RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 IGHV3-30-5P0DP03 117 aa10.16□□□□□ -0.78
USP47-202ENST00000339865 C1orf195Q5TG92 126 aa10.16□□□□□ -0.78
USP47-202ENST00000339865 FXYD2P54710 66 aa10.16□□□□□ -0.78
USP47-202ENST00000339865 YPEL3P61236 119 aaPredicted RBP10.16□□□□□ -0.78
USP47-202ENST00000339865 LY6G6CO95867 125 aa10.15□□□□□ -0.78
USP47-202ENST00000339865 PINLYPA6NC86 204 aa10.15□□□□□ -0.78
USP47-202ENST00000339865 SPRY2O43597 315 aa10.15□□□□□ -0.78
USP47-202ENST00000339865 ZFP36P26651 326 aaKnown RBP10.15□□□□□ -0.78
USP47-202ENST00000339865 EIF4EBP2Q13542 120 aaPredicted RBP10.15□□□□□ -0.78
USP47-202ENST00000339865 FAM120AOSQ5T036 256 aa10.15□□□□□ -0.78
USP47-202ENST00000339865 NDUFA4L2Q9NRX3 87 aa10.15□□□□□ -0.78
USP47-202ENST00000339865 COL8A2P25067 703 aa10.15□□□□□ -0.79
USP47-202ENST00000339865 NPBQ8NG41 125 aa10.15□□□□□ -0.79
USP47-202ENST00000339865 UQCRQO14949 82 aa10.14□□□□□ -0.79
USP47-202ENST00000339865 RNF144BQ7Z419 303 aa10.14□□□□□ -0.79
USP47-202ENST00000339865 PLA2G1BP04054 148 aaKnown RBP10.14□□□□□ -0.79
USP47-202ENST00000339865 FAM231DQ6ZW35 169 aa10.14□□□□□ -0.79
USP47-202ENST00000339865 WFDC10BQ8IUB3 73 aa10.14□□□□□ -0.79
USP47-202ENST00000339865 Q8NFD4 153 aa10.14□□□□□ -0.79
USP47-202ENST00000339865 C11orf52Q96A22 123 aa10.14□□□□□ -0.79
USP47-202ENST00000339865 M0R2N4 97 aa10.13□□□□□ -0.79
USP47-202ENST00000339865 GYPEP15421 78 aa10.13□□□□□ -0.79
USP47-202ENST00000339865 GATA1P15976 413 aaPredicted RBP10.13□□□□□ -0.79
USP47-202ENST00000339865 DIRC1Q969H9 104 aa10.13□□□□□ -0.79
USP47-202ENST00000339865 IGLV3-9A0A075B6K5 115 aa10.13□□□□□ -0.79
USP47-202ENST00000339865 GGNQ86UU5 652 aa10.13□□□□□ -0.79
USP47-202ENST00000339865 PTH2Q96A98 100 aa10.13□□□□□ -0.79
USP47-202ENST00000339865 F8P00451 2351 aa10.13□□□□□ -0.79
USP47-202ENST00000339865 LTBP4Q8N2S1 1624 aa10.12□□□□□ -0.79
USP47-202ENST00000339865 A0A0G2JNJ9 132 aa10.12□□□□□ -0.79
USP47-202ENST00000339865 C5orf63A6NC05 138 aa10.12□□□□□ -0.79
USP47-202ENST00000339865 Q9UFV3 132 aa10.12□□□□□ -0.79
USP47-202ENST00000339865 HOXB4P17483 251 aaPredicted RBP10.12□□□□□ -0.79
USP47-202ENST00000339865 FXYD5Q96DB9 178 aa10.12□□□□□ -0.79
USP47-202ENST00000339865 NDUFA4O00483 81 aa10.12□□□□□ -0.79
USP47-202ENST00000339865 PRR20EP86478 221 aa10.12□□□□□ -0.79
USP47-202ENST00000339865 PRR20CP86479 221 aa10.12□□□□□ -0.79
USP47-202ENST00000339865 PRR20DP86480 221 aa10.12□□□□□ -0.79
USP47-202ENST00000339865 PRR20BP86481 221 aa10.12□□□□□ -0.79
USP47-202ENST00000339865 PRR20AP86496 221 aa10.12□□□□□ -0.79
USP47-202ENST00000339865 SPANXB1Q9NS25 103 aaPredicted RBP10.12□□□□□ -0.79
USP47-202ENST00000339865 EPOPA6NHQ4 379 aa10.12□□□□□ -0.79
USP47-202ENST00000339865 K7EN84 100 aa10.12□□□□□ -0.79
USP47-202ENST00000339865 HIST2H2BDQ6DRA6 164 aa10.12□□□□□ -0.79
USP47-202ENST00000339865 IGHV4-30-2A0A087WSY4 118 aa10.11□□□□□ -0.79
USP47-202ENST00000339865 TRBV6-6A0A0A6YYG2 114 aa10.11□□□□□ -0.79
USP47-202ENST00000339865 IGLC6P0CF74 106 aa10.11□□□□□ -0.79
USP47-202ENST00000339865 DAZ2Q13117 558 aaKnown RBP10.11□□□□□ -0.79
USP47-202ENST00000339865 DAZ4Q86SG3 579 aaKnown RBP10.11□□□□□ -0.79
USP47-202ENST00000339865 DAZ3Q9NR90 486 aaKnown RBP10.11□□□□□ -0.79
USP47-202ENST00000339865 KIR2DL5BA0A0G2JN68 375 aa10.11□□□□□ -0.79
USP47-202ENST00000339865 KIR2DL5BA0A0G2JPC4 375 aa10.11□□□□□ -0.79
USP47-202ENST00000339865 H3BRN7 92 aa10.11□□□□□ -0.79
USP47-202ENST00000339865 ZNF726P1Q15940 193 aa10.11□□□□□ -0.79
USP47-202ENST00000339865 KIR2DL5AQ8N109 375 aa10.11□□□□□ -0.79
USP47-202ENST00000339865 LINC00643Q86TS7 51 aa10.11□□□□□ -0.79
USP47-202ENST00000339865 PRR30Q53SZ7 412 aaPredicted RBP10.1□□□□□ -0.79
USP47-202ENST00000339865 ZNF491Q8N8L2 437 aa10.1□□□□□ -0.79
USP47-202ENST00000339865 SERP1Q9Y6X1 66 aa10.1□□□□□ -0.79
USP47-202ENST00000339865 SCXQ7RTU7 201 aa10.1□□□□□ -0.79
USP47-202ENST00000339865 MSMBP08118 114 aa10.1□□□□□ -0.79
USP47-202ENST00000339865 ACANP16112 2415 aa10.1□□□□□ -0.79
USP47-202ENST00000339865 TMEM14CQ9P0S9 112 aa10.1□□□□□ -0.79
USP47-202ENST00000339865 FGF23Q9GZV9 251 aaPredicted RBP10.09□□□□□ -0.79
USP47-202ENST00000339865 ELANEP08246 267 aa10.09□□□□□ -0.79
USP47-202ENST00000339865 QRFPP83859 136 aa10.09□□□□□ -0.79
USP47-202ENST00000339865 C10orf105Q8TEF2 133 aa10.09□□□□□ -0.79
USP47-202ENST00000339865 C20orf173Q96LM9 149 aa10.09□□□□□ -0.79
USP47-202ENST00000339865 SNURFQ9Y675 71 aa10.09□□□□□ -0.79
USP47-202ENST00000339865 UBE2D3P61077 147 aa10.09□□□□□ -0.79
USP47-202ENST00000339865 PIK3CD-AS1Q5SR53 167 aa10.09□□□□□ -0.79
USP47-202ENST00000339865 PIFOQ8TCI5 191 aa10.09□□□□□ -0.79
USP47-202ENST00000339865 PMAIP1Q13794 54 aa10.08□□□□□ -0.8
USP47-202ENST00000339865 NRXN2Q9P2S2 1712 aa10.08□□□□□ -0.8
USP47-202ENST00000339865 LINC00173Q6ZV60 143 aa10.08□□□□□ -0.8
USP47-202ENST00000339865 TEX49A0A1B0GTD5 131 aa10.08□□□□□ -0.8
USP47-202ENST00000339865 TIMM17BO60830 172 aa10.08□□□□□ -0.8
USP47-202ENST00000339865 RPL39P62891 51 aaKnown RBP10.08□□□□□ -0.8
USP47-202ENST00000339865 C10orf91Q5T1B1 145 aa10.08□□□□□ -0.8
USP47-202ENST00000339865 GLI3P10071 1580 aa10.08□□□□□ -0.8
USP47-202ENST00000339865 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.08□□□□□ -0.8
USP47-202ENST00000339865 MT-ATP8P03928 68 aa10.07□□□□□ -0.8
USP47-202ENST00000339865 C9orf66Q5T8R8 295 aa10.07□□□□□ -0.8
USP47-202ENST00000339865 ENHOQ6UWT2 76 aa10.07□□□□□ -0.8
USP47-202ENST00000339865 IGLV3-32A0A0A0MS00 114 aa10.07□□□□□ -0.8
USP47-202ENST00000339865 ADAMTS7Q9UKP4 1686 aa10.07□□□□□ -0.8
USP47-202ENST00000339865 H3BT86 120 aa10.07□□□□□ -0.8
USP47-202ENST00000339865 ODF1Q14990 250 aa10.07□□□□□ -0.8
USP47-202ENST00000339865 MIR7-3HGQ8N6C7 128 aa10.07□□□□□ -0.8
USP47-202ENST00000339865 IGHV7-4-1A0A0J9YVY3 117 aa10.07□□□□□ -0.8
USP47-202ENST00000339865 HIVEP3Q5T1R4 2406 aa10.07□□□□□ -0.8
USP47-202ENST00000339865 NDUFA1O15239 70 aa10.07□□□□□ -0.8
USP47-202ENST00000339865 DEFB4AO15263 64 aa10.07□□□□□ -0.8
USP47-202ENST00000339865 IGHV4-30-4P0DP06 118 aa10.07□□□□□ -0.8
USP47-202ENST00000339865 IGHV4-31P0DP07 118 aa10.07□□□□□ -0.8
USP47-202ENST00000339865 IL15RAQ13261 267 aa10.07□□□□□ -0.8
USP47-202ENST00000339865 A0A096LNI7 61 aa10.06□□□□□ -0.8
USP47-202ENST00000339865 A0A0J9YXV3 536 aa10.06□□□□□ -0.8
USP47-202ENST00000339865 TPSG1Q9NRR2 321 aa10.06□□□□□ -0.8
USP47-202ENST00000339865 PDE6GP18545 87 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms