RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 AGPAT4-IT1Q9H0P7 198 aa9.66□□□□□ -0.86
CLK3-201ENST00000345005 NF1P21359 2839 aa9.65□□□□□ -0.86
CLK3-201ENST00000345005 CKS1BP61024 79 aa9.65□□□□□ -0.86
CLK3-201ENST00000345005 PCP2Q8IVA1 136 aa9.65□□□□□ -0.86
CLK3-201ENST00000345005 C20orf173Q96LM9 149 aa9.65□□□□□ -0.86
CLK3-201ENST00000345005 CHAC1Q9BUX1 264 aa9.65□□□□□ -0.86
CLK3-201ENST00000345005 DKK2Q9UBU2 259 aa9.65□□□□□ -0.86
CLK3-201ENST00000345005 HHLA3Q9XRX5 114 aa9.65□□□□□ -0.86
CLK3-201ENST00000345005 K7EMI3 77 aa9.64□□□□□ -0.87
CLK3-201ENST00000345005 EDN2P20800 178 aa9.64□□□□□ -0.87
CLK3-201ENST00000345005 C18orf65Q6ZTR6 163 aa9.64□□□□□ -0.87
CLK3-201ENST00000345005 OR11H1Q8NG94 326 aa9.64□□□□□ -0.87
CLK3-201ENST00000345005 OR10J6PQ8NGY7 276 aa9.64□□□□□ -0.87
CLK3-201ENST00000345005 LINC00477Q96M19 166 aa9.64□□□□□ -0.87
CLK3-201ENST00000345005 IGKV3-7A0A075B6H7 116 aa9.63□□□□□ -0.87
CLK3-201ENST00000345005 OR11H12B2RN74 326 aa9.63□□□□□ -0.87
CLK3-201ENST00000345005 GCSHP23434 173 aa9.63□□□□□ -0.87
CLK3-201ENST00000345005 PLNP26678 52 aa9.63□□□□□ -0.87
CLK3-201ENST00000345005 DEFB136Q30KP8 78 aa9.63□□□□□ -0.87
CLK3-201ENST00000345005 CEND1Q8N111 149 aa9.63□□□□□ -0.87
CLK3-201ENST00000345005 KLHL30-AS1Q8NEE0 82 aa9.63□□□□□ -0.87
CLK3-201ENST00000345005 OR11H2Q8NH07 326 aa9.63□□□□□ -0.87
CLK3-201ENST00000345005 LINC01006Q8NI28 216 aa9.63□□□□□ -0.87
CLK3-201ENST00000345005 RAB37Q96AX2 223 aa9.63□□□□□ -0.87
CLK3-201ENST00000345005 LENEPQ9Y5L5 61 aa9.63□□□□□ -0.87
CLK3-201ENST00000345005 NDUFA7O95182 113 aa9.63□□□□□ -0.87
CLK3-201ENST00000345005 SLURP1P55000 103 aa9.63□□□□□ -0.87
CLK3-201ENST00000345005 LAGE3Q14657 143 aa9.63□□□□□ -0.87
CLK3-201ENST00000345005 VCX2Q9H322 139 aa9.63□□□□□ -0.87
CLK3-201ENST00000345005 PEMTQ9UBM1 199 aa9.63□□□□□ -0.87
CLK3-201ENST00000345005 IGHV4-4A0A075B6R2 117 aa9.62□□□□□ -0.87
CLK3-201ENST00000345005 DCANP1Q8TF63 244 aa9.62□□□□□ -0.87
CLK3-201ENST00000345005 SPANXA1Q9NS26 97 aa9.62□□□□□ -0.87
CLK3-201ENST00000345005 SETD2Q9BYW2 2564 aaPredicted RBP9.61□□□□□ -0.87
CLK3-201ENST00000345005 TRBV25-1A0A075B6N4 114 aa9.61□□□□□ -0.87
CLK3-201ENST00000345005 TRAV12-1A0A0B4J245 112 aa9.61□□□□□ -0.87
CLK3-201ENST00000345005 SMKR1H3BMG3 65 aa9.61□□□□□ -0.87
CLK3-201ENST00000345005 ZNF80P51504 273 aaPredicted RBP9.61□□□□□ -0.87
CLK3-201ENST00000345005 ANK3Q12955 4377 aaKnown RBP9.61□□□□□ -0.87
CLK3-201ENST00000345005 A0A087WX48 190 aa9.61□□□□□ -0.87
CLK3-201ENST00000345005 TEX48A0A1B0GUV7 120 aa9.61□□□□□ -0.87
CLK3-201ENST00000345005 LINC01549A6NIU2 74 aa9.61□□□□□ -0.87
CLK3-201ENST00000345005 E9PLD3 99 aa9.61□□□□□ -0.87
CLK3-201ENST00000345005 RPL24P83731 157 aaKnown RBP9.61□□□□□ -0.87
CLK3-201ENST00000345005 WFDC3Q8IUB2 231 aa9.61□□□□□ -0.87
CLK3-201ENST00000345005 TMEM158Q8WZ71 300 aa9.61□□□□□ -0.87
CLK3-201ENST00000345005 C18orf15Q96N68 181 aa9.61□□□□□ -0.87
CLK3-201ENST00000345005 MRPL16Q9NX20 251 aaKnown RBP9.61□□□□□ -0.87
CLK3-201ENST00000345005 IGLV2-18A0A075B6J9 118 aa9.6□□□□□ -0.87
CLK3-201ENST00000345005 CD28P10747 220 aa9.6□□□□□ -0.87
CLK3-201ENST00000345005 SNRPD3P62318 126 aaKnown RBP9.6□□□□□ -0.87
CLK3-201ENST00000345005 SMAGPQ0VAQ4 97 aa9.6□□□□□ -0.87
CLK3-201ENST00000345005 ZC2HC1BQ5TFG8 222 aa9.6□□□□□ -0.87
CLK3-201ENST00000345005 ATP6V0E2Q8NHE4 81 aa9.6□□□□□ -0.87
CLK3-201ENST00000345005 GTSF1LQ9H1H1 148 aa9.6□□□□□ -0.87
CLK3-201ENST00000345005 TSSC4Q9Y5U2 329 aaPredicted RBP9.6□□□□□ -0.87
CLK3-201ENST00000345005 SELENOKQ9Y6D0 94 aa9.6□□□□□ -0.87
CLK3-201ENST00000345005 TRBV7-9A0A0J9YWB2 115 aa9.59□□□□□ -0.87
CLK3-201ENST00000345005 K7EQG2 157 aa9.59□□□□□ -0.87
CLK3-201ENST00000345005 PPP1R17O96001 155 aa9.59□□□□□ -0.87
CLK3-201ENST00000345005 ORMDL2Q53FV1 153 aa9.59□□□□□ -0.87
CLK3-201ENST00000345005 PHLDA1Q8WV24 401 aaPredicted RBP9.59□□□□□ -0.87
CLK3-201ENST00000345005 SPANXB1Q9NS25 103 aaPredicted RBP9.59□□□□□ -0.87
CLK3-201ENST00000345005 INAFM1C9JVW0 142 aa9.59□□□□□ -0.88
CLK3-201ENST00000345005 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.59□□□□□ -0.88
CLK3-201ENST00000345005 H7C1H1 209 aa9.59□□□□□ -0.88
CLK3-201ENST00000345005 TSPAN13O95857 204 aa9.59□□□□□ -0.88
CLK3-201ENST00000345005 CRYBA4P53673 196 aa9.59□□□□□ -0.88
CLK3-201ENST00000345005 FXYD2P54710 66 aa9.59□□□□□ -0.88
CLK3-201ENST00000345005 FXYD7P58549 80 aa9.59□□□□□ -0.88
CLK3-201ENST00000345005 DLX4Q92988 240 aaPredicted RBP9.59□□□□□ -0.88
CLK3-201ENST00000345005 DUX3Q96PT4 197 aa9.59□□□□□ -0.88
CLK3-201ENST00000345005 NIPBLQ6KC79 2804 aaeCLIP9.58□□□□□ -0.88
CLK3-201ENST00000345005 ZNF575Q86XF7 245 aa9.58□□□□□ -0.88
CLK3-201ENST00000345005 C11orf44Q8N8P7 122 aa9.58□□□□□ -0.88
CLK3-201ENST00000345005 RAX2Q96IS3 184 aa9.58□□□□□ -0.88
CLK3-201ENST00000345005 IGLL5B9A064 214 aa9.57□□□□□ -0.88
CLK3-201ENST00000345005 CCL24O00175 119 aa9.57□□□□□ -0.88
CLK3-201ENST00000345005 FHL3Q13643 280 aa9.57□□□□□ -0.88
CLK3-201ENST00000345005 GTSCR1Q86UQ5 136 aa9.57□□□□□ -0.88
CLK3-201ENST00000345005 CITED2Q99967 270 aaPredicted RBP9.57□□□□□ -0.88
CLK3-201ENST00000345005 C20orf78Q9BR46 151 aa9.57□□□□□ -0.88
CLK3-201ENST00000345005 CYSLTR1Q9Y271 337 aa9.57□□□□□ -0.88
CLK3-201ENST00000345005 TRAV26-1A0A087WT03 109 aa9.56□□□□□ -0.88
CLK3-201ENST00000345005 IGKV2D-26A0A0A0MRZ7 120 aa9.56□□□□□ -0.88
CLK3-201ENST00000345005 TRAV2A0A0B4J234 112 aa9.56□□□□□ -0.88
CLK3-201ENST00000345005 A0A1W2PRX2 142 aa9.56□□□□□ -0.88
CLK3-201ENST00000345005 F6UB75 175 aa9.56□□□□□ -0.88
CLK3-201ENST00000345005 FAM19A4Q96LR4 140 aa9.56□□□□□ -0.88
CLK3-201ENST00000345005 GEMIN7Q9H840 131 aaKnown RBP9.56□□□□□ -0.88
CLK3-201ENST00000345005 NHP2Q9NX24 153 aaKnown RBP9.56□□□□□ -0.88
CLK3-201ENST00000345005 MSRB1Q9NZV6 116 aa9.56□□□□□ -0.88
CLK3-201ENST00000345005 WNK1Q9H4A3 2382 aa9.56□□□□□ -0.88
CLK3-201ENST00000345005 A0A1B0GWB2 263 aa9.56□□□□□ -0.88
CLK3-201ENST00000345005 F8VRH5 84 aa9.56□□□□□ -0.88
CLK3-201ENST00000345005 ZNF688P0C7X2 276 aa9.56□□□□□ -0.88
CLK3-201ENST00000345005 PROK1P58294 105 aa9.56□□□□□ -0.88
CLK3-201ENST00000345005 DEFB1P60022 68 aa9.56□□□□□ -0.88
CLK3-201ENST00000345005 C12orf74Q32Q52 190 aa9.56□□□□□ -0.88
CLK3-201ENST00000345005 ZFAND2AQ8N6M9 145 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 539.2 ms