPA-202ENST00000347048 UBR5O95071 2799 aaPredicted RBP17.95■□□□□ 0.46
PTPA-202ENST00000347048 WFDC2Q14508 124 aa17.95■□□□□ 0.46
PTPA-202ENST00000347048 PGPEP1Q9NXJ5 209 aa17.95■□□□□ 0.46
PTPA-202ENST00000347048 TRAV12-2A0A075B6T6 113 aa17.94■□□□□ 0.46
PTPA-202ENST00000347048 A0A0J9YY99 117 aa17.94■□□□□ 0.46
PTPA-202ENST00000347048 ZNF256Q9Y2P7 627 aaPredicted RBP17.94■□□□□ 0.46
PTPA-202ENST00000347048 TRGV11A0A075B6L2 103 aa17.93■□□□□ 0.46
PTPA-202ENST00000347048 ELANEP08246 267 aa17.93■□□□□ 0.46
PTPA-202ENST00000347048 NFE4Q86UQ8 179 aa17.93■□□□□ 0.46
PTPA-202ENST00000347048 KLHL30-AS1Q8NEE0 82 aa17.93■□□□□ 0.46
PTPA-202ENST00000347048 MRPL16Q9NX20 251 aaKnown RBP17.93■□□□□ 0.46
PTPA-202ENST00000347048 C10orf99Q6UWK7 81 aa17.93■□□□□ 0.46
PTPA-202ENST00000347048 PRO0461Q9UI25 63 aa17.93■□□□□ 0.46
PTPA-202ENST00000347048 SPTAN1Q13813 2472 aaKnown RBP17.92■□□□□ 0.46
PTPA-202ENST00000347048 IGKV3-20P01619 116 aa17.92■□□□□ 0.46
PTPA-202ENST00000347048 MYO18BQ8IUG5 2567 aa17.92■□□□□ 0.46
PTPA-202ENST00000347048 SYNJ2BPP57105 145 aa17.91■□□□□ 0.46
PTPA-202ENST00000347048 SPINK13Q1W4C9 94 aa17.91■□□□□ 0.46
PTPA-202ENST00000347048 TMEM170BQ5T4T1 132 aa17.91■□□□□ 0.46
PTPA-202ENST00000347048 USP9XQ93008 2570 aaPredicted RBP17.91■□□□□ 0.46
PTPA-202ENST00000347048 EMP1P54849 157 aa17.91■□□□□ 0.46
PTPA-202ENST00000347048 LYRM7Q5U5X0 104 aa17.91■□□□□ 0.46
PTPA-202ENST00000347048 AMTNQ6UX39 209 aa17.91■□□□□ 0.46
PTPA-202ENST00000347048 ZNRF2Q8NHG8 242 aa17.9■□□□□ 0.46
PTPA-202ENST00000347048 J3QKU1 62 aa17.9■□□□□ 0.46
PTPA-202ENST00000347048 SLC25A29Q8N8R3 303 aa17.9■□□□□ 0.46
PTPA-202ENST00000347048 UBE2E2Q96LR5 201 aa17.9■□□□□ 0.46
PTPA-202ENST00000347048 EDA2RQ9HAV5 297 aa17.9■□□□□ 0.46
PTPA-202ENST00000347048 VPREB3Q9UKI3 123 aa17.9■□□□□ 0.46
PTPA-202ENST00000347048 I3L3M4 83 aa17.89■□□□□ 0.45
PTPA-202ENST00000347048 C20orf203Q8NBC4 194 aa17.88■□□□□ 0.45
PTPA-202ENST00000347048 DLX4Q92988 240 aaPredicted RBP17.88■□□□□ 0.45
PTPA-202ENST00000347048 A0A096LNT2 108 aa17.87■□□□□ 0.45
PTPA-202ENST00000347048 J3QQQ9 107 aa17.87■□□□□ 0.45
PTPA-202ENST00000347048 LGALS3P17931 250 aaKnown RBP17.87■□□□□ 0.45
PTPA-202ENST00000347048 HOXD3P31249 432 aaPredicted RBP17.87■□□□□ 0.45
PTPA-202ENST00000347048 TSPAN13O95857 204 aa17.86■□□□□ 0.45
PTPA-202ENST00000347048 TSPEAR-AS2P59090 65 aa17.86■□□□□ 0.45
PTPA-202ENST00000347048 DEFB104AQ8WTQ1 72 aa17.86■□□□□ 0.45
PTPA-202ENST00000347048 ZFHX3Q15911 3703 aa17.86■□□□□ 0.45
PTPA-202ENST00000347048 IGHV3-30P01768 117 aa17.86■□□□□ 0.45
PTPA-202ENST00000347048 IGHV3-30-5P0DP03 117 aa17.86■□□□□ 0.45
PTPA-202ENST00000347048 ETDBQ3ZM63 59 aa17.86■□□□□ 0.45
PTPA-202ENST00000347048 LEPROTO15243 131 aa17.85■□□□□ 0.45
PTPA-202ENST00000347048 P0DMU3 169 aa17.85■□□□□ 0.45
PTPA-202ENST00000347048 FAM231AP0DMU4 169 aa17.85■□□□□ 0.45
PTPA-202ENST00000347048 FAM231CP0DMU5 169 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms