RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 DNLZQ5SXM8 178 aa8.87□□□□□ -0.99
NUDCD3-201ENST00000338427 FAM162BQ5T6X4 162 aa8.87□□□□□ -0.99
NUDCD3-201ENST00000338427 Q5VSD8 79 aa8.87□□□□□ -0.99
NUDCD3-201ENST00000338427 COX8CQ7Z4L0 72 aa8.87□□□□□ -0.99
NUDCD3-201ENST00000338427 SFT2D1Q8WV19 159 aa8.87□□□□□ -0.99
NUDCD3-201ENST00000338427 NKX6-2Q9C056 277 aaPredicted RBP8.87□□□□□ -0.99
NUDCD3-201ENST00000338427 LTAP01374 205 aa8.86□□□□□ -0.99
NUDCD3-201ENST00000338427 SSTP61278 116 aa8.86□□□□□ -0.99
NUDCD3-201ENST00000338427 UBE2G1P62253 170 aa8.86□□□□□ -0.99
NUDCD3-201ENST00000338427 KCNRGQ8N5I3 272 aa8.86□□□□□ -0.99
NUDCD3-201ENST00000338427 FAM213BQ8TBF2 198 aa8.86□□□□□ -0.99
NUDCD3-201ENST00000338427 BAALCQ8WXS3 180 aa8.86□□□□□ -0.99
NUDCD3-201ENST00000338427 SFRP2Q96HF1 295 aa8.86□□□□□ -0.99
NUDCD3-201ENST00000338427 FMC1Q96HJ9 113 aa8.86□□□□□ -0.99
NUDCD3-201ENST00000338427 PHLDA3Q9Y5J5 127 aa8.86□□□□□ -0.99
NUDCD3-201ENST00000338427 TRBV6-1A0A0K0K1D8 114 aa8.85□□□□□ -0.99
NUDCD3-201ENST00000338427 AKR1C3P42330 323 aa8.85□□□□□ -0.99
NUDCD3-201ENST00000338427 CCL20P78556 96 aa8.85□□□□□ -0.99
NUDCD3-201ENST00000338427 LINC01620Q4KN68 170 aa8.85□□□□□ -0.99
NUDCD3-201ENST00000338427 PIK3CD-AS1Q5SR53 167 aa8.85□□□□□ -0.99
NUDCD3-201ENST00000338427 SYT8Q8NBV8 401 aa8.85□□□□□ -0.99
NUDCD3-201ENST00000338427 STOML3Q8TAV4 291 aa8.85□□□□□ -0.99
NUDCD3-201ENST00000338427 MBD3L1Q8WWY6 194 aa8.85□□□□□ -0.99
NUDCD3-201ENST00000338427 SCO2A0A1W2PP80 73 aa8.84□□□□□ -0.99
NUDCD3-201ENST00000338427 TPT1P13693 172 aaKnown RBP8.84□□□□□ -0.99
NUDCD3-201ENST00000338427 LINC01559Q495D7 138 aa8.84□□□□□ -0.99
NUDCD3-201ENST00000338427 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.83□□□□□ -1
NUDCD3-201ENST00000338427 FRZBQ92765 325 aa8.83□□□□□ -1
NUDCD3-201ENST00000338427 ZNF471Q9BX82 626 aaPredicted RBP8.83□□□□□ -1
NUDCD3-201ENST00000338427 KLK12Q9UKR0 248 aa8.83□□□□□ -1
NUDCD3-201ENST00000338427 MYCBP2O75592 4640 aa8.83□□□□□ -1
NUDCD3-201ENST00000338427 SEC11BP0C7V7 166 aa8.82□□□□□ -1
NUDCD3-201ENST00000338427 NIT1Q86X76 327 aa8.82□□□□□ -1
NUDCD3-201ENST00000338427 BAGE2Q86Y30 109 aa8.82□□□□□ -1
NUDCD3-201ENST00000338427 OR10AG1Q8NH19 301 aa8.82□□□□□ -1
NUDCD3-201ENST00000338427 TM2D2Q9BX73 214 aa8.82□□□□□ -1
NUDCD3-201ENST00000338427 SRRM2Q9UQ35 2752 aaKnown RBP8.82□□□□□ -1
NUDCD3-201ENST00000338427 RHODO00212 210 aa8.81□□□□□ -1
NUDCD3-201ENST00000338427 LAGE3Q14657 143 aa8.81□□□□□ -1
NUDCD3-201ENST00000338427 TMUB2Q71RG4 321 aa8.81□□□□□ -1
NUDCD3-201ENST00000338427 ZFP82Q8N141 532 aa8.81□□□□□ -1
NUDCD3-201ENST00000338427 NTN5Q8WTR8 489 aaPredicted RBP8.81□□□□□ -1
NUDCD3-201ENST00000338427 MLST8Q9BVC4 326 aa8.81□□□□□ -1
NUDCD3-201ENST00000338427 FLG2Q5D862 2391 aaPredicted RBP8.8□□□□□ -1
NUDCD3-201ENST00000338427 A0A087WWC5 75 aa8.8□□□□□ -1
NUDCD3-201ENST00000338427 TRAV8-3A0A0A6YYJ7 113 aa8.8□□□□□ -1
NUDCD3-201ENST00000338427 HMSDA8MTL9 139 aa8.8□□□□□ -1
NUDCD3-201ENST00000338427 H2AFB1P0C5Y9 115 aa8.8□□□□□ -1
NUDCD3-201ENST00000338427 UBE2D3P61077 147 aa8.8□□□□□ -1
NUDCD3-201ENST00000338427 UBE2D2P62837 147 aa8.8□□□□□ -1
NUDCD3-201ENST00000338427 PRR27Q6MZM9 219 aa8.8□□□□□ -1
NUDCD3-201ENST00000338427 UBE2WQ96B02 151 aa8.8□□□□□ -1
NUDCD3-201ENST00000338427 TMEM70Q9BUB7 260 aa8.8□□□□□ -1
NUDCD3-201ENST00000338427 IGKV2D-24A0A075B6R9 120 aa8.79□□□□□ -1
NUDCD3-201ENST00000338427 A0A0D9SG52 128 aa8.79□□□□□ -1
NUDCD3-201ENST00000338427 TMEM262E9PQX1 116 aa8.79□□□□□ -1
NUDCD3-201ENST00000338427 BCL2L11O43521 198 aa8.79□□□□□ -1
NUDCD3-201ENST00000338427 ZNF345Q14585 488 aa8.79□□□□□ -1
NUDCD3-201ENST00000338427 NEXN-AS1Q8NBZ9 246 aa8.79□□□□□ -1
NUDCD3-201ENST00000338427 DERL1Q9BUN8 251 aa8.79□□□□□ -1
NUDCD3-201ENST00000338427 BOLA1Q9Y3E2 137 aa8.79□□□□□ -1
NUDCD3-201ENST00000338427 KANTRA0A1W2PQU2 76 aa8.78□□□□□ -1
NUDCD3-201ENST00000338427 RBFOX3A6NFN3 312 aa8.78□□□□□ -1
NUDCD3-201ENST00000338427 FAM229AH3BQW9 127 aa8.78□□□□□ -1
NUDCD3-201ENST00000338427 GZMBP10144 247 aa8.78□□□□□ -1
NUDCD3-201ENST00000338427 RPL36AP83881 106 aaKnown RBP8.78□□□□□ -1
NUDCD3-201ENST00000338427 RPL36ALQ969Q0 106 aaKnown RBP8.78□□□□□ -1
NUDCD3-201ENST00000338427 SSBP4Q9BWG4 385 aaPredicted RBP8.78□□□□□ -1
NUDCD3-201ENST00000338427 TRBV7-3A0A075B6L6 115 aa8.77□□□□□ -1.01
NUDCD3-201ENST00000338427 RAB19A4D1S5 217 aa8.77□□□□□ -1.01
NUDCD3-201ENST00000338427 UMAD1C9J7I0 102 aa8.77□□□□□ -1.01
NUDCD3-201ENST00000338427 S100A9P06702 114 aaKnown RBP8.77□□□□□ -1.01
NUDCD3-201ENST00000338427 RAB4BP61018 213 aa8.77□□□□□ -1.01
NUDCD3-201ENST00000338427 ZNF56Q15929 161 aa8.77□□□□□ -1.01
NUDCD3-201ENST00000338427 ENHOQ6UWT2 76 aa8.77□□□□□ -1.01
NUDCD3-201ENST00000338427 TCEAL7Q9BRU2 100 aa8.77□□□□□ -1.01
NUDCD3-201ENST00000338427 GNG13Q9P2W3 67 aa8.77□□□□□ -1.01
NUDCD3-201ENST00000338427 URGCP-MRPS24S4R325 110 aa8.77□□□□□ -1.01
NUDCD3-201ENST00000338427 A0A087WX48 190 aa8.76□□□□□ -1.01
NUDCD3-201ENST00000338427 TRBV10-1A0A0K0K1A3 114 aa8.76□□□□□ -1.01
NUDCD3-201ENST00000338427 F5H697 171 aa8.76□□□□□ -1.01
NUDCD3-201ENST00000338427 SNAI2O43623 268 aa8.76□□□□□ -1.01
NUDCD3-201ENST00000338427 PFDN1O60925 122 aa8.76□□□□□ -1.01
NUDCD3-201ENST00000338427 RPL35P42766 123 aaKnown RBP8.76□□□□□ -1.01
NUDCD3-201ENST00000338427 TOR2AQ5JU69 321 aa8.76□□□□□ -1.01
NUDCD3-201ENST00000338427 NTM-AS1Q6ZSK4 140 aa8.76□□□□□ -1.01
NUDCD3-201ENST00000338427 KIF25-AS1Q9Y6Z4 181 aa8.76□□□□□ -1.01
NUDCD3-201ENST00000338427 TRBV6-8A0A0A6YYG3 113 aa8.75□□□□□ -1.01
NUDCD3-201ENST00000338427 IGLV2-8P01709 118 aa8.75□□□□□ -1.01
NUDCD3-201ENST00000338427 C1QBP02746 253 aa8.75□□□□□ -1.01
NUDCD3-201ENST00000338427 SPANXN1Q5VSR9 72 aa8.75□□□□□ -1.01
NUDCD3-201ENST00000338427 C15orf54Q8N8G6 183 aa8.75□□□□□ -1.01
NUDCD3-201ENST00000338427 OR10G8Q8NGN5 311 aa8.75□□□□□ -1.01
NUDCD3-201ENST00000338427 DEFB104AQ8WTQ1 72 aa8.75□□□□□ -1.01
NUDCD3-201ENST00000338427 OR5AL1P0C617 328 aa8.74□□□□□ -1.01
NUDCD3-201ENST00000338427 MPV17L2Q567V2 206 aa8.74□□□□□ -1.01
NUDCD3-201ENST00000338427 Q6ZSA8 131 aa8.74□□□□□ -1.01
NUDCD3-201ENST00000338427 Q8N976 141 aa8.74□□□□□ -1.01
NUDCD3-201ENST00000338427 CXCL1P09341 107 aa8.73□□□□□ -1.01
NUDCD3-201ENST00000338427 ATRAIDQ6UW56 229 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms