RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 NUDT15Q9NV35 164 aa10.26□□□□□ -0.77
NECTIN1-202ENST00000340882 IL36BQ9NZH7 164 aa10.26□□□□□ -0.77
NECTIN1-202ENST00000340882 SIX6O95475 246 aa10.25□□□□□ -0.77
NECTIN1-202ENST00000340882 PRR3P79522 188 aaKnown RBP10.25□□□□□ -0.77
NECTIN1-202ENST00000340882 FLI1Q01543 452 aaPredicted RBP10.25□□□□□ -0.77
NECTIN1-202ENST00000340882 PRR34Q9NV39 138 aa10.25□□□□□ -0.77
NECTIN1-202ENST00000340882 TRBV7-3A0A075B6L6 115 aa10.24□□□□□ -0.77
NECTIN1-202ENST00000340882 IGHV3-64A0A075B6Q5 118 aa10.24□□□□□ -0.77
NECTIN1-202ENST00000340882 RPL36AP83881 106 aaKnown RBP10.24□□□□□ -0.77
NECTIN1-202ENST00000340882 PQLC2Q6ZP29 291 aa10.24□□□□□ -0.77
NECTIN1-202ENST00000340882 RPL36ALQ969Q0 106 aaKnown RBP10.24□□□□□ -0.77
NECTIN1-202ENST00000340882 SFRP2Q96HF1 295 aa10.24□□□□□ -0.77
NECTIN1-202ENST00000340882 FAT4Q6V0I7 4981 aa10.24□□□□□ -0.77
NECTIN1-202ENST00000340882 MUC21A0A0G2JKD1 596 aa10.23□□□□□ -0.77
NECTIN1-202ENST00000340882 SERTM2A0A1B0GWG4 89 aa10.23□□□□□ -0.77
NECTIN1-202ENST00000340882 hDV102S1A0JD36 115 aa10.23□□□□□ -0.77
NECTIN1-202ENST00000340882 LYRM1O43325 122 aa10.23□□□□□ -0.77
NECTIN1-202ENST00000340882 PTTG1O95997 202 aa10.23□□□□□ -0.77
NECTIN1-202ENST00000340882 ARMS2P0C7Q2 107 aa10.23□□□□□ -0.77
NECTIN1-202ENST00000340882 RAB2AP61019 212 aa10.23□□□□□ -0.77
NECTIN1-202ENST00000340882 ZFP69Q49AA0 526 aa10.23□□□□□ -0.77
NECTIN1-202ENST00000340882 LRRC37A5PQ49AS3 106 aa10.23□□□□□ -0.77
NECTIN1-202ENST00000340882 LINC00269Q8N2A0 174 aa10.23□□□□□ -0.77
NECTIN1-202ENST00000340882 C5orf17Q8NAS9 161 aa10.23□□□□□ -0.77
NECTIN1-202ENST00000340882 CLRN3Q8NCR9 226 aa10.23□□□□□ -0.77
NECTIN1-202ENST00000340882 C7orf33Q8WU49 177 aa10.23□□□□□ -0.77
NECTIN1-202ENST00000340882 IGLV10-54A0A075B6I4 117 aa10.22□□□□□ -0.77
NECTIN1-202ENST00000340882 TRBV10-1A0A0K0K1A3 114 aa10.22□□□□□ -0.77
NECTIN1-202ENST00000340882 KRTAP9-6A0A140TA67 174 aa10.22□□□□□ -0.77
NECTIN1-202ENST00000340882 GRIFINA4D1Z8 144 aa10.22□□□□□ -0.77
NECTIN1-202ENST00000340882 NTM-AS1Q6ZSK4 140 aa10.22□□□□□ -0.77
NECTIN1-202ENST00000340882 GTSF1Q8WW33 167 aa10.22□□□□□ -0.77
NECTIN1-202ENST00000340882 CHCHD5Q9BSY4 110 aa10.22□□□□□ -0.77
NECTIN1-202ENST00000340882 SMIM3Q9BZL3 60 aa10.22□□□□□ -0.77
NECTIN1-202ENST00000340882 TRAV34A0A0B4J273 112 aa10.21□□□□□ -0.77
NECTIN1-202ENST00000340882 ARL14EPLP0DKL9 152 aa10.21□□□□□ -0.77
NECTIN1-202ENST00000340882 RBX1P62877 108 aa10.21□□□□□ -0.77
NECTIN1-202ENST00000340882 OR11H4Q8NGC9 324 aa10.21□□□□□ -0.77
NECTIN1-202ENST00000340882 OR10G8Q8NGN5 311 aa10.21□□□□□ -0.77
NECTIN1-202ENST00000340882 A0A1W2PPV4 95 aa10.2□□□□□ -0.78
NECTIN1-202ENST00000340882 B4DEV8 164 aa10.2□□□□□ -0.78
NECTIN1-202ENST00000340882 H2AFB2P0C5Z0 115 aa10.2□□□□□ -0.78
NECTIN1-202ENST00000340882 CRIP1P50238 77 aa10.2□□□□□ -0.78
NECTIN1-202ENST00000340882 DNLZQ5SXM8 178 aa10.2□□□□□ -0.78
NECTIN1-202ENST00000340882 NEXN-AS1Q8NBZ9 246 aa10.2□□□□□ -0.78
NECTIN1-202ENST00000340882 EPDR1Q9UM22 224 aa10.2□□□□□ -0.78
NECTIN1-202ENST00000340882 FABP5P3A8MUU1 101 aa10.19□□□□□ -0.78
NECTIN1-202ENST00000340882 KRBOX1C9JBD0 128 aa10.19□□□□□ -0.78
NECTIN1-202ENST00000340882 K7EQM0 130 aa10.19□□□□□ -0.78
NECTIN1-202ENST00000340882 M0R036 132 aa10.19□□□□□ -0.78
NECTIN1-202ENST00000340882 M0R381 172 aa10.19□□□□□ -0.78
NECTIN1-202ENST00000340882 SUMO1P63165 101 aaKnown RBP10.19□□□□□ -0.78
NECTIN1-202ENST00000340882 GAGE6Q13070 117 aa10.19□□□□□ -0.78
NECTIN1-202ENST00000340882 SCGB1C1Q8TD33 95 aa10.19□□□□□ -0.78
NECTIN1-202ENST00000340882 WFDC1Q9HC57 220 aa10.19□□□□□ -0.78
NECTIN1-202ENST00000340882 HSPB11Q9Y547 144 aa10.19□□□□□ -0.78
NECTIN1-202ENST00000340882 CCDC160A6NGH7 325 aa10.18□□□□□ -0.78
NECTIN1-202ENST00000340882 COX6A2Q02221 97 aa10.18□□□□□ -0.78
NECTIN1-202ENST00000340882 SAPCD1Q5SSQ6 148 aa10.18□□□□□ -0.78
NECTIN1-202ENST00000340882 LYPD6BQ8NI32 183 aa10.18□□□□□ -0.78
NECTIN1-202ENST00000340882 SUN5Q8TC36 379 aa10.18□□□□□ -0.78
NECTIN1-202ENST00000340882 ARL2-SNX15V9GYD0 113 aa10.18□□□□□ -0.78
NECTIN1-202ENST00000340882 SRSF9Q13242 221 aaKnown RBP eCLIP10.17□□□□□ -0.78
NECTIN1-202ENST00000340882 REG3GQ6UW15 175 aa10.17□□□□□ -0.78
NECTIN1-202ENST00000340882 SPINK6Q6UWN8 80 aa10.17□□□□□ -0.78
NECTIN1-202ENST00000340882 PRSS3P2Q8NHM4 247 aa10.17□□□□□ -0.78
NECTIN1-202ENST00000340882 RBM38Q9H0Z9 239 aaKnown RBP10.17□□□□□ -0.78
NECTIN1-202ENST00000340882 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.16□□□□□ -0.78
NECTIN1-202ENST00000340882 STAG3L2P0CL84 134 aa10.16□□□□□ -0.78
NECTIN1-202ENST00000340882 STAG3L3P0CL85 134 aa10.16□□□□□ -0.78
NECTIN1-202ENST00000340882 GCHFRP30047 84 aa10.16□□□□□ -0.78
NECTIN1-202ENST00000340882 MAJINQ3KP22 176 aa10.16□□□□□ -0.78
NECTIN1-202ENST00000340882 PHLDA3Q9Y5J5 127 aa10.16□□□□□ -0.78
NECTIN1-202ENST00000340882 IGKV2-24A0A0C4DH68 120 aa10.15□□□□□ -0.78
NECTIN1-202ENST00000340882 RAB5CP51148 216 aa10.15□□□□□ -0.78
NECTIN1-202ENST00000340882 REG3AQ06141 175 aa10.15□□□□□ -0.78
NECTIN1-202ENST00000340882 PRR27Q6MZM9 219 aa10.15□□□□□ -0.78
NECTIN1-202ENST00000340882 AP5S1Q9NUS5 200 aa10.15□□□□□ -0.78
NECTIN1-202ENST00000340882 TMSB15BA0A087X1C1 80 aa10.14□□□□□ -0.79
NECTIN1-202ENST00000340882 TPT1P13693 172 aaKnown RBP10.14□□□□□ -0.79
NECTIN1-202ENST00000340882 CDC34P49427 236 aaPredicted RBP10.14□□□□□ -0.79
NECTIN1-202ENST00000340882 STPG4Q8N801 248 aa10.14□□□□□ -0.79
NECTIN1-202ENST00000340882 GFRA4Q9GZZ7 299 aa10.14□□□□□ -0.79
NECTIN1-202ENST00000340882 SH2D1AO60880 128 aa10.13□□□□□ -0.79
NECTIN1-202ENST00000340882 RAB4BP61018 213 aa10.13□□□□□ -0.79
NECTIN1-202ENST00000340882 PKIAP61925 76 aa10.13□□□□□ -0.79
NECTIN1-202ENST00000340882 C20orf203Q8NBC4 194 aa10.13□□□□□ -0.79
NECTIN1-202ENST00000340882 RAB24Q969Q5 203 aa10.13□□□□□ -0.79
NECTIN1-202ENST00000340882 RPL12P30050 165 aaKnown RBP10.12□□□□□ -0.79
NECTIN1-202ENST00000340882 ZNF56Q15929 161 aa10.12□□□□□ -0.79
NECTIN1-202ENST00000340882 Q86TA4 180 aa10.12□□□□□ -0.79
NECTIN1-202ENST00000340882 ZFP82Q8N141 532 aa10.12□□□□□ -0.79
NECTIN1-202ENST00000340882 C15orf56Q8N910 161 aa10.12□□□□□ -0.79
NECTIN1-202ENST00000340882 PPP1R1CQ8WVI7 109 aa10.12□□□□□ -0.79
NECTIN1-202ENST00000340882 H2BFSP57053 126 aa10.11□□□□□ -0.79
NECTIN1-202ENST00000340882 DERL1Q9BUN8 251 aa10.11□□□□□ -0.79
NECTIN1-202ENST00000340882 VAX2Q9UIW0 290 aa10.11□□□□□ -0.79
NECTIN1-202ENST00000340882 IGLV4-60A0A075B6I1 120 aa10.1□□□□□ -0.79
NECTIN1-202ENST00000340882 A0A096LNI7 61 aa10.1□□□□□ -0.79
NECTIN1-202ENST00000340882 TRBV6-1A0A0K0K1D8 114 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms