RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 ZFP2Q6ZN57 461 aa10.99□□□□□ -0.65
ATG4B-201ENST00000344376 SMCO4Q9NRQ5 59 aa10.99□□□□□ -0.65
ATG4B-201ENST00000344376 TMEM250H0YL14 139 aa10.98□□□□□ -0.65
ATG4B-201ENST00000344376 K7EP13 123 aa10.98□□□□□ -0.65
ATG4B-201ENST00000344376 MED14OSP0DP75 135 aa10.98□□□□□ -0.65
ATG4B-201ENST00000344376 EVI2AP22794 236 aa10.98□□□□□ -0.65
ATG4B-201ENST00000344376 TIRAPP58753 221 aa10.98□□□□□ -0.65
ATG4B-201ENST00000344376 PNRC1Q12796 327 aaPredicted RBP10.98□□□□□ -0.65
ATG4B-201ENST00000344376 LINC01559Q495D7 138 aa10.98□□□□□ -0.65
ATG4B-201ENST00000344376 C15orf54Q8N8G6 183 aa10.98□□□□□ -0.65
ATG4B-201ENST00000344376 PARLQ9H300 379 aa10.98□□□□□ -0.65
ATG4B-201ENST00000344376 PKD1P98161 4303 aa10.98□□□□□ -0.65
ATG4B-201ENST00000344376 PKHD1P08F94 4074 aa10.97□□□□□ -0.65
ATG4B-201ENST00000344376 TMSB15BA0A087X1C1 80 aa10.97□□□□□ -0.65
ATG4B-201ENST00000344376 GRIFINA4D1Z8 144 aa10.97□□□□□ -0.65
ATG4B-201ENST00000344376 COLCA2A8K830 154 aa10.97□□□□□ -0.65
ATG4B-201ENST00000344376 ARMS2P0C7Q2 107 aa10.97□□□□□ -0.65
ATG4B-201ENST00000344376 MEF2BQ02080 365 aaPredicted RBP10.97□□□□□ -0.65
ATG4B-201ENST00000344376 WFDC10BQ8IUB3 73 aa10.97□□□□□ -0.65
ATG4B-201ENST00000344376 PHLDA3Q9Y5J5 127 aa10.97□□□□□ -0.65
ATG4B-201ENST00000344376 A0A087WWC5 75 aa10.96□□□□□ -0.65
ATG4B-201ENST00000344376 RHODO00212 210 aa10.96□□□□□ -0.65
ATG4B-201ENST00000344376 CTAG1AP78358 180 aa10.96□□□□□ -0.65
ATG4B-201ENST00000344376 NFE4Q86UQ8 179 aa10.96□□□□□ -0.65
ATG4B-201ENST00000344376 BAGE2Q86Y30 109 aa10.96□□□□□ -0.65
ATG4B-201ENST00000344376 TRAV8-6A0A0B4J262 113 aa10.95□□□□□ -0.66
ATG4B-201ENST00000344376 C7orf77A4D0Y5 90 aa10.95□□□□□ -0.66
ATG4B-201ENST00000344376 S100A12P80511 92 aa10.95□□□□□ -0.66
ATG4B-201ENST00000344376 ZNF575Q86XF7 245 aa10.95□□□□□ -0.66
ATG4B-201ENST00000344376 C16orf90A8MZG2 172 aa10.94□□□□□ -0.66
ATG4B-201ENST00000344376 DNAH10OSP0CZ25 163 aa10.94□□□□□ -0.66
ATG4B-201ENST00000344376 DMRTA1Q5VZB9 504 aa10.94□□□□□ -0.66
ATG4B-201ENST00000344376 ZFP82Q8N141 532 aa10.94□□□□□ -0.66
ATG4B-201ENST00000344376 C10orf126Q8N4M7 172 aa10.94□□□□□ -0.66
ATG4B-201ENST00000344376 OR10J3Q5JRS4 329 aa10.94□□□□□ -0.66
ATG4B-201ENST00000344376 RPS10P5Q9NQ39 176 aa10.94□□□□□ -0.66
ATG4B-201ENST00000344376 DNAH11Q96DT5 4516 aa10.93□□□□□ -0.66
ATG4B-201ENST00000344376 M0R381 172 aa10.93□□□□□ -0.66
ATG4B-201ENST00000344376 PDE6DO43924 150 aa10.93□□□□□ -0.66
ATG4B-201ENST00000344376 CRYGDP07320 174 aa10.93□□□□□ -0.66
ATG4B-201ENST00000344376 RPL35P42766 123 aaKnown RBP10.93□□□□□ -0.66
ATG4B-201ENST00000344376 RAB5BP61020 215 aa10.93□□□□□ -0.66
ATG4B-201ENST00000344376 ATP6V0E2Q8NHE4 81 aa10.93□□□□□ -0.66
ATG4B-201ENST00000344376 C11orf52Q96A22 123 aa10.93□□□□□ -0.66
ATG4B-201ENST00000344376 MLST8Q9BVC4 326 aa10.93□□□□□ -0.66
ATG4B-201ENST00000344376 GTSF1LQ9H1H1 148 aa10.93□□□□□ -0.66
ATG4B-201ENST00000344376 SCRT2Q9NQ03 307 aa10.93□□□□□ -0.66
ATG4B-201ENST00000344376 MSRB1Q9NZV6 116 aa10.93□□□□□ -0.66
ATG4B-201ENST00000344376 HERC2O95714 4834 aa10.93□□□□□ -0.66
ATG4B-201ENST00000344376 IGHV3-38A0A0C4DH36 116 aa10.92□□□□□ -0.66
ATG4B-201ENST00000344376 FAM74A4Q5TZK3 123 aa10.92□□□□□ -0.66
ATG4B-201ENST00000344376 PRR27Q6MZM9 219 aa10.92□□□□□ -0.66
ATG4B-201ENST00000344376 SPATA12Q7Z6I5 190 aa10.92□□□□□ -0.66
ATG4B-201ENST00000344376 JPT2Q9H910 190 aa10.92□□□□□ -0.66
ATG4B-201ENST00000344376 GAGE12JA6NER3 117 aa10.91□□□□□ -0.66
ATG4B-201ENST00000344376 EREGO14944 169 aa10.91□□□□□ -0.66
ATG4B-201ENST00000344376 MT-ND4LP03901 98 aa10.91□□□□□ -0.66
ATG4B-201ENST00000344376 CXCL1P09341 107 aa10.91□□□□□ -0.66
ATG4B-201ENST00000344376 GAGE1Q13065 139 aa10.91□□□□□ -0.66
ATG4B-201ENST00000344376 GAGE4Q13068 117 aa10.91□□□□□ -0.66
ATG4B-201ENST00000344376 GAGE5Q13069 117 aa10.91□□□□□ -0.66
ATG4B-201ENST00000344376 GAGE13Q4V321 117 aa10.91□□□□□ -0.66
ATG4B-201ENST00000344376 LELP1Q5T871 98 aa10.91□□□□□ -0.66
ATG4B-201ENST00000344376 UFSP1Q6NVU6 142 aa10.91□□□□□ -0.66
ATG4B-201ENST00000344376 Q6ZRN7 208 aaPredicted RBP10.91□□□□□ -0.66
ATG4B-201ENST00000344376 Q6ZSN1 163 aa10.91□□□□□ -0.66
ATG4B-201ENST00000344376 SFRP2Q96HF1 295 aa10.91□□□□□ -0.66
ATG4B-201ENST00000344376 SAMD10Q9BYL1 202 aa10.91□□□□□ -0.66
ATG4B-201ENST00000344376 TMEM242Q9NWH2 141 aa10.91□□□□□ -0.66
ATG4B-201ENST00000344376 KIAA1109Q2LD37 5005 aa10.9□□□□□ -0.66
ATG4B-201ENST00000344376 ERVFC1-1P60608 527 aa10.9□□□□□ -0.66
ATG4B-201ENST00000344376 C12orf57Q99622 126 aa10.9□□□□□ -0.66
ATG4B-201ENST00000344376 NAT8Q9UHE5 227 aa10.9□□□□□ -0.66
ATG4B-201ENST00000344376 ZNF727A8MUV8 499 aa10.9□□□□□ -0.67
ATG4B-201ENST00000344376 C1orf196B1AJZ1 125 aa10.9□□□□□ -0.67
ATG4B-201ENST00000344376 CEBPGP53567 150 aa10.9□□□□□ -0.67
ATG4B-201ENST00000344376 RPL19P84098 196 aaKnown RBP10.9□□□□□ -0.67
ATG4B-201ENST00000344376 LINC01556Q5JQF7 62 aa10.9□□□□□ -0.67
ATG4B-201ENST00000344376 DYNC1H1Q14204 4646 aaKnown RBP10.89□□□□□ -0.67
ATG4B-201ENST00000344376 A0A087WWL8 130 aa10.89□□□□□ -0.67
ATG4B-201ENST00000344376 C5orf52A6NGY3 159 aa10.89□□□□□ -0.67
ATG4B-201ENST00000344376 S100A8P05109 93 aa10.89□□□□□ -0.67
ATG4B-201ENST00000344376 AKR1D1P51857 326 aa10.89□□□□□ -0.67
ATG4B-201ENST00000344376 CENPWQ5EE01 88 aa10.89□□□□□ -0.67
ATG4B-201ENST00000344376 C14orf178Q8N769 122 aaPredicted RBP10.89□□□□□ -0.67
ATG4B-201ENST00000344376 SMIM7Q9BQ49 75 aa10.89□□□□□ -0.67
ATG4B-201ENST00000344376 DERL1Q9BUN8 251 aa10.89□□□□□ -0.67
ATG4B-201ENST00000344376 LINC00694P0DN24 101 aa10.88□□□□□ -0.67
ATG4B-201ENST00000344376 DAZAP1Q96EP5 407 aaKnown RBP10.88□□□□□ -0.67
ATG4B-201ENST00000344376 CTDSP1Q9GZU7 261 aa10.88□□□□□ -0.67
ATG4B-201ENST00000344376 TNFRSF18Q9Y5U5 241 aa10.88□□□□□ -0.67
ATG4B-201ENST00000344376 SMIM6P0DI80 62 aa10.87□□□□□ -0.67
ATG4B-201ENST00000344376 GNG4P50150 75 aa10.87□□□□□ -0.67
ATG4B-201ENST00000344376 TMEM241Q24JQ0 296 aa10.87□□□□□ -0.67
ATG4B-201ENST00000344376 SMIM12Q96EX1 92 aa10.87□□□□□ -0.67
ATG4B-201ENST00000344376 SNAI2O43623 268 aa10.86□□□□□ -0.67
ATG4B-201ENST00000344376 OR5AL1P0C617 328 aa10.86□□□□□ -0.67
ATG4B-201ENST00000344376 SPANXN1Q5VSR9 72 aa10.86□□□□□ -0.67
ATG4B-201ENST00000344376 OR10AG1Q8NH19 301 aa10.86□□□□□ -0.67
ATG4B-201ENST00000344376 YPEL4Q96NS1 127 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms