RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 CXCL1P09341 107 aa9.9□□□□□ -0.82
ERCC1-203ENST00000340192 LINC00694P0DN24 101 aa9.9□□□□□ -0.82
ERCC1-203ENST00000340192 GAGE1Q13065 139 aa9.9□□□□□ -0.82
ERCC1-203ENST00000340192 GAGE4Q13068 117 aa9.9□□□□□ -0.82
ERCC1-203ENST00000340192 GAGE5Q13069 117 aa9.9□□□□□ -0.82
ERCC1-203ENST00000340192 GAGE13Q4V321 117 aa9.9□□□□□ -0.82
ERCC1-203ENST00000340192 OR10J3Q5JRS4 329 aa9.9□□□□□ -0.82
ERCC1-203ENST00000340192 ALKAL2Q6UX46 152 aa9.9□□□□□ -0.82
ERCC1-203ENST00000340192 GTSF1LQ9H1H1 148 aa9.9□□□□□ -0.82
ERCC1-203ENST00000340192 VAX2Q9UIW0 290 aa9.9□□□□□ -0.82
ERCC1-203ENST00000340192 TRAV8-6A0A0B4J262 113 aa9.89□□□□□ -0.83
ERCC1-203ENST00000340192 C16orf90A8MZG2 172 aa9.89□□□□□ -0.83
ERCC1-203ENST00000340192 IGLV2-8P01709 118 aa9.89□□□□□ -0.83
ERCC1-203ENST00000340192 GNG4P50150 75 aa9.89□□□□□ -0.83
ERCC1-203ENST00000340192 LELP1Q5T871 98 aa9.89□□□□□ -0.83
ERCC1-203ENST00000340192 NFE4Q86UQ8 179 aa9.89□□□□□ -0.83
ERCC1-203ENST00000340192 OR10AG1Q8NH19 301 aa9.89□□□□□ -0.83
ERCC1-203ENST00000340192 MED9Q9NWA0 146 aa9.89□□□□□ -0.83
ERCC1-203ENST00000340192 MSRB1Q9NZV6 116 aa9.89□□□□□ -0.83
ERCC1-203ENST00000340192 SNAI2O43623 268 aa9.88□□□□□ -0.83
ERCC1-203ENST00000340192 OR5AL1P0C617 328 aa9.88□□□□□ -0.83
ERCC1-203ENST00000340192 NKX2-5P52952 324 aaPredicted RBP9.88□□□□□ -0.83
ERCC1-203ENST00000340192 LINC01556Q5JQF7 62 aa9.88□□□□□ -0.83
ERCC1-203ENST00000340192 SPATA12Q7Z6I5 190 aa9.88□□□□□ -0.83
ERCC1-203ENST00000340192 C10orf126Q8N4M7 172 aa9.88□□□□□ -0.83
ERCC1-203ENST00000340192 SSBP4Q9BWG4 385 aaPredicted RBP9.88□□□□□ -0.83
ERCC1-203ENST00000340192 TRBV20OR9-2A0A075B6H5 130 aa9.87□□□□□ -0.83
ERCC1-203ENST00000340192 MUC21A0A0G2JKD1 596 aa9.87□□□□□ -0.83
ERCC1-203ENST00000340192 MUC21A0A140T8X8 626 aa9.87□□□□□ -0.83
ERCC1-203ENST00000340192 TAGLN2P37802 199 aaKnown RBP9.87□□□□□ -0.83
ERCC1-203ENST00000340192 DAZAP1Q96EP5 407 aaKnown RBP9.87□□□□□ -0.83
ERCC1-203ENST00000340192 SMIM12Q96EX1 92 aa9.87□□□□□ -0.83
ERCC1-203ENST00000340192 KRTAP10-2P60368 255 aa9.86□□□□□ -0.83
ERCC1-203ENST00000340192 SPANXN1Q5VSR9 72 aa9.86□□□□□ -0.83
ERCC1-203ENST00000340192 BOLA1Q9Y3E2 137 aa9.86□□□□□ -0.83
ERCC1-203ENST00000340192 C19orf71A6NCJ1 209 aa9.85□□□□□ -0.83
ERCC1-203ENST00000340192 IGHV3-30P01768 117 aa9.85□□□□□ -0.83
ERCC1-203ENST00000340192 IGHV3-33P01772 117 aa9.85□□□□□ -0.83
ERCC1-203ENST00000340192 IGHV3-30-3P0DP02 117 aa9.85□□□□□ -0.83
ERCC1-203ENST00000340192 IGHV3-30-5P0DP03 117 aa9.85□□□□□ -0.83
ERCC1-203ENST00000340192 GZMBP10144 247 aa9.85□□□□□ -0.83
ERCC1-203ENST00000340192 ERVFC1-1P60608 527 aa9.85□□□□□ -0.83
ERCC1-203ENST00000340192 SSTP61278 116 aa9.85□□□□□ -0.83
ERCC1-203ENST00000340192 BLOC1S1P78537 153 aa9.85□□□□□ -0.83
ERCC1-203ENST00000340192 OR2D3Q8NGH3 330 aa9.85□□□□□ -0.83
ERCC1-203ENST00000340192 KRTAP17-1Q9BYP8 105 aa9.85□□□□□ -0.83
ERCC1-203ENST00000340192 TRBV10-1A0A0K0K1A3 114 aa9.84□□□□□ -0.83
ERCC1-203ENST00000340192 RAB4BP61018 213 aa9.84□□□□□ -0.83
ERCC1-203ENST00000340192 ZNF56Q15929 161 aa9.84□□□□□ -0.83
ERCC1-203ENST00000340192 LYPD6BQ8NI32 183 aa9.84□□□□□ -0.83
ERCC1-203ENST00000340192 TPPP3Q9BW30 176 aa9.84□□□□□ -0.83
ERCC1-203ENST00000340192 A0A087WWC5 75 aa9.83□□□□□ -0.84
ERCC1-203ENST00000340192 RBFOX3A6NFN3 312 aa9.83□□□□□ -0.84
ERCC1-203ENST00000340192 IBA57-AS1B1ANH7 110 aa9.83□□□□□ -0.84
ERCC1-203ENST00000340192 P01737 135 aa9.83□□□□□ -0.84
ERCC1-203ENST00000340192 IGLC6P0CF74 106 aa9.83□□□□□ -0.84
ERCC1-203ENST00000340192 RPS20P60866 119 aaKnown RBP9.83□□□□□ -0.84
ERCC1-203ENST00000340192 Q8N3U1 123 aa9.83□□□□□ -0.84
ERCC1-203ENST00000340192 FER1L6-AS1Q8NA97 138 aa9.83□□□□□ -0.84
ERCC1-203ENST00000340192 BIN3Q9NQY0 253 aa9.83□□□□□ -0.84
ERCC1-203ENST00000340192 LRP1BQ9NZR2 4599 aa9.82□□□□□ -0.84
ERCC1-203ENST00000340192 EREGO14944 169 aa9.82□□□□□ -0.84
ERCC1-203ENST00000340192 RPL36AP83881 106 aaKnown RBP9.82□□□□□ -0.84
ERCC1-203ENST00000340192 RPL36ALQ969Q0 106 aaKnown RBP9.82□□□□□ -0.84
ERCC1-203ENST00000340192 Q9HAA7 133 aa9.82□□□□□ -0.84
ERCC1-203ENST00000340192 TRBV7-3A0A075B6L6 115 aa9.81□□□□□ -0.84
ERCC1-203ENST00000340192 A0A087WTM6 91 aa9.81□□□□□ -0.84
ERCC1-203ENST00000340192 XKRY2A2RUG3 117 aa9.81□□□□□ -0.84
ERCC1-203ENST00000340192 F5H697 171 aa9.81□□□□□ -0.84
ERCC1-203ENST00000340192 SMIM17P0DL12 118 aa9.81□□□□□ -0.84
ERCC1-203ENST00000340192 UBE2D3P61077 147 aa9.81□□□□□ -0.84
ERCC1-203ENST00000340192 UBE2D2P62837 147 aa9.81□□□□□ -0.84
ERCC1-203ENST00000340192 AP1S3Q96PC3 154 aa9.81□□□□□ -0.84
ERCC1-203ENST00000340192 KIF25-AS1Q9Y6Z4 181 aa9.81□□□□□ -0.84
ERCC1-203ENST00000340192 DNAH5Q8TE73 4624 aa9.81□□□□□ -0.84
ERCC1-203ENST00000340192 TMEM250H0YL14 139 aa9.8□□□□□ -0.84
ERCC1-203ENST00000340192 K7EN84 100 aa9.8□□□□□ -0.84
ERCC1-203ENST00000340192 NEXN-AS1Q8NBZ9 246 aa9.8□□□□□ -0.84
ERCC1-203ENST00000340192 NUDT10Q8NFP7 164 aa9.8□□□□□ -0.84
ERCC1-203ENST00000340192 OR10G8Q8NGN5 311 aa9.8□□□□□ -0.84
ERCC1-203ENST00000340192 OCC1Q8TAD7 63 aa9.8□□□□□ -0.84
ERCC1-203ENST00000340192 NUDT11Q96G61 164 aa9.8□□□□□ -0.84
ERCC1-203ENST00000340192 HSPG2P98160 4391 aa9.8□□□□□ -0.84
ERCC1-203ENST00000340192 F2Z2F3 143 aa9.79□□□□□ -0.84
ERCC1-203ENST00000340192 PSCAO43653 123 aa9.79□□□□□ -0.84
ERCC1-203ENST00000340192 FUSP35637 526 aaKnown RBP eCLIP9.79□□□□□ -0.84
ERCC1-203ENST00000340192 CACNG7P62955 275 aa9.79□□□□□ -0.84
ERCC1-203ENST00000340192 LAGE3Q14657 143 aa9.79□□□□□ -0.84
ERCC1-203ENST00000340192 DAZ4Q86SG3 579 aaKnown RBP9.79□□□□□ -0.84
ERCC1-203ENST00000340192 RNASE7Q9H1E1 156 aaKnown RBP9.79□□□□□ -0.84
ERCC1-203ENST00000340192 DAZ3Q9NR90 486 aaKnown RBP9.79□□□□□ -0.84
ERCC1-203ENST00000340192 RYR1P21817 5038 aa9.79□□□□□ -0.84
ERCC1-203ENST00000340192 CDK2AP2O75956 126 aa9.78□□□□□ -0.84
ERCC1-203ENST00000340192 TOR2AQ5JU69 321 aa9.78□□□□□ -0.84
ERCC1-203ENST00000340192 LYZL1Q6UWQ5 148 aa9.78□□□□□ -0.84
ERCC1-203ENST00000340192 EIF5A2Q9GZV4 153 aaKnown RBP9.78□□□□□ -0.84
ERCC1-203ENST00000340192 RPP21Q9H633 154 aaKnown RBP9.78□□□□□ -0.84
ERCC1-203ENST00000340192 PGPEP1Q9NXJ5 209 aa9.78□□□□□ -0.84
ERCC1-203ENST00000340192 PCLOQ9Y6V0 5065 aa9.77□□□□□ -0.85
ERCC1-203ENST00000340192 CEBPGP53567 150 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms