RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 ATP6V0BQ99437 205 aa11.24□□□□□ -0.61
RET-201ENST00000340058 MDFICQ9P1T7 246 aa11.24□□□□□ -0.61
RET-201ENST00000340058 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.23□□□□□ -0.61
RET-201ENST00000340058 IGKV2-29A2NJV5 120 aaPredicted RBP11.23□□□□□ -0.61
RET-201ENST00000340058 F5H768 121 aa11.23□□□□□ -0.61
RET-201ENST00000340058 H3BUA1 57 aa11.23□□□□□ -0.61
RET-201ENST00000340058 ADAMTSL5Q6ZMM2 481 aa11.23□□□□□ -0.61
RET-201ENST00000340058 HLA-DRB4P13762 266 aa11.23□□□□□ -0.61
RET-201ENST00000340058 RPL39P62891 51 aaKnown RBP11.23□□□□□ -0.61
RET-201ENST00000340058 COX11Q9Y6N1 276 aa11.23□□□□□ -0.61
RET-201ENST00000340058 HLA-DRB4X5D2U9 266 aa11.23□□□□□ -0.61
RET-201ENST00000340058 AVPP01185 164 aa11.22□□□□□ -0.61
RET-201ENST00000340058 PMVKQ15126 192 aa11.22□□□□□ -0.61
RET-201ENST00000340058 MRPL53Q96EL3 112 aaKnown RBP11.22□□□□□ -0.61
RET-201ENST00000340058 ERG28Q9UKR5 140 aa11.22□□□□□ -0.61
RET-201ENST00000340058 F8VRH5 84 aa11.22□□□□□ -0.61
RET-201ENST00000340058 PAX2Q02962 417 aa11.22□□□□□ -0.61
RET-201ENST00000340058 KLF5Q13887 457 aaPredicted RBP11.22□□□□□ -0.61
RET-201ENST00000340058 LGALS9BQ3B8N2 356 aa11.22□□□□□ -0.61
RET-201ENST00000340058 LGALS9CQ6DKI2 356 aa11.22□□□□□ -0.61
RET-201ENST00000340058 CITED2Q99967 270 aaPredicted RBP11.22□□□□□ -0.61
RET-201ENST00000340058 I3L3M4 83 aa11.22□□□□□ -0.61
RET-201ENST00000340058 COX8AP10176 69 aa11.22□□□□□ -0.61
RET-201ENST00000340058 FOXI2Q6ZQN5 318 aa11.21□□□□□ -0.61
RET-201ENST00000340058 MLST8Q9BVC4 326 aa11.21□□□□□ -0.61
RET-201ENST00000340058 ADAMTS20P59510 1910 aa11.21□□□□□ -0.61
RET-201ENST00000340058 PAX4O43316 350 aa11.21□□□□□ -0.61
RET-201ENST00000340058 CRIP1P50238 77 aa11.21□□□□□ -0.61
RET-201ENST00000340058 KRTAP10-9P60411 292 aa11.21□□□□□ -0.61
RET-201ENST00000340058 C6orf226Q5I0X4 101 aa11.21□□□□□ -0.61
RET-201ENST00000340058 A0A0J9YY99 117 aa11.21□□□□□ -0.62
RET-201ENST00000340058 UBE2V1Q13404 147 aa11.21□□□□□ -0.62
RET-201ENST00000340058 A8MWV9 139 aa11.2□□□□□ -0.62
RET-201ENST00000340058 AMTNQ6UX39 209 aa11.2□□□□□ -0.62
RET-201ENST00000340058 DEFB4AO15263 64 aa11.2□□□□□ -0.62
RET-201ENST00000340058 CD5LO43866 347 aa11.2□□□□□ -0.62
RET-201ENST00000340058 DLX4Q92988 240 aaPredicted RBP11.2□□□□□ -0.62
RET-201ENST00000340058 F8P00451 2351 aa11.2□□□□□ -0.62
RET-201ENST00000340058 TRAV8-2A0A0B4J237 113 aa11.2□□□□□ -0.62
RET-201ENST00000340058 PFN2P35080 140 aa11.2□□□□□ -0.62
RET-201ENST00000340058 SUMO4Q6EEV6 95 aa11.2□□□□□ -0.62
RET-201ENST00000340058 MAST4O15021 2626 aa11.19□□□□□ -0.62
RET-201ENST00000340058 RBAKDNA6NC62 111 aa11.19□□□□□ -0.62
RET-201ENST00000340058 LINC01559Q495D7 138 aa11.19□□□□□ -0.62
RET-201ENST00000340058 ZNF843Q8N446 348 aa11.19□□□□□ -0.62
RET-201ENST00000340058 MGAM2Q2M2H8 2515 aa11.19□□□□□ -0.62
RET-201ENST00000340058 TMEM238C9JI98 176 aa11.19□□□□□ -0.62
RET-201ENST00000340058 RHODO00212 210 aa11.19□□□□□ -0.62
RET-201ENST00000340058 BVES-AS1Q5T3Y7 98 aa11.19□□□□□ -0.62
RET-201ENST00000340058 PLEKHB2Q96CS7 222 aa11.19□□□□□ -0.62
RET-201ENST00000340058 TP53TG3Q9ULZ0 132 aa11.19□□□□□ -0.62
RET-201ENST00000340058 SMAD5-AS1Q9Y6J3 95 aa11.19□□□□□ -0.62
RET-201ENST00000340058 FRYLO94915 3013 aa11.19□□□□□ -0.62
RET-201ENST00000340058 TNFRSF13BO14836 293 aaPredicted RBP11.19□□□□□ -0.62
RET-201ENST00000340058 Q6ZQT7 251 aa11.19□□□□□ -0.62
RET-201ENST00000340058 LINC01549A6NIU2 74 aa11.18□□□□□ -0.62
RET-201ENST00000340058 KIR2DL5BA0A0G2JN68 375 aa11.18□□□□□ -0.62
RET-201ENST00000340058 KIR2DL5BA0A0G2JPC4 375 aa11.18□□□□□ -0.62
RET-201ENST00000340058 M0R2P5 195 aa11.18□□□□□ -0.62
RET-201ENST00000340058 KIR2DL5AQ8N109 375 aa11.18□□□□□ -0.62
RET-201ENST00000340058 C20orf173Q96LM9 149 aa11.18□□□□□ -0.62
RET-201ENST00000340058 YPEL4Q96NS1 127 aa11.18□□□□□ -0.62
RET-201ENST00000340058 LENEPQ9Y5L5 61 aa11.18□□□□□ -0.62
RET-201ENST00000340058 CMC4P56277 68 aaPredicted RBP11.18□□□□□ -0.62
RET-201ENST00000340058 MBD6Q96DN6 1003 aa11.18□□□□□ -0.62
RET-201ENST00000340058 CKS1BP61024 79 aa11.17□□□□□ -0.62
RET-201ENST00000340058 C9orf47Q6ZRZ4 202 aa11.17□□□□□ -0.62
RET-201ENST00000340058 PRM2P04554 102 aa11.17□□□□□ -0.62
RET-201ENST00000340058 OPRPNQ99935 248 aaPredicted RBP11.17□□□□□ -0.62
RET-201ENST00000340058 TSSC4Q9Y5U2 329 aaPredicted RBP11.17□□□□□ -0.62
RET-201ENST00000340058 A0A0J9YXV3 536 aa11.16□□□□□ -0.62
RET-201ENST00000340058 CRPP02741 224 aa11.16□□□□□ -0.62
RET-201ENST00000340058 SPINK8P0C7L1 97 aa11.16□□□□□ -0.62
RET-201ENST00000340058 GPHB5Q86YW7 130 aa11.16□□□□□ -0.62
RET-201ENST00000340058 DAD1P61803 113 aa11.16□□□□□ -0.62
RET-201ENST00000340058 ZFAND3Q9H8U3 227 aa11.16□□□□□ -0.62
RET-201ENST00000340058 CFAP46Q8IYW2 2715 aa11.16□□□□□ -0.62
RET-201ENST00000340058 A0A1B0GXF2 115 aa11.16□□□□□ -0.62
RET-201ENST00000340058 NXPH4O95158 308 aa11.16□□□□□ -0.62
RET-201ENST00000340058 IGHV4-31P0DP07 118 aa11.16□□□□□ -0.62
RET-201ENST00000340058 MORN3Q6PF18 240 aaPredicted RBP11.16□□□□□ -0.62
RET-201ENST00000340058 C20orf78Q9BR46 151 aa11.16□□□□□ -0.62
RET-201ENST00000340058 P0DMU3 169 aa11.15□□□□□ -0.62
RET-201ENST00000340058 FAM231AP0DMU4 169 aa11.15□□□□□ -0.62
RET-201ENST00000340058 FAM231CP0DMU5 169 aa11.15□□□□□ -0.62
RET-201ENST00000340058 EBI3Q14213 229 aa11.15□□□□□ -0.62
RET-201ENST00000340058 NBEAQ8NFP9 2946 aa11.15□□□□□ -0.62
RET-201ENST00000340058 BOD1L1Q8NFC6 3051 aa11.15□□□□□ -0.62
RET-201ENST00000340058 DNAJC9-AS1A6NH13 148 aa11.15□□□□□ -0.63
RET-201ENST00000340058 COPS9Q8WXC6 57 aa11.15□□□□□ -0.63
RET-201ENST00000340058 FRYQ5TBA9 3013 aa11.14□□□□□ -0.63
RET-201ENST00000340058 MYMXA0A1B0GTQ4 84 aa11.14□□□□□ -0.63
RET-201ENST00000340058 EDN2P20800 178 aa11.14□□□□□ -0.63
RET-201ENST00000340058 ETDBQ3ZM63 59 aa11.14□□□□□ -0.63
RET-201ENST00000340058 C18orf65Q6ZTR6 163 aa11.14□□□□□ -0.63
RET-201ENST00000340058 GATD1Q8NB37 220 aa11.14□□□□□ -0.63
RET-201ENST00000340058 RASL10AQ92737 203 aa11.14□□□□□ -0.63
RET-201ENST00000340058 NDUFA12Q9UI09 145 aa11.14□□□□□ -0.63
RET-201ENST00000340058 CTRLP40313 264 aa11.14□□□□□ -0.63
RET-201ENST00000340058 SPAG8Q99932 426 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms