RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 LGALS1P09382 135 aaKnown RBP5.52□□□□□ -1.53
VCAN-202ENST00000342785 FOXI2Q6ZQN5 318 aa5.52□□□□□ -1.53
VCAN-202ENST00000342785 NUP210LQ5VU65 1888 aa5.52□□□□□ -1.53
VCAN-202ENST00000342785 IGLC6P0CF74 106 aa5.52□□□□□ -1.53
VCAN-202ENST00000342785 DEFB136Q30KP8 78 aa5.52□□□□□ -1.53
VCAN-202ENST00000342785 C6orf226Q5I0X4 101 aa5.52□□□□□ -1.53
VCAN-202ENST00000342785 Q96MF0 132 aa5.52□□□□□ -1.53
VCAN-202ENST00000342785 NCKAP5O14513 1909 aa5.52□□□□□ -1.53
VCAN-202ENST00000342785 TRAV8-4A0A0B4J246 113 aa5.52□□□□□ -1.53
VCAN-202ENST00000342785 TRBV12-3P01733 135 aa5.52□□□□□ -1.53
VCAN-202ENST00000342785 ODF1Q14990 250 aa5.52□□□□□ -1.53
VCAN-202ENST00000342785 NRGNQ92686 78 aa5.52□□□□□ -1.53
VCAN-202ENST00000342785 TRAV8-3A0A0A6YYJ7 113 aa5.52□□□□□ -1.53
VCAN-202ENST00000342785 EML5Q05BV3 1969 aa5.51□□□□□ -1.53
VCAN-202ENST00000342785 VWC2LB2RUY7 222 aa5.51□□□□□ -1.53
VCAN-202ENST00000342785 MALP21145 153 aa5.51□□□□□ -1.53
VCAN-202ENST00000342785 LINC00310P59036 64 aa5.51□□□□□ -1.53
VCAN-202ENST00000342785 RNASE13Q5GAN3 156 aaKnown RBP5.51□□□□□ -1.53
VCAN-202ENST00000342785 A0A0J9YXV3 536 aa5.51□□□□□ -1.53
VCAN-202ENST00000342785 CRPP02741 224 aa5.51□□□□□ -1.53
VCAN-202ENST00000342785 CRIP1P50238 77 aa5.51□□□□□ -1.53
VCAN-202ENST00000342785 SRSF2Q01130 221 aaKnown RBP5.51□□□□□ -1.53
VCAN-202ENST00000342785 EBI3Q14213 229 aa5.51□□□□□ -1.53
VCAN-202ENST00000342785 ZFP2Q6ZN57 461 aa5.51□□□□□ -1.53
VCAN-202ENST00000342785 ANAPC13Q9BS18 74 aa5.51□□□□□ -1.53
VCAN-202ENST00000342785 SUMO4Q6EEV6 95 aa5.51□□□□□ -1.53
VCAN-202ENST00000342785 HCFC1P51610 2035 aa5.51□□□□□ -1.53
VCAN-202ENST00000342785 IGLL5B9A064 214 aa5.51□□□□□ -1.53
VCAN-202ENST00000342785 FGF6P10767 208 aa5.51□□□□□ -1.53
VCAN-202ENST00000342785 AZU1P20160 251 aa5.51□□□□□ -1.53
VCAN-202ENST00000342785 CFHR3Q02985 330 aa5.51□□□□□ -1.53
VCAN-202ENST00000342785 RHOHQ15669 191 aa5.51□□□□□ -1.53
VCAN-202ENST00000342785 IGLV2-11P01706 119 aa5.5□□□□□ -1.53
VCAN-202ENST00000342785 SPINK8P0C7L1 97 aa5.5□□□□□ -1.53
VCAN-202ENST00000342785 K7EMT4 169 aa5.5□□□□□ -1.53
VCAN-202ENST00000342785 PPDPFLQ8WWR9 84 aa5.5□□□□□ -1.53
VCAN-202ENST00000342785 LRP4O75096 1905 aa5.5□□□□□ -1.53
VCAN-202ENST00000342785 GAGE7O76087 117 aa5.5□□□□□ -1.53
VCAN-202ENST00000342785 GAGE12FP0CL80 117 aa5.5□□□□□ -1.53
VCAN-202ENST00000342785 GAGE12GP0CL81 117 aa5.5□□□□□ -1.53
VCAN-202ENST00000342785 GAGE12IP0CL82 117 aa5.5□□□□□ -1.53
VCAN-202ENST00000342785 RPL39P62891 51 aaKnown RBP5.5□□□□□ -1.53
VCAN-202ENST00000342785 HIGD1BQ9P298 99 aa5.5□□□□□ -1.53
VCAN-202ENST00000342785 TEX48A0A1B0GUV7 120 aa5.5□□□□□ -1.53
VCAN-202ENST00000342785 ZFAND6Q6FIF0 208 aa5.49□□□□□ -1.53
VCAN-202ENST00000342785 KMT2EQ8IZD2 1858 aa5.49□□□□□ -1.53
VCAN-202ENST00000342785 CKS1BP61024 79 aa5.49□□□□□ -1.53
VCAN-202ENST00000342785 GPHB5Q86YW7 130 aa5.49□□□□□ -1.53
VCAN-202ENST00000342785 Q8N1Y9 231 aa5.49□□□□□ -1.53
VCAN-202ENST00000342785 JPT2Q9H910 190 aa5.49□□□□□ -1.53
VCAN-202ENST00000342785 DSCAMO60469 2012 aa5.49□□□□□ -1.53
VCAN-202ENST00000342785 C11orf68Q9H3H3 251 aaKnown RBP5.49□□□□□ -1.53
VCAN-202ENST00000342785 SH2D6Q7Z4S9 175 aa5.49□□□□□ -1.53
VCAN-202ENST00000342785 TRAV12-1A0A0B4J245 112 aa5.49□□□□□ -1.53
VCAN-202ENST00000342785 SLURP1P55000 103 aa5.49□□□□□ -1.53
VCAN-202ENST00000342785 LEPROTO15243 131 aa5.49□□□□□ -1.53
VCAN-202ENST00000342785 GATD1Q8NB37 220 aa5.49□□□□□ -1.53
VCAN-202ENST00000342785 GAGE12HA6NDE8 117 aa5.48□□□□□ -1.53
VCAN-202ENST00000342785 TNFRSF13BO14836 293 aaPredicted RBP5.48□□□□□ -1.53
VCAN-202ENST00000342785 CFC1BP0CG36 223 aa5.48□□□□□ -1.53
VCAN-202ENST00000342785 CFC1P0CG37 223 aa5.48□□□□□ -1.53
VCAN-202ENST00000342785 ZFAND3Q9H8U3 227 aa5.48□□□□□ -1.53
VCAN-202ENST00000342785 U3KQE9 123 aa5.48□□□□□ -1.53
VCAN-202ENST00000342785 TANC2Q9HCD6 1990 aa5.48□□□□□ -1.53
VCAN-202ENST00000342785 KIAA1549Q9HCM3 1950 aa5.48□□□□□ -1.53
VCAN-202ENST00000342785 A6NDX4 124 aa5.48□□□□□ -1.53
VCAN-202ENST00000342785 C11orf86A6NJI1 115 aa5.48□□□□□ -1.53
VCAN-202ENST00000342785 C19orf84I3L1E1 186 aa5.48□□□□□ -1.53
VCAN-202ENST00000342785 IGF1P05019 195 aa5.48□□□□□ -1.53
VCAN-202ENST00000342785 APRG1Q8IVJ8 170 aa5.48□□□□□ -1.53
VCAN-202ENST00000342785 ACANP16112 2415 aa5.48□□□□□ -1.53
VCAN-202ENST00000342785 TMEM243Q9BU79 118 aa5.48□□□□□ -1.53
VCAN-202ENST00000342785 HTTP42858 3142 aa5.48□□□□□ -1.53
VCAN-202ENST00000342785 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.47□□□□□ -1.53
VCAN-202ENST00000342785 IGKV2-29A2NJV5 120 aaPredicted RBP5.47□□□□□ -1.53
VCAN-202ENST00000342785 MED14OSP0DP75 135 aa5.47□□□□□ -1.53
VCAN-202ENST00000342785 IGHV4OR15-8A0A075B7B6 117 aa5.47□□□□□ -1.53
VCAN-202ENST00000342785 A0A087WW49 117 aa5.47□□□□□ -1.53
VCAN-202ENST00000342785 SLC25A20O43772 301 aa5.47□□□□□ -1.53
VCAN-202ENST00000342785 SPAG8Q99932 426 aaPredicted RBP5.47□□□□□ -1.53
VCAN-202ENST00000342785 SMAD5-AS1Q9Y6J3 95 aa5.47□□□□□ -1.53
VCAN-202ENST00000342785 A0A0J9YX75 114 aa5.47□□□□□ -1.53
VCAN-202ENST00000342785 PFN2P35080 140 aa5.47□□□□□ -1.53
VCAN-202ENST00000342785 MDFICQ9P1T7 246 aa5.47□□□□□ -1.53
VCAN-202ENST00000342785 E9PLD3 99 aa5.47□□□□□ -1.53
VCAN-202ENST00000342785 GAGE6Q13070 117 aa5.47□□□□□ -1.53
VCAN-202ENST00000342785 WFDC2Q14508 124 aa5.47□□□□□ -1.53
VCAN-202ENST00000342785 S100A7L2Q5SY68 101 aa5.47□□□□□ -1.53
VCAN-202ENST00000342785 TIMM17AQ99595 171 aa5.47□□□□□ -1.53
VCAN-202ENST00000342785 TNRC6AQ8NDV7 1962 aaKnown RBP5.47□□□□□ -1.53
VCAN-202ENST00000342785 A4D1N5 150 aa5.47□□□□□ -1.53
VCAN-202ENST00000342785 BAALCQ8WXS3 180 aa5.47□□□□□ -1.53
VCAN-202ENST00000342785 TOMM6Q96B49 74 aa5.47□□□□□ -1.53
VCAN-202ENST00000342785 C11orf71Q6IPW1 123 aa5.46□□□□□ -1.53
VCAN-202ENST00000342785 Q8N6K4 173 aa5.46□□□□□ -1.53
VCAN-202ENST00000342785 PRB1P04280 392 aa5.46□□□□□ -1.53
VCAN-202ENST00000342785 TMEM61Q8N0U2 210 aa5.46□□□□□ -1.53
VCAN-202ENST00000342785 NTN5Q8WTR8 489 aaPredicted RBP5.46□□□□□ -1.53
VCAN-202ENST00000342785 PRRC2AP48634 2157 aaKnown RBP5.46□□□□□ -1.54
VCAN-202ENST00000342785 CHD9Q3L8U1 2897 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms