RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 ANKRD39Q53RE8 183 aa10.13□□□□□ -0.79
HLCS-201ENST00000336648 C20orf173Q96LM9 149 aa10.13□□□□□ -0.79
HLCS-201ENST00000336648 MYCNOSP40205 109 aa10.13□□□□□ -0.79
HLCS-201ENST00000336648 CTRLP40313 264 aa10.13□□□□□ -0.79
HLCS-201ENST00000336648 KIAA2026Q5HYC2 2103 aa10.13□□□□□ -0.79
HLCS-201ENST00000336648 GPHB5Q86YW7 130 aa10.13□□□□□ -0.79
HLCS-201ENST00000336648 MLST8Q9BVC4 326 aa10.12□□□□□ -0.79
HLCS-201ENST00000336648 BPY2O14599 106 aa10.12□□□□□ -0.79
HLCS-201ENST00000336648 GATA1P15976 413 aaPredicted RBP10.12□□□□□ -0.79
HLCS-201ENST00000336648 WISP1O95388 367 aa10.11□□□□□ -0.79
HLCS-201ENST00000336648 ASPHD1Q5U4P2 390 aa10.11□□□□□ -0.79
HLCS-201ENST00000336648 ARTNQ5T4W7 220 aa10.11□□□□□ -0.79
HLCS-201ENST00000336648 Q8N1Y9 231 aa10.11□□□□□ -0.79
HLCS-201ENST00000336648 PLXNA4Q9HCM2 1894 aa10.11□□□□□ -0.79
HLCS-201ENST00000336648 SLURP1P55000 103 aa10.11□□□□□ -0.79
HLCS-201ENST00000336648 ZNF524Q96C55 264 aa10.11□□□□□ -0.79
HLCS-201ENST00000336648 HIST2H2BDQ6DRA6 164 aa10.1□□□□□ -0.79
HLCS-201ENST00000336648 PATE2Q6UY27 113 aa10.1□□□□□ -0.79
HLCS-201ENST00000336648 FGF23Q9GZV9 251 aaPredicted RBP10.1□□□□□ -0.79
HLCS-201ENST00000336648 THSD7BQ9C0I4 1608 aa10.1□□□□□ -0.79
HLCS-201ENST00000336648 ATP5EP2Q5VTU8 51 aa10.1□□□□□ -0.79
HLCS-201ENST00000336648 APRG1Q8IVJ8 170 aa10.1□□□□□ -0.79
HLCS-201ENST00000336648 C5orf56Q8N8D9 126 aa10.1□□□□□ -0.79
HLCS-201ENST00000336648 IGHV4OR15-8A0A075B7B6 117 aa10.1□□□□□ -0.79
HLCS-201ENST00000336648 A0A087WW49 117 aa10.1□□□□□ -0.79
HLCS-201ENST00000336648 CNOT1A5YKK6 2376 aaKnown RBP10.1□□□□□ -0.79
HLCS-201ENST00000336648 TRBV10-1A0A0K0K1A3 114 aa10.1□□□□□ -0.79
HLCS-201ENST00000336648 PTPRDP23468 1912 aa10.1□□□□□ -0.79
HLCS-201ENST00000336648 Q8N9W7 124 aa10.09□□□□□ -0.79
HLCS-201ENST00000336648 IGHV4-61A0A0C4DH41 118 aa10.09□□□□□ -0.79
HLCS-201ENST00000336648 DAZAP2Q15038 168 aaPredicted RBP10.09□□□□□ -0.79
HLCS-201ENST00000336648 SEM1Q6ZVN7 128 aa10.09□□□□□ -0.79
HLCS-201ENST00000336648 C10orf105Q8TEF2 133 aa10.09□□□□□ -0.79
HLCS-201ENST00000336648 HHLA3Q9XRX5 114 aa10.09□□□□□ -0.79
HLCS-201ENST00000336648 INSL3P51460 131 aa10.09□□□□□ -0.79
HLCS-201ENST00000336648 LTBP1Q14766 1721 aa10.09□□□□□ -0.79
HLCS-201ENST00000336648 C2orf70A6NJV1 201 aa10.09□□□□□ -0.79
HLCS-201ENST00000336648 FAM167A-AS1Q96KT0 104 aa10.09□□□□□ -0.79
HLCS-201ENST00000336648 PHF3Q92576 2039 aaKnown RBP10.09□□□□□ -0.79
HLCS-201ENST00000336648 YLPM1P49750 1951 aaKnown RBP10.08□□□□□ -0.8
HLCS-201ENST00000336648 A6NED7 52 aa10.08□□□□□ -0.8
HLCS-201ENST00000336648 DAND5Q8N907 189 aa10.08□□□□□ -0.8
HLCS-201ENST00000336648 MED12Q93074 2177 aa10.08□□□□□ -0.8
HLCS-201ENST00000336648 ACACAQ13085 2346 aa10.08□□□□□ -0.8
HLCS-201ENST00000336648 IGHV1-58A0A0C4DH39 117 aa10.08□□□□□ -0.8
HLCS-201ENST00000336648 NDUFC1O43677 76 aa10.08□□□□□ -0.8
HLCS-201ENST00000336648 COX7BP24311 80 aa10.07□□□□□ -0.8
HLCS-201ENST00000336648 C4orf3Q8WVX3 66 aa10.07□□□□□ -0.8
HLCS-201ENST00000336648 LYRM9A8MSI8 78 aa10.07□□□□□ -0.8
HLCS-201ENST00000336648 DEFB136Q30KP8 78 aa10.07□□□□□ -0.8
HLCS-201ENST00000336648 IGHV3-30P01768 117 aa10.07□□□□□ -0.8
HLCS-201ENST00000336648 IGHV3-33P01772 117 aa10.07□□□□□ -0.8
HLCS-201ENST00000336648 IGLC6P0CF74 106 aa10.07□□□□□ -0.8
HLCS-201ENST00000336648 IGHV3-30-3P0DP02 117 aa10.07□□□□□ -0.8
HLCS-201ENST00000336648 IGHV3-30-5P0DP03 117 aa10.07□□□□□ -0.8
HLCS-201ENST00000336648 SPAG11BQ08648 103 aa10.07□□□□□ -0.8
HLCS-201ENST00000336648 KLK5Q9Y337 293 aaPredicted RBP10.07□□□□□ -0.8
HLCS-201ENST00000336648 C14orf177Q52M58 125 aa10.06□□□□□ -0.8
HLCS-201ENST00000336648 LINC00173Q6ZV60 143 aa10.06□□□□□ -0.8
HLCS-201ENST00000336648 IGKV2D-26A0A0A0MRZ7 120 aa10.06□□□□□ -0.8
HLCS-201ENST00000336648 IGHV4-38-2P0DP08 117 aa10.06□□□□□ -0.8
HLCS-201ENST00000336648 LYPD6Q86Y78 171 aa10.06□□□□□ -0.8
HLCS-201ENST00000336648 B9D2Q9BPU9 175 aa10.06□□□□□ -0.8
HLCS-201ENST00000336648 IGLV10-54A0A075B6I4 117 aa10.06□□□□□ -0.8
HLCS-201ENST00000336648 IL17DQ8TAD2 202 aa10.06□□□□□ -0.8
HLCS-201ENST00000336648 WFDC11Q8NEX6 87 aa10.06□□□□□ -0.8
HLCS-201ENST00000336648 MSRB1Q9NZV6 116 aa10.06□□□□□ -0.8
HLCS-201ENST00000336648 MT-ATP8P03928 68 aa10.05□□□□□ -0.8
HLCS-201ENST00000336648 SDIM1Q6ZPB5 146 aa10.05□□□□□ -0.8
HLCS-201ENST00000336648 FER1L5A0AVI2 2057 aa10.05□□□□□ -0.8
HLCS-201ENST00000336648 IGLV2-23P01705 113 aa10.05□□□□□ -0.8
HLCS-201ENST00000336648 GTSF1Q8WW33 167 aa10.05□□□□□ -0.8
HLCS-201ENST00000336648 VWA8A3KMH1 1905 aa10.05□□□□□ -0.8
HLCS-201ENST00000336648 FNDC1Q4ZHG4 1894 aaPredicted RBP10.05□□□□□ -0.8
HLCS-201ENST00000336648 C20orf203Q8NBC4 194 aa10.05□□□□□ -0.8
HLCS-201ENST00000336648 TMEM263Q8WUH6 116 aaKnown RBP10.05□□□□□ -0.8
HLCS-201ENST00000336648 TCF20Q9UGU0 1960 aaKnown RBP10.05□□□□□ -0.8
HLCS-201ENST00000336648 ABCA4P78363 2273 aa10.05□□□□□ -0.8
HLCS-201ENST00000336648 IGHV4-30-2A0A087WSY4 118 aa10.05□□□□□ -0.8
HLCS-201ENST00000336648 F8W735 103 aaPredicted RBP10.05□□□□□ -0.8
HLCS-201ENST00000336648 PTH2Q96A98 100 aa10.05□□□□□ -0.8
HLCS-201ENST00000336648 TCL1BO95988 128 aa10.04□□□□□ -0.8
HLCS-201ENST00000336648 ODF3Q96PU9 254 aa10.04□□□□□ -0.8
HLCS-201ENST00000336648 IGLV1-47P01700 117 aa10.04□□□□□ -0.8
HLCS-201ENST00000336648 SPTBN2O15020 2390 aa10.04□□□□□ -0.8
HLCS-201ENST00000336648 BLCAPP62952 87 aa10.04□□□□□ -0.8
HLCS-201ENST00000336648 NDUFA11Q86Y39 141 aa10.04□□□□□ -0.8
HLCS-201ENST00000336648 PRO0255Q9UI72 69 aa10.04□□□□□ -0.8
HLCS-201ENST00000336648 SPATA12Q7Z6I5 190 aa10.03□□□□□ -0.8
HLCS-201ENST00000336648 WNK2Q9Y3S1 2297 aa10.03□□□□□ -0.8
HLCS-201ENST00000336648 MDFICQ9P1T7 246 aa10.03□□□□□ -0.8
HLCS-201ENST00000336648 ODF1Q14990 250 aa10.03□□□□□ -0.8
HLCS-201ENST00000336648 DOCK11Q5JSL3 2073 aa10.03□□□□□ -0.8
HLCS-201ENST00000336648 TDRG1Q3Y452 100 aa10.03□□□□□ -0.8
HLCS-201ENST00000336648 DOCK9Q9BZ29 2069 aa10.03□□□□□ -0.8
HLCS-201ENST00000336648 RPL39P62891 51 aaKnown RBP10.02□□□□□ -0.8
HLCS-201ENST00000336648 MIR7-3HGQ8N6C7 128 aa10.02□□□□□ -0.8
HLCS-201ENST00000336648 SERP1Q9Y6X1 66 aa10.02□□□□□ -0.81
HLCS-201ENST00000336648 NUPR1O60356 82 aa10.02□□□□□ -0.81
HLCS-201ENST00000336648 TIMM17BO60830 172 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 141.5 ms