RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 G3V4G9 280 aa9.53□□□□□ -0.88
SNRNP48-201ENST00000342415 IGLC6P0CF74 106 aa9.53□□□□□ -0.88
SNRNP48-201ENST00000342415 NBL1P41271 181 aa9.53□□□□□ -0.88
SNRNP48-201ENST00000342415 C11orf68Q9H3H3 251 aaKnown RBP9.53□□□□□ -0.88
SNRNP48-201ENST00000342415 ADAMTS20P59510 1910 aa9.52□□□□□ -0.88
SNRNP48-201ENST00000342415 TRGV1A0A0A0MS02 117 aa9.52□□□□□ -0.89
SNRNP48-201ENST00000342415 NDUFA4O00483 81 aa9.52□□□□□ -0.89
SNRNP48-201ENST00000342415 DNAL4O96015 105 aa9.52□□□□□ -0.89
SNRNP48-201ENST00000342415 ZFAND6Q6FIF0 208 aa9.52□□□□□ -0.89
SNRNP48-201ENST00000342415 CCDC140Q96MF4 163 aa9.52□□□□□ -0.89
SNRNP48-201ENST00000342415 XCL2Q9UBD3 114 aa9.52□□□□□ -0.89
SNRNP48-201ENST00000342415 PRO1854Q9UHT4 67 aa9.52□□□□□ -0.89
SNRNP48-201ENST00000342415 ADORA2A-AS1P86434 159 aa9.52□□□□□ -0.89
SNRNP48-201ENST00000342415 AJUBAQ96IF1 538 aa9.52□□□□□ -0.89
SNRNP48-201ENST00000342415 TRAV8-4A0A0B4J246 113 aa9.52□□□□□ -0.89
SNRNP48-201ENST00000342415 C11orf21Q9P2W6 132 aa9.52□□□□□ -0.89
SNRNP48-201ENST00000342415 IGHV4-61A0A0C4DH41 118 aa9.51□□□□□ -0.89
SNRNP48-201ENST00000342415 A0A0J9YXV3 536 aa9.51□□□□□ -0.89
SNRNP48-201ENST00000342415 RNF223E7ERA6 249 aa9.51□□□□□ -0.89
SNRNP48-201ENST00000342415 DEFB136Q30KP8 78 aa9.51□□□□□ -0.89
SNRNP48-201ENST00000342415 C11orf86A6NJI1 115 aa9.51□□□□□ -0.89
SNRNP48-201ENST00000342415 C20orf78Q9BR46 151 aa9.51□□□□□ -0.89
SNRNP48-201ENST00000342415 TRGV11A0A075B6L2 103 aa9.51□□□□□ -0.89
SNRNP48-201ENST00000342415 B4DSR2 109 aa9.51□□□□□ -0.89
SNRNP48-201ENST00000342415 GATD1Q8NB37 220 aa9.51□□□□□ -0.89
SNRNP48-201ENST00000342415 RNF185Q96GF1 192 aa9.51□□□□□ -0.89
SNRNP48-201ENST00000342415 IGHV7-4-1A0A0J9YVY3 117 aa9.5□□□□□ -0.89
SNRNP48-201ENST00000342415 FSTL3O95633 263 aa9.5□□□□□ -0.89
SNRNP48-201ENST00000342415 BAALCQ8WXS3 180 aa9.5□□□□□ -0.89
SNRNP48-201ENST00000342415 TRBV7-9A0A0J9YWB2 115 aa9.5□□□□□ -0.89
SNRNP48-201ENST00000342415 CDSNQ15517 529 aa9.5□□□□□ -0.89
SNRNP48-201ENST00000342415 C10orf126Q8N4M7 172 aa9.5□□□□□ -0.89
SNRNP48-201ENST00000342415 SUMO4Q6EEV6 95 aa9.5□□□□□ -0.89
SNRNP48-201ENST00000342415 STHQ8IWL8 128 aa9.5□□□□□ -0.89
SNRNP48-201ENST00000342415 PLEKHB2Q96CS7 222 aa9.5□□□□□ -0.89
SNRNP48-201ENST00000342415 IGHV1OR15-1A0A075B7D0 117 aa9.49□□□□□ -0.89
SNRNP48-201ENST00000342415 MSMBP08118 114 aa9.49□□□□□ -0.89
SNRNP48-201ENST00000342415 CFHR3Q02985 330 aa9.49□□□□□ -0.89
SNRNP48-201ENST00000342415 ZFP2Q6ZN57 461 aa9.49□□□□□ -0.89
SNRNP48-201ENST00000342415 NTN5Q8WTR8 489 aaPredicted RBP9.49□□□□□ -0.89
SNRNP48-201ENST00000342415 IGHV4-59P01825 116 aa9.49□□□□□ -0.89
SNRNP48-201ENST00000342415 LY6G5BQ8NDX9 201 aa9.49□□□□□ -0.89
SNRNP48-201ENST00000342415 A4D1N5 150 aa9.49□□□□□ -0.89
SNRNP48-201ENST00000342415 RBAKDNA6NC62 111 aa9.49□□□□□ -0.89
SNRNP48-201ENST00000342415 SLC25A20O43772 301 aa9.49□□□□□ -0.89
SNRNP48-201ENST00000342415 TRPT1Q86TN4 253 aaKnown RBP9.49□□□□□ -0.89
SNRNP48-201ENST00000342415 SPAG8Q99932 426 aaPredicted RBP9.49□□□□□ -0.89
SNRNP48-201ENST00000342415 KALRNO60229 2985 aa9.49□□□□□ -0.89
SNRNP48-201ENST00000342415 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.49□□□□□ -0.89
SNRNP48-201ENST00000342415 TRBV6-1A0A0K0K1D8 114 aa9.49□□□□□ -0.89
SNRNP48-201ENST00000342415 TAL2Q16559 108 aa9.49□□□□□ -0.89
SNRNP48-201ENST00000342415 TCTEX1D4Q5JR98 221 aa9.49□□□□□ -0.89
SNRNP48-201ENST00000342415 C5orf56Q8N8D9 126 aa9.49□□□□□ -0.89
SNRNP48-201ENST00000342415 PPDPFLQ8WWR9 84 aa9.49□□□□□ -0.89
SNRNP48-201ENST00000342415 ATP6V0BQ99437 205 aa9.49□□□□□ -0.89
SNRNP48-201ENST00000342415 TRBV20-1A0A075B6N2 111 aa9.48□□□□□ -0.89
SNRNP48-201ENST00000342415 LGALS1P09382 135 aaKnown RBP9.48□□□□□ -0.89
SNRNP48-201ENST00000342415 NDUFA12Q9UI09 145 aa9.48□□□□□ -0.89
SNRNP48-201ENST00000342415 A0A096LNJ9 63 aa9.48□□□□□ -0.89
SNRNP48-201ENST00000342415 C16orf54Q6UWD8 224 aa9.48□□□□□ -0.89
SNRNP48-201ENST00000342415 DAND5Q8N907 189 aa9.48□□□□□ -0.89
SNRNP48-201ENST00000342415 MDFICQ9P1T7 246 aa9.48□□□□□ -0.89
SNRNP48-201ENST00000342415 LY6LH3BQJ8 138 aa9.48□□□□□ -0.89
SNRNP48-201ENST00000342415 LOC400499M0QZD8 3231 aa9.47□□□□□ -0.89
SNRNP48-201ENST00000342415 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.47□□□□□ -0.89
SNRNP48-201ENST00000342415 IGKV2-29A2NJV5 120 aaPredicted RBP9.47□□□□□ -0.89
SNRNP48-201ENST00000342415 CEMP1Q6PRD7 247 aaPredicted RBP9.47□□□□□ -0.89
SNRNP48-201ENST00000342415 HIGD1BQ9P298 99 aa9.47□□□□□ -0.89
SNRNP48-201ENST00000342415 DMXL2Q8TDJ6 3036 aa9.47□□□□□ -0.89
SNRNP48-201ENST00000342415 ATXN8Q156A1 80 aa9.47□□□□□ -0.89
SNRNP48-201ENST00000342415 PRIMA1Q86XR5 153 aa9.47□□□□□ -0.89
SNRNP48-201ENST00000342415 I3L3M4 83 aa9.47□□□□□ -0.89
SNRNP48-201ENST00000342415 TMEM101Q96IK0 257 aa9.47□□□□□ -0.89
SNRNP48-201ENST00000342415 YAE1D1Q9NRH1 226 aa9.47□□□□□ -0.89
SNRNP48-201ENST00000342415 PRB1P04280 392 aa9.46□□□□□ -0.89
SNRNP48-201ENST00000342415 SCGB1A1P11684 91 aa9.46□□□□□ -0.89
SNRNP48-201ENST00000342415 C9orf47Q6ZRZ4 202 aa9.46□□□□□ -0.89
SNRNP48-201ENST00000342415 RASL10AQ92737 203 aa9.46□□□□□ -0.89
SNRNP48-201ENST00000342415 C20orf173Q96LM9 149 aa9.46□□□□□ -0.89
SNRNP48-201ENST00000342415 CHCHD5Q9BSY4 110 aa9.46□□□□□ -0.9
SNRNP48-201ENST00000342415 INSL3P51460 131 aa9.45□□□□□ -0.9
SNRNP48-201ENST00000342415 LINC00158P58513 81 aa9.45□□□□□ -0.9
SNRNP48-201ENST00000342415 Q8N1Y9 231 aa9.45□□□□□ -0.9
SNRNP48-201ENST00000342415 TMEM141Q96I45 108 aa9.45□□□□□ -0.9
SNRNP48-201ENST00000342415 SIRPDQ9H106 197 aa9.45□□□□□ -0.9
SNRNP48-201ENST00000342415 PCSK5Q92824 1860 aa9.45□□□□□ -0.9
SNRNP48-201ENST00000342415 RPL35AP18077 110 aaKnown RBP9.45□□□□□ -0.9
SNRNP48-201ENST00000342415 PRR9Q5T870 116 aa9.45□□□□□ -0.9
SNRNP48-201ENST00000342415 HIST2H2BDQ6DRA6 164 aa9.45□□□□□ -0.9
SNRNP48-201ENST00000342415 MUSTN1Q8IVN3 82 aa9.45□□□□□ -0.9
SNRNP48-201ENST00000342415 ZNRF2Q8NHG8 242 aa9.45□□□□□ -0.9
SNRNP48-201ENST00000342415 IGHV4-30-2A0A087WSY4 118 aa9.45□□□□□ -0.9
SNRNP48-201ENST00000342415 MRGPRG-AS1Q2M3A8 158 aa9.45□□□□□ -0.9
SNRNP48-201ENST00000342415 ZFAND3Q9H8U3 227 aa9.45□□□□□ -0.9
SNRNP48-201ENST00000342415 TRGV4A0A0C4DH28 118 aa9.44□□□□□ -0.9
SNRNP48-201ENST00000342415 ODF3BA8MYP8 253 aa9.44□□□□□ -0.9
SNRNP48-201ENST00000342415 CFC1BP0CG36 223 aa9.44□□□□□ -0.9
SNRNP48-201ENST00000342415 CFC1P0CG37 223 aa9.44□□□□□ -0.9
SNRNP48-201ENST00000342415 GAGE12JA6NER3 117 aa9.44□□□□□ -0.9
SNRNP48-201ENST00000342415 E9PLD3 99 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms