RNA–Protein interactions for RNA: ENST00000341441.9

MEST-202, mesoderm specific transcript, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene MEST, Length 2,443 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEST-202ENST00000341441 SPANXB1Q9NS25 103 aaPredicted RBP12.77□□□□□ -0.37
MEST-202ENST00000341441 SDHAF1A6NFY7 115 aa12.76□□□□□ -0.37
MEST-202ENST00000341441 PMVKQ15126 192 aa12.76□□□□□ -0.37
MEST-202ENST00000341441 CELSR2Q9HCU4 2923 aa12.76□□□□□ -0.37
MEST-202ENST00000341441 ZNF688P0C7X2 276 aa12.76□□□□□ -0.37
MEST-202ENST00000341441 PSMB8P28062 276 aa12.76□□□□□ -0.37
MEST-202ENST00000341441 SAMD13Q5VXD3 122 aa12.76□□□□□ -0.37
MEST-202ENST00000341441 LINC01549A6NIU2 74 aa12.75□□□□□ -0.37
MEST-202ENST00000341441 FAM74A4Q5TZK3 123 aa12.75□□□□□ -0.37
MEST-202ENST00000341441 CSPG4Q6UVK1 2322 aa12.75□□□□□ -0.37
MEST-202ENST00000341441 IGKV3-20P01619 116 aa12.74□□□□□ -0.37
MEST-202ENST00000341441 PAPPA-AS1Q5QFB9 102 aa12.74□□□□□ -0.37
MEST-202ENST00000341441 C10orf99Q6UWK7 81 aa12.74□□□□□ -0.37
MEST-202ENST00000341441 TMEM141Q96I45 108 aa12.74□□□□□ -0.37
MEST-202ENST00000341441 MDFICQ9P1T7 246 aa12.74□□□□□ -0.37
MEST-202ENST00000341441 TRAV12-2A0A075B6T6 113 aa12.74□□□□□ -0.37
MEST-202ENST00000341441 IGHV3-16A0A0C4DH30 117 aa12.74□□□□□ -0.37
MEST-202ENST00000341441 LGALS9O00182 355 aa12.74□□□□□ -0.37
MEST-202ENST00000341441 SRSF9Q13242 221 aaKnown RBP eCLIP12.74□□□□□ -0.37
MEST-202ENST00000341441 C9orf85Q96MD7 179 aa12.74□□□□□ -0.37
MEST-202ENST00000341441 PGPEP1Q9NXJ5 209 aa12.74□□□□□ -0.37
MEST-202ENST00000341441 TRBV27A0A0K0K1C4 114 aa12.73□□□□□ -0.37
MEST-202ENST00000341441 GAGE13Q4V321 117 aa12.73□□□□□ -0.37
MEST-202ENST00000341441 MTURNQ8N3F0 131 aa12.73□□□□□ -0.37
MEST-202ENST00000341441 TIMM17AQ99595 171 aa12.73□□□□□ -0.37
MEST-202ENST00000341441 CFAP46Q8IYW2 2715 aa12.73□□□□□ -0.37
MEST-202ENST00000341441 A0A0J9YX75 114 aa12.73□□□□□ -0.37
MEST-202ENST00000341441 ETDBQ3ZM63 59 aa12.73□□□□□ -0.37
MEST-202ENST00000341441 SH2D6Q7Z4S9 175 aa12.73□□□□□ -0.37
MEST-202ENST00000341441 PRO0461Q9UI25 63 aa12.73□□□□□ -0.37
MEST-202ENST00000341441 ZNF580Q9UK33 172 aa12.73□□□□□ -0.37
MEST-202ENST00000341441 TRBV6-5A0A0K0K1A5 114 aa12.72□□□□□ -0.37
MEST-202ENST00000341441 TMEM238LA0A1B0GVL6 79 aa12.72□□□□□ -0.37
MEST-202ENST00000341441 A6NJY4 79 aa12.72□□□□□ -0.37
MEST-202ENST00000341441 B4DSR2 109 aa12.72□□□□□ -0.37
MEST-202ENST00000341441 IGHV4-59P01825 116 aa12.72□□□□□ -0.37
MEST-202ENST00000341441 HERVK_113P61574 105 aa12.72□□□□□ -0.37
MEST-202ENST00000341441 UBE2D1P51668 147 aa12.72□□□□□ -0.37
MEST-202ENST00000341441 ODF3Q96PU9 254 aa12.72□□□□□ -0.37
MEST-202ENST00000341441 MRPL16Q9NX20 251 aaKnown RBP12.72□□□□□ -0.37
MEST-202ENST00000341441 ZNF256Q9Y2P7 627 aaPredicted RBP12.72□□□□□ -0.37
MEST-202ENST00000341441 PKD1L2Q7Z442 2459 aa12.71□□□□□ -0.37
MEST-202ENST00000341441 FLNCQ14315 2725 aa12.71□□□□□ -0.37
MEST-202ENST00000341441 Q8N1Y9 231 aa12.71□□□□□ -0.37
MEST-202ENST00000341441 ZNRF2Q8NHG8 242 aa12.71□□□□□ -0.38
MEST-202ENST00000341441 A0A0J9YY99 117 aa12.7□□□□□ -0.38
MEST-202ENST00000341441 M0QY20 66 aa12.7□□□□□ -0.38
MEST-202ENST00000341441 TSPEAR-AS2P59090 65 aa12.7□□□□□ -0.38
MEST-202ENST00000341441 SNRPD3P62318 126 aaKnown RBP12.7□□□□□ -0.38
MEST-202ENST00000341441 ZNF56Q15929 161 aa12.7□□□□□ -0.38
MEST-202ENST00000341441 TMEM170BQ5T4T1 132 aa12.7□□□□□ -0.38
MEST-202ENST00000341441 K7EQG2 157 aa12.7□□□□□ -0.38
MEST-202ENST00000341441 DEFB112Q30KQ8 113 aa12.7□□□□□ -0.38
MEST-202ENST00000341441 ZNF876PQ49A33 203 aa12.7□□□□□ -0.38
MEST-202ENST00000341441 SYT8Q8NBV8 401 aa12.7□□□□□ -0.38
MEST-202ENST00000341441 TMEM238C9JI98 176 aa12.69□□□□□ -0.38
MEST-202ENST00000341441 SPINK13Q1W4C9 94 aa12.69□□□□□ -0.38
MEST-202ENST00000341441 IGHV1OR15-1A0A075B7D0 117 aa12.68□□□□□ -0.38
MEST-202ENST00000341441 SPAG8Q99932 426 aaPredicted RBP12.68□□□□□ -0.38
MEST-202ENST00000341441 CRYBG3Q68DQ2 2970 aa12.68□□□□□ -0.38
MEST-202ENST00000341441 J3QR89 54 aa12.68□□□□□ -0.38
MEST-202ENST00000341441 TSPAN13O95857 204 aa12.68□□□□□ -0.38
MEST-202ENST00000341441 OPRPNQ99935 248 aaPredicted RBP12.68□□□□□ -0.38
MEST-202ENST00000341441 TSSC4Q9Y5U2 329 aaPredicted RBP12.68□□□□□ -0.38
MEST-202ENST00000341441 DOPEY1Q5JWR5 2465 aa12.67□□□□□ -0.38
MEST-202ENST00000341441 APOMO95445 188 aa12.67□□□□□ -0.38
MEST-202ENST00000341441 SYNJ2BPP57105 145 aa12.67□□□□□ -0.38
MEST-202ENST00000341441 SFTA2Q6UW10 78 aa12.67□□□□□ -0.38
MEST-202ENST00000341441 USP9XQ93008 2570 aaPredicted RBP12.67□□□□□ -0.38
MEST-202ENST00000341441 GATA3P23771 443 aa12.66□□□□□ -0.38
MEST-202ENST00000341441 NSUN5P1Q3KNT7 163 aa12.66□□□□□ -0.38
MEST-202ENST00000341441 NRGNQ92686 78 aa12.66□□□□□ -0.38
MEST-202ENST00000341441 AMELXQ99217 191 aa12.66□□□□□ -0.38
MEST-202ENST00000341441 TMEM89A2RUT3 159 aa12.66□□□□□ -0.38
MEST-202ENST00000341441 GAGE12HA6NDE8 117 aa12.66□□□□□ -0.38
MEST-202ENST00000341441 P0DMU3 169 aa12.66□□□□□ -0.38
MEST-202ENST00000341441 FAM231AP0DMU4 169 aa12.66□□□□□ -0.38
MEST-202ENST00000341441 FAM231CP0DMU5 169 aa12.66□□□□□ -0.38
MEST-202ENST00000341441 TRPT1Q86TN4 253 aaKnown RBP12.66□□□□□ -0.38
MEST-202ENST00000341441 NDUFA11Q86Y39 141 aa12.66□□□□□ -0.38
MEST-202ENST00000341441 SLC25A29Q8N8R3 303 aa12.66□□□□□ -0.38
MEST-202ENST00000341441 DLX4Q92988 240 aaPredicted RBP12.66□□□□□ -0.38
MEST-202ENST00000341441 SORL1Q92673 2214 aa12.65□□□□□ -0.38
MEST-202ENST00000341441 LOC107984156A0A0G2JMH3 177 aa12.65□□□□□ -0.38
MEST-202ENST00000341441 RHOHQ15669 191 aa12.65□□□□□ -0.38
MEST-202ENST00000341441 ARL17AQ8IVW1 177 aa12.65□□□□□ -0.38
MEST-202ENST00000341441 GTSF1LQ9H1H1 148 aa12.65□□□□□ -0.38
MEST-202ENST00000341441 J3QQQ9 107 aa12.64□□□□□ -0.39
MEST-202ENST00000341441 IGHV3-30P01768 117 aa12.64□□□□□ -0.39
MEST-202ENST00000341441 IGHV3-30-5P0DP03 117 aa12.64□□□□□ -0.39
MEST-202ENST00000341441 INSL3P51460 131 aa12.64□□□□□ -0.39
MEST-202ENST00000341441 NFE4Q86UQ8 179 aa12.64□□□□□ -0.39
MEST-202ENST00000341441 DUX5Q96PT3 197 aa12.64□□□□□ -0.39
MEST-202ENST00000341441 UTP20O75691 2785 aaKnown RBP12.64□□□□□ -0.39
MEST-202ENST00000341441 SIGMAR1Q99720 223 aa12.64□□□□□ -0.39
MEST-202ENST00000341441 DOPEY2Q9Y3R5 2298 aa12.64□□□□□ -0.39
MEST-202ENST00000341441 AZU1P20160 251 aa12.63□□□□□ -0.39
MEST-202ENST00000341441 CFAP126Q5VTH2 177 aa12.63□□□□□ -0.39
MEST-202ENST00000341441 PSMB2P49721 201 aa12.63□□□□□ -0.39
MEST-202ENST00000341441 SMCPP49901 116 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms