RNA–Protein interactions for RNA: ENST00000344893.4

AC008543.1-201, humanhuman

TSL 2 BASIC

Gene AC008543.1, Length 3,383 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008543.1-201ENST00000344893 C9orf153Q5TBE3 101 aa6.93□□□□□ -1.3
AC008543.1-201ENST00000344893 LYPD1Q8N2G4 141 aa6.93□□□□□ -1.3
AC008543.1-201ENST00000344893 OR4C13Q8NGP0 309 aa6.93□□□□□ -1.3
AC008543.1-201ENST00000344893 FN1P02751 2386 aaKnown RBP6.93□□□□□ -1.3
AC008543.1-201ENST00000344893 NPFFO15130 113 aa6.92□□□□□ -1.3
AC008543.1-201ENST00000344893 MRPS12O15235 138 aaKnown RBP6.92□□□□□ -1.3
AC008543.1-201ENST00000344893 ZNF833PQ6ZTB9 187 aa6.92□□□□□ -1.3
AC008543.1-201ENST00000344893 RAI1Q7Z5J4 1906 aaPredicted RBP6.92□□□□□ -1.3
AC008543.1-201ENST00000344893 A0A0J9YY99 117 aa6.92□□□□□ -1.3
AC008543.1-201ENST00000344893 ZNF575Q86XF7 245 aa6.92□□□□□ -1.3
AC008543.1-201ENST00000344893 SCGB3A1Q96QR1 104 aa6.92□□□□□ -1.3
AC008543.1-201ENST00000344893 NBPF19A0A087WUL8 3843 aa6.92□□□□□ -1.3
AC008543.1-201ENST00000344893 FBXL19-AS1Q494R0 122 aa6.92□□□□□ -1.3
AC008543.1-201ENST00000344893 Q6ZS46 218 aa6.92□□□□□ -1.3
AC008543.1-201ENST00000344893 SHANK2-AS3Q9BTD1 123 aa6.92□□□□□ -1.3
AC008543.1-201ENST00000344893 H3BMM0 161 aa6.91□□□□□ -1.3
AC008543.1-201ENST00000344893 LGALS9O00182 355 aa6.91□□□□□ -1.3
AC008543.1-201ENST00000344893 IGHV4-39P01824 125 aa6.91□□□□□ -1.3
AC008543.1-201ENST00000344893 TRGV3P03979 118 aa6.91□□□□□ -1.3
AC008543.1-201ENST00000344893 BAALCQ8WXS3 180 aa6.91□□□□□ -1.3
AC008543.1-201ENST00000344893 UBE2WQ96B02 151 aa6.91□□□□□ -1.3
AC008543.1-201ENST00000344893 FAM236AA0A1B0GUQ0 79 aa6.91□□□□□ -1.3
AC008543.1-201ENST00000344893 FAM236BA0A1B0GV22 79 aa6.91□□□□□ -1.3
AC008543.1-201ENST00000344893 NDUFA7O95182 113 aa6.91□□□□□ -1.3
AC008543.1-201ENST00000344893 LHBP01229 141 aa6.91□□□□□ -1.3
AC008543.1-201ENST00000344893 IGLV2-23P01705 113 aa6.91□□□□□ -1.3
AC008543.1-201ENST00000344893 IGHV3-30P01768 117 aa6.91□□□□□ -1.3
AC008543.1-201ENST00000344893 IGHV3-30-5P0DP03 117 aa6.91□□□□□ -1.3
AC008543.1-201ENST00000344893 RPL13AP40429 203 aaKnown RBP6.91□□□□□ -1.3
AC008543.1-201ENST00000344893 LINC01620Q4KN68 170 aa6.91□□□□□ -1.3
AC008543.1-201ENST00000344893 NEXN-AS1Q8NBZ9 246 aa6.91□□□□□ -1.3
AC008543.1-201ENST00000344893 CNFNQ9BYD5 112 aa6.91□□□□□ -1.3
AC008543.1-201ENST00000344893 KLK5Q9Y337 293 aaPredicted RBP6.91□□□□□ -1.3
AC008543.1-201ENST00000344893 NF1P21359 2839 aa6.91□□□□□ -1.3
AC008543.1-201ENST00000344893 HERVK_113P63121 156 aa6.91□□□□□ -1.3
AC008543.1-201ENST00000344893 NRACQ8N912 160 aa6.91□□□□□ -1.3
AC008543.1-201ENST00000344893 SIGLEC9Q9Y336 463 aa6.91□□□□□ -1.3
AC008543.1-201ENST00000344893 TRGV11A0A075B6L2 103 aa6.9□□□□□ -1.3
AC008543.1-201ENST00000344893 H3BRN7 92 aa6.9□□□□□ -1.3
AC008543.1-201ENST00000344893 J3KT08 172 aa6.9□□□□□ -1.3
AC008543.1-201ENST00000344893 WIPF1O43516 503 aa6.9□□□□□ -1.3
AC008543.1-201ENST00000344893 ELANEP08246 267 aa6.9□□□□□ -1.3
AC008543.1-201ENST00000344893 M0R2P5 195 aa6.9□□□□□ -1.31
AC008543.1-201ENST00000344893 LOXP28300 417 aaPredicted RBP6.9□□□□□ -1.31
AC008543.1-201ENST00000344893 VMA21Q3ZAQ7 101 aa6.9□□□□□ -1.31
AC008543.1-201ENST00000344893 BRD3OSQ6XYD6 125 aa6.9□□□□□ -1.31
AC008543.1-201ENST00000344893 J3QKU1 62 aa6.89□□□□□ -1.31
AC008543.1-201ENST00000344893 IGKV1-17P01599 117 aa6.89□□□□□ -1.31
AC008543.1-201ENST00000344893 GATA4P43694 442 aa6.89□□□□□ -1.31
AC008543.1-201ENST00000344893 ATXN8Q156A1 80 aa6.89□□□□□ -1.31
AC008543.1-201ENST00000344893 BEX4Q9NWD9 120 aaPredicted RBP6.89□□□□□ -1.31
AC008543.1-201ENST00000344893 A4D1N5 150 aa6.89□□□□□ -1.31
AC008543.1-201ENST00000344893 IGHV3-33P01772 117 aa6.89□□□□□ -1.31
AC008543.1-201ENST00000344893 RPL27AP46776 148 aaKnown RBP6.89□□□□□ -1.31
AC008543.1-201ENST00000344893 LRRC75A-AS1Q8N1F1 130 aa6.89□□□□□ -1.31
AC008543.1-201ENST00000344893 TMEM190Q8WZ59 177 aa6.89□□□□□ -1.31
AC008543.1-201ENST00000344893 TMEM101Q96IK0 257 aa6.89□□□□□ -1.31
AC008543.1-201ENST00000344893 EDA2RQ9HAV5 297 aa6.89□□□□□ -1.31
AC008543.1-201ENST00000344893 Q1RN00 199 aa6.89□□□□□ -1.31
AC008543.1-201ENST00000344893 PVRIGQ6DKI7 326 aa6.89□□□□□ -1.31
AC008543.1-201ENST00000344893 CEMP1Q6PRD7 247 aaPredicted RBP6.89□□□□□ -1.31
AC008543.1-201ENST00000344893 C3orf22Q8N5N4 141 aa6.89□□□□□ -1.31
AC008543.1-201ENST00000344893 DUX5Q96PT3 197 aa6.89□□□□□ -1.31
AC008543.1-201ENST00000344893 IGHV4-30-2A0A087WSY4 118 aa6.88□□□□□ -1.31
AC008543.1-201ENST00000344893 TRBV7-7A0A0K0K1E9 115 aa6.88□□□□□ -1.31
AC008543.1-201ENST00000344893 ZFP36P26651 326 aaKnown RBP6.88□□□□□ -1.31
AC008543.1-201ENST00000344893 PMVKQ15126 192 aa6.88□□□□□ -1.31
AC008543.1-201ENST00000344893 MRGPRG-AS1Q2M3A8 158 aa6.88□□□□□ -1.31
AC008543.1-201ENST00000344893 COX8CQ7Z4L0 72 aa6.88□□□□□ -1.31
AC008543.1-201ENST00000344893 DUX3Q96PT4 197 aa6.88□□□□□ -1.31
AC008543.1-201ENST00000344893 TRBV10-2A0A0K0K1G8 114 aa6.88□□□□□ -1.31
AC008543.1-201ENST00000344893 RBAKDNA6NC62 111 aa6.88□□□□□ -1.31
AC008543.1-201ENST00000344893 HERVK_113P61574 105 aa6.88□□□□□ -1.31
AC008543.1-201ENST00000344893 SLC25A29Q8N8R3 303 aa6.88□□□□□ -1.31
AC008543.1-201ENST00000344893 RNF223E7ERA6 249 aa6.88□□□□□ -1.31
AC008543.1-201ENST00000344893 P0DMU3 169 aa6.88□□□□□ -1.31
AC008543.1-201ENST00000344893 FAM231AP0DMU4 169 aa6.88□□□□□ -1.31
AC008543.1-201ENST00000344893 FAM231CP0DMU5 169 aa6.88□□□□□ -1.31
AC008543.1-201ENST00000344893 IGFL4Q6B9Z1 124 aa6.88□□□□□ -1.31
AC008543.1-201ENST00000344893 C2orf82Q6UX34 121 aa6.88□□□□□ -1.31
AC008543.1-201ENST00000344893 IGHV4-61A0A0C4DH41 118 aa6.87□□□□□ -1.31
AC008543.1-201ENST00000344893 EIF4EBP3O60516 100 aaPredicted RBP6.87□□□□□ -1.31
AC008543.1-201ENST00000344893 IL17RELQ6ZVW7 336 aa6.87□□□□□ -1.31
AC008543.1-201ENST00000344893 TOMM6Q96B49 74 aa6.87□□□□□ -1.31
AC008543.1-201ENST00000344893 RNF125Q96EQ8 232 aa6.87□□□□□ -1.31
AC008543.1-201ENST00000344893 SMIM2Q9BVW6 85 aa6.87□□□□□ -1.31
AC008543.1-201ENST00000344893 KMT2BQ9UMN6 2715 aaPredicted RBP6.87□□□□□ -1.31
AC008543.1-201ENST00000344893 F8P00451 2351 aa6.87□□□□□ -1.31
AC008543.1-201ENST00000344893 ZNF491Q8N8L2 437 aa6.87□□□□□ -1.31
AC008543.1-201ENST00000344893 OR13C6PQ8NH95 151 aa6.87□□□□□ -1.31
AC008543.1-201ENST00000344893 LINC00574Q9H8X3 128 aa6.87□□□□□ -1.31
AC008543.1-201ENST00000344893 BAHCC1Q9P281 2608 aa6.86□□□□□ -1.31
AC008543.1-201ENST00000344893 UQCRQO14949 82 aa6.86□□□□□ -1.31
AC008543.1-201ENST00000344893 ERCC8Q13216 396 aa6.86□□□□□ -1.31
AC008543.1-201ENST00000344893 PDE6HQ13956 83 aa6.86□□□□□ -1.31
AC008543.1-201ENST00000344893 S4R3C0 116 aa6.86□□□□□ -1.31
AC008543.1-201ENST00000344893 C11orf86A6NJI1 115 aa6.86□□□□□ -1.31
AC008543.1-201ENST00000344893 ZNF22P17026 224 aaPredicted RBP6.86□□□□□ -1.31
AC008543.1-201ENST00000344893 CNTFRP26992 372 aa6.86□□□□□ -1.31
AC008543.1-201ENST00000344893 EBI3Q14213 229 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms