RNA–Protein interactions for RNA: ENST00000338748.9

SCNN1A-202, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 2,203 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-202ENST00000338748 ZNF256Q9Y2P7 627 aaPredicted RBP11.98□□□□□ -0.49
SCNN1A-202ENST00000338748 PRM2P04554 102 aa11.98□□□□□ -0.49
SCNN1A-202ENST00000338748 TSPOP30536 169 aa11.98□□□□□ -0.49
SCNN1A-202ENST00000338748 HILS1P60008 231 aa11.98□□□□□ -0.49
SCNN1A-202ENST00000338748 SMIM2Q9BVW6 85 aa11.98□□□□□ -0.49
SCNN1A-202ENST00000338748 C16orf95Q9H693 158 aa11.97□□□□□ -0.49
SCNN1A-202ENST00000338748 TRAV2A0A0B4J234 112 aa11.96□□□□□ -0.49
SCNN1A-202ENST00000338748 A8MTW9 85 aa11.96□□□□□ -0.49
SCNN1A-202ENST00000338748 G0S2P27469 103 aa11.96□□□□□ -0.49
SCNN1A-202ENST00000338748 SUMO2P61956 95 aaKnown RBP11.96□□□□□ -0.49
SCNN1A-202ENST00000338748 ST20Q9HBF5 79 aa11.96□□□□□ -0.49
SCNN1A-202ENST00000338748 HIVEP1P15822 2718 aa11.96□□□□□ -0.5
SCNN1A-202ENST00000338748 HNRNPA3P51991 378 aaKnown RBP11.95□□□□□ -0.5
SCNN1A-202ENST00000338748 LAGE3Q14657 143 aa11.95□□□□□ -0.5
SCNN1A-202ENST00000338748 LGALS9BQ3B8N2 356 aa11.95□□□□□ -0.5
SCNN1A-202ENST00000338748 LGALS9CQ6DKI2 356 aa11.95□□□□□ -0.5
SCNN1A-202ENST00000338748 POM121L12Q8N7R1 296 aa11.95□□□□□ -0.5
SCNN1A-202ENST00000338748 DKK2Q9UBU2 259 aa11.95□□□□□ -0.5
SCNN1A-202ENST00000338748 GOLT1BQ9Y3E0 138 aa11.95□□□□□ -0.5
SCNN1A-202ENST00000338748 LY6G6DO95868 133 aa11.95□□□□□ -0.5
SCNN1A-202ENST00000338748 HTN1P15515 57 aa11.95□□□□□ -0.5
SCNN1A-202ENST00000338748 ODF3L2Q3SX64 289 aa11.95□□□□□ -0.5
SCNN1A-202ENST00000338748 ZNF418Q8TF45 676 aaPredicted RBP11.95□□□□□ -0.5
SCNN1A-202ENST00000338748 TSSC4Q9Y5U2 329 aaPredicted RBP11.95□□□□□ -0.5
SCNN1A-202ENST00000338748 FN1P02751 2386 aaKnown RBP11.94□□□□□ -0.5
SCNN1A-202ENST00000338748 SMIM17P0DL12 118 aa11.94□□□□□ -0.5
SCNN1A-202ENST00000338748 TCTAP57738 103 aa11.94□□□□□ -0.5
SCNN1A-202ENST00000338748 NEGR1Q7Z3B1 354 aa11.94□□□□□ -0.5
SCNN1A-202ENST00000338748 C2CD3Q4AC94 2353 aa11.94□□□□□ -0.5
SCNN1A-202ENST00000338748 FAM74A4Q5TZK3 123 aa11.94□□□□□ -0.5
SCNN1A-202ENST00000338748 SUMO4Q6EEV6 95 aa11.94□□□□□ -0.5
SCNN1A-202ENST00000338748 DEFB104AQ8WTQ1 72 aa11.93□□□□□ -0.5
SCNN1A-202ENST00000338748 SPAG8Q99932 426 aaPredicted RBP11.93□□□□□ -0.5
SCNN1A-202ENST00000338748 VWFP04275 2813 aa11.93□□□□□ -0.5
SCNN1A-202ENST00000338748 NOTCH3Q9UM47 2321 aa11.93□□□□□ -0.5
SCNN1A-202ENST00000338748 CBY3A6NI87 242 aa11.92□□□□□ -0.5
SCNN1A-202ENST00000338748 ADARB2-AS1A8MUL3 147 aa11.92□□□□□ -0.5
SCNN1A-202ENST00000338748 HSBP1L1C9JCN9 74 aa11.92□□□□□ -0.5
SCNN1A-202ENST00000338748 ZNF25P17030 456 aaPredicted RBP11.92□□□□□ -0.5
SCNN1A-202ENST00000338748 ANKRD39Q53RE8 183 aa11.92□□□□□ -0.5
SCNN1A-202ENST00000338748 STPG4Q8N801 248 aa11.92□□□□□ -0.5
SCNN1A-202ENST00000338748 C20orf78Q9BR46 151 aa11.92□□□□□ -0.5
SCNN1A-202ENST00000338748 TMEM160Q9NX00 188 aa11.92□□□□□ -0.5
SCNN1A-202ENST00000338748 ODF1Q14990 250 aa11.91□□□□□ -0.5
SCNN1A-202ENST00000338748 NUDT3O95989 172 aa11.91□□□□□ -0.5
SCNN1A-202ENST00000338748 CRYGDP07320 174 aa11.91□□□□□ -0.5
SCNN1A-202ENST00000338748 PROK1P58294 105 aa11.91□□□□□ -0.5
SCNN1A-202ENST00000338748 SCGB2A2Q13296 93 aa11.91□□□□□ -0.5
SCNN1A-202ENST00000338748 ZNF876PQ49A33 203 aa11.91□□□□□ -0.5
SCNN1A-202ENST00000338748 CSTL1Q9H114 145 aa11.91□□□□□ -0.5
SCNN1A-202ENST00000338748 F5H697 171 aa11.9□□□□□ -0.51
SCNN1A-202ENST00000338748 COL5A1-AS1Q5SY13 56 aa11.9□□□□□ -0.51
SCNN1A-202ENST00000338748 TENM1Q9UKZ4 2725 aa11.89□□□□□ -0.51
SCNN1A-202ENST00000338748 PRSS1P07477 247 aa11.89□□□□□ -0.51
SCNN1A-202ENST00000338748 NSUN5P1Q3KNT7 163 aa11.89□□□□□ -0.51
SCNN1A-202ENST00000338748 TRGV11A0A075B6L2 103 aa11.88□□□□□ -0.51
SCNN1A-202ENST00000338748 HINT1P49773 126 aaPredicted RBP11.88□□□□□ -0.51
SCNN1A-202ENST00000338748 KRTAP10-3P60369 221 aa11.88□□□□□ -0.51
SCNN1A-202ENST00000338748 MORN3Q6PF18 240 aaPredicted RBP11.88□□□□□ -0.51
SCNN1A-202ENST00000338748 SYT8Q8NBV8 401 aa11.88□□□□□ -0.51
SCNN1A-202ENST00000338748 MRPS16Q9Y3D3 137 aaKnown RBP11.88□□□□□ -0.51
SCNN1A-202ENST00000338748 SLC25A34Q6PIV7 304 aa11.88□□□□□ -0.51
SCNN1A-202ENST00000338748 INAFM1C9JVW0 142 aa11.87□□□□□ -0.51
SCNN1A-202ENST00000338748 NDUFA7O95182 113 aa11.87□□□□□ -0.51
SCNN1A-202ENST00000338748 ZNF56Q15929 161 aa11.87□□□□□ -0.51
SCNN1A-202ENST00000338748 TMEM208Q9BTX3 173 aa11.87□□□□□ -0.51
SCNN1A-202ENST00000338748 NACAE9PAV3 2078 aa11.87□□□□□ -0.51
SCNN1A-202ENST00000338748 TRAV25A0A0B4J276 109 aa11.87□□□□□ -0.51
SCNN1A-202ENST00000338748 SAP30O75446 220 aa11.87□□□□□ -0.51
SCNN1A-202ENST00000338748 ORMDL2Q53FV1 153 aa11.87□□□□□ -0.51
SCNN1A-202ENST00000338748 M0QY20 66 aa11.86□□□□□ -0.51
SCNN1A-202ENST00000338748 COX8AP10176 69 aa11.86□□□□□ -0.51
SCNN1A-202ENST00000338748 POLR2KP53803 58 aaKnown RBP11.86□□□□□ -0.51
SCNN1A-202ENST00000338748 TOMM6Q96B49 74 aa11.86□□□□□ -0.51
SCNN1A-202ENST00000338748 ZMAT4Q9H898 229 aa11.86□□□□□ -0.51
SCNN1A-202ENST00000338748 XCL2Q9UBD3 114 aa11.86□□□□□ -0.51
SCNN1A-202ENST00000338748 ATP5LO75964 103 aa11.86□□□□□ -0.51
SCNN1A-202ENST00000338748 FGF6P10767 208 aa11.86□□□□□ -0.51
SCNN1A-202ENST00000338748 WFDC10AQ9H1F0 79 aa11.86□□□□□ -0.51
SCNN1A-202ENST00000338748 TRRAPQ9Y4A5 3859 aa11.85□□□□□ -0.51
SCNN1A-202ENST00000338748 SDHAF1A6NFY7 115 aa11.85□□□□□ -0.51
SCNN1A-202ENST00000338748 C2orf66Q6UXQ4 117 aa11.85□□□□□ -0.51
SCNN1A-202ENST00000338748 MRPL35Q9NZE8 188 aaKnown RBP11.85□□□□□ -0.51
SCNN1A-202ENST00000338748 HHLA3Q9XRX5 114 aa11.85□□□□□ -0.51
SCNN1A-202ENST00000338748 IGHV3-73A0A0B4J1V6 119 aa11.84□□□□□ -0.51
SCNN1A-202ENST00000338748 PPP1R17O96001 155 aa11.84□□□□□ -0.51
SCNN1A-202ENST00000338748 OR11H12B2RN74 326 aa11.84□□□□□ -0.51
SCNN1A-202ENST00000338748 C2orf91Q6ZV80 131 aa11.84□□□□□ -0.51
SCNN1A-202ENST00000338748 C11orf72Q8NBR9 251 aa11.84□□□□□ -0.51
SCNN1A-202ENST00000338748 LINC01587Q99440 93 aa11.84□□□□□ -0.51
SCNN1A-202ENST00000338748 DLEU1O43261 78 aa11.83□□□□□ -0.52
SCNN1A-202ENST00000338748 INSP01308 110 aa11.83□□□□□ -0.52
SCNN1A-202ENST00000338748 TRPT1Q86TN4 253 aaKnown RBP11.83□□□□□ -0.52
SCNN1A-202ENST00000338748 STHQ8IWL8 128 aa11.83□□□□□ -0.52
SCNN1A-202ENST00000338748 IGKV2D-26A0A0A0MRZ7 120 aa11.83□□□□□ -0.52
SCNN1A-202ENST00000338748 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.83□□□□□ -0.52
SCNN1A-202ENST00000338748 K7EMI3 77 aa11.83□□□□□ -0.52
SCNN1A-202ENST00000338748 MPV17L2Q567V2 206 aa11.83□□□□□ -0.52
SCNN1A-202ENST00000338748 PCP2Q8IVA1 136 aa11.83□□□□□ -0.52
SCNN1A-202ENST00000338748 SCGB3A1Q96QR1 104 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms