RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 SPANXN1Q5VSR9 72 aa14.2□□□□□ -0.14
PSPC1-201ENST00000338910 KLK15Q9H2R5 256 aa14.2□□□□□ -0.14
PSPC1-201ENST00000338910 CCDC168Q8NDH2 2452 aa14.19□□□□□ -0.14
PSPC1-201ENST00000338910 FAM223BA6NKX1 122 aa14.19□□□□□ -0.14
PSPC1-201ENST00000338910 TSPAN13O95857 204 aa14.19□□□□□ -0.14
PSPC1-201ENST00000338910 ORMDL2Q53FV1 153 aa14.19□□□□□ -0.14
PSPC1-201ENST00000338910 Q6ZUT4 128 aa14.19□□□□□ -0.14
PSPC1-201ENST00000338910 FAM223AQ8IWN6 122 aa14.19□□□□□ -0.14
PSPC1-201ENST00000338910 METTL26Q96S19 204 aa14.19□□□□□ -0.14
PSPC1-201ENST00000338910 SLC50A1Q9BRV3 221 aa14.19□□□□□ -0.14
PSPC1-201ENST00000338910 TRBV12-3P01733 135 aa14.19□□□□□ -0.14
PSPC1-201ENST00000338910 UBE2D3P61077 147 aa14.19□□□□□ -0.14
PSPC1-201ENST00000338910 UBE2D2P62837 147 aa14.19□□□□□ -0.14
PSPC1-201ENST00000338910 BEX4Q9NWD9 120 aaPredicted RBP14.19□□□□□ -0.14
PSPC1-201ENST00000338910 XGP55808 180 aa14.18□□□□□ -0.14
PSPC1-201ENST00000338910 HIST2H2BCQ6DN03 193 aa14.18□□□□□ -0.14
PSPC1-201ENST00000338910 Q6ZQT7 251 aa14.18□□□□□ -0.14
PSPC1-201ENST00000338910 IGHV3-11P01762 117 aa14.17□□□□□ -0.14
PSPC1-201ENST00000338910 ARL3P36405 182 aa14.17□□□□□ -0.14
PSPC1-201ENST00000338910 PSMB2P49721 201 aa14.17□□□□□ -0.14
PSPC1-201ENST00000338910 ZFP2Q6ZN57 461 aa14.17□□□□□ -0.14
PSPC1-201ENST00000338910 GLMPQ8WWB7 406 aa14.17□□□□□ -0.14
PSPC1-201ENST00000338910 TLN2Q9Y4G6 2542 aa14.17□□□□□ -0.14
PSPC1-201ENST00000338910 ZNF815PA8K554 130 aa14.17□□□□□ -0.14
PSPC1-201ENST00000338910 PF4V1P10720 104 aa14.17□□□□□ -0.14
PSPC1-201ENST00000338910 CR1P17927 2039 aa14.17□□□□□ -0.14
PSPC1-201ENST00000338910 LOC107984156A0A0G2JMH3 177 aa14.16□□□□□ -0.14
PSPC1-201ENST00000338910 CD7P09564 240 aa14.16□□□□□ -0.14
PSPC1-201ENST00000338910 ARL17AQ8IVW1 177 aa14.16□□□□□ -0.14
PSPC1-201ENST00000338910 BAALCQ8WXS3 180 aa14.16□□□□□ -0.14
PSPC1-201ENST00000338910 PLEKHB2Q96CS7 222 aa14.16□□□□□ -0.14
PSPC1-201ENST00000338910 CARD19Q96LW7 228 aa14.16□□□□□ -0.14
PSPC1-201ENST00000338910 SUMO2P61956 95 aaKnown RBP14.16□□□□□ -0.14
PSPC1-201ENST00000338910 DEFB112Q30KQ8 113 aa14.16□□□□□ -0.14
PSPC1-201ENST00000338910 PPDPFLQ8WWR9 84 aa14.16□□□□□ -0.14
PSPC1-201ENST00000338910 PTH2Q96A98 100 aa14.16□□□□□ -0.14
PSPC1-201ENST00000338910 TRAV8-2A0A0B4J237 113 aa14.15□□□□□ -0.14
PSPC1-201ENST00000338910 SFTA2Q6UW10 78 aa14.15□□□□□ -0.14
PSPC1-201ENST00000338910 RASL10AQ92737 203 aa14.15□□□□□ -0.14
PSPC1-201ENST00000338910 ITPR3Q14573 2671 aa14.15□□□□□ -0.14
PSPC1-201ENST00000338910 H3BVH4 76 aa14.15□□□□□ -0.14
PSPC1-201ENST00000338910 IGHV4-59P01825 116 aa14.15□□□□□ -0.14
PSPC1-201ENST00000338910 IGHV4-31P0DP07 118 aa14.15□□□□□ -0.14
PSPC1-201ENST00000338910 SCGB1D4Q6XE38 83 aa14.15□□□□□ -0.14
PSPC1-201ENST00000338910 TEN1Q86WV5 123 aa14.15□□□□□ -0.14
PSPC1-201ENST00000338910 PRRC2AP48634 2157 aaKnown RBP14.14□□□□□ -0.15
PSPC1-201ENST00000338910 PLA2G2AP14555 144 aa14.14□□□□□ -0.15
PSPC1-201ENST00000338910 SRSF9Q13242 221 aaKnown RBP eCLIP14.14□□□□□ -0.15
PSPC1-201ENST00000338910 UNQ9165/PRO28630Q6UXU0 137 aa14.14□□□□□ -0.15
PSPC1-201ENST00000338910 LRRC75A-AS1Q8N1F1 130 aa14.14□□□□□ -0.15
PSPC1-201ENST00000338910 PRSS29PA6NIE9 313 aa14.14□□□□□ -0.15
PSPC1-201ENST00000338910 J3QLI3 93 aa14.14□□□□□ -0.15
PSPC1-201ENST00000338910 Q96MF0 132 aa14.14□□□□□ -0.15
PSPC1-201ENST00000338910 C2orf66Q6UXQ4 117 aa14.13□□□□□ -0.15
PSPC1-201ENST00000338910 C9orf47Q6ZRZ4 202 aa14.13□□□□□ -0.15
PSPC1-201ENST00000338910 U3KQE9 123 aa14.13□□□□□ -0.15
PSPC1-201ENST00000338910 MRPL53Q96EL3 112 aaKnown RBP14.13□□□□□ -0.15
PSPC1-201ENST00000338910 ITPR2Q14571 2701 aa14.12□□□□□ -0.15
PSPC1-201ENST00000338910 LYRM7Q5U5X0 104 aa14.12□□□□□ -0.15
PSPC1-201ENST00000338910 SBSPONQ8IVN8 264 aa14.12□□□□□ -0.15
PSPC1-201ENST00000338910 USMG5Q96IX5 58 aa14.12□□□□□ -0.15
PSPC1-201ENST00000338910 J3QKU1 62 aa14.12□□□□□ -0.15
PSPC1-201ENST00000338910 NDUFA11Q86Y39 141 aa14.12□□□□□ -0.15
PSPC1-201ENST00000338910 RPL39LQ96EH5 51 aaKnown RBP14.12□□□□□ -0.15
PSPC1-201ENST00000338910 KLHL30-AS1Q8NEE0 82 aa14.11□□□□□ -0.15
PSPC1-201ENST00000338910 TCL1BO95988 128 aa14.11□□□□□ -0.15
PSPC1-201ENST00000338910 PRR9Q5T870 116 aa14.11□□□□□ -0.15
PSPC1-201ENST00000338910 KRTAP1-3Q8IUG1 177 aa14.11□□□□□ -0.15
PSPC1-201ENST00000338910 VCX2Q9H322 139 aa14.11□□□□□ -0.15
PSPC1-201ENST00000338910 ERG28Q9UKR5 140 aa14.11□□□□□ -0.15
PSPC1-201ENST00000338910 H3BUA1 57 aa14.1□□□□□ -0.15
PSPC1-201ENST00000338910 IGLV1-40P01703 118 aa14.1□□□□□ -0.15
PSPC1-201ENST00000338910 A0A0J9YY99 117 aa14.09□□□□□ -0.15
PSPC1-201ENST00000338910 RNF183Q96D59 192 aa14.09□□□□□ -0.15
PSPC1-201ENST00000338910 FLNAP21333 2647 aaKnown RBP14.09□□□□□ -0.15
PSPC1-201ENST00000338910 TRBV20-1A0A075B6N2 111 aa14.09□□□□□ -0.15
PSPC1-201ENST00000338910 NDUFA4O00483 81 aa14.09□□□□□ -0.15
PSPC1-201ENST00000338910 CRYGDP07320 174 aa14.09□□□□□ -0.15
PSPC1-201ENST00000338910 M0R381 172 aa14.08□□□□□ -0.16
PSPC1-201ENST00000338910 BRI3O95415 125 aa14.08□□□□□ -0.16
PSPC1-201ENST00000338910 DPH3P1Q9H4G8 78 aa14.08□□□□□ -0.16
PSPC1-201ENST00000338910 GCN1Q92616 2671 aaKnown RBP14.08□□□□□ -0.16
PSPC1-201ENST00000338910 C16orf92Q96LL3 132 aa14.07□□□□□ -0.16
PSPC1-201ENST00000338910 A8MWV9 139 aa14.07□□□□□ -0.16
PSPC1-201ENST00000338910 SPRY2O43597 315 aa14.07□□□□□ -0.16
PSPC1-201ENST00000338910 ZNF688P0C7X2 276 aa14.07□□□□□ -0.16
PSPC1-201ENST00000338910 SONP18583 2426 aaKnown RBP14.07□□□□□ -0.16
PSPC1-201ENST00000338910 C11orf86A6NJI1 115 aa14.06□□□□□ -0.16
PSPC1-201ENST00000338910 CFHR3Q02985 330 aa14.06□□□□□ -0.16
PSPC1-201ENST00000338910 C10orf99Q6UWK7 81 aa14.06□□□□□ -0.16
PSPC1-201ENST00000338910 C14orf178Q8N769 122 aaPredicted RBP14.06□□□□□ -0.16
PSPC1-201ENST00000338910 IGLV4-69A0A075B6H9 119 aa14.06□□□□□ -0.16
PSPC1-201ENST00000338910 FSHBP01225 129 aa14.06□□□□□ -0.16
PSPC1-201ENST00000338910 CFC1BP0CG36 223 aa14.06□□□□□ -0.16
PSPC1-201ENST00000338910 CFC1P0CG37 223 aa14.06□□□□□ -0.16
PSPC1-201ENST00000338910 UNC79Q9P2D8 2635 aa14.06□□□□□ -0.16
PSPC1-201ENST00000338910 PDZD2O15018 2839 aa14.06□□□□□ -0.16
PSPC1-201ENST00000338910 RPL11P62913 178 aaKnown RBP14.05□□□□□ -0.16
PSPC1-201ENST00000338910 WFDC11Q8NEX6 87 aa14.05□□□□□ -0.16
PSPC1-201ENST00000338910 DUSP14O95147 198 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 154.4 ms