RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 NTF3P20783 257 aa9.88□□□□□ -0.83
APOBEC3B-202ENST00000335760 TWIST1Q15672 202 aa9.88□□□□□ -0.83
APOBEC3B-202ENST00000335760 FAM74A4Q5TZK3 123 aa9.88□□□□□ -0.83
APOBEC3B-202ENST00000335760 BORCS7Q96B45 105 aa9.88□□□□□ -0.83
APOBEC3B-202ENST00000335760 NAT8BQ9UHF3 227 aa9.88□□□□□ -0.83
APOBEC3B-202ENST00000335760 HHLA3Q9XRX5 114 aa9.88□□□□□ -0.83
APOBEC3B-202ENST00000335760 TRAV26-1A0A087WT03 109 aa9.88□□□□□ -0.83
APOBEC3B-202ENST00000335760 RHODO00212 210 aa9.88□□□□□ -0.83
APOBEC3B-202ENST00000335760 APOC3P02656 99 aa9.88□□□□□ -0.83
APOBEC3B-202ENST00000335760 CRYGDP07320 174 aa9.88□□□□□ -0.83
APOBEC3B-202ENST00000335760 SLAQ13239 276 aa9.88□□□□□ -0.83
APOBEC3B-202ENST00000335760 ZFP2Q6ZN57 461 aa9.88□□□□□ -0.83
APOBEC3B-202ENST00000335760 C14orf178Q8N769 122 aaPredicted RBP9.88□□□□□ -0.83
APOBEC3B-202ENST00000335760 CLRN3Q8NCR9 226 aa9.88□□□□□ -0.83
APOBEC3B-202ENST00000335760 NUP35Q8NFH5 326 aa9.88□□□□□ -0.83
APOBEC3B-202ENST00000335760 FAM210BQ96KR6 192 aa9.88□□□□□ -0.83
APOBEC3B-202ENST00000335760 AP1S3Q96PC3 154 aa9.88□□□□□ -0.83
APOBEC3B-202ENST00000335760 CNFNQ9BYD5 112 aa9.88□□□□□ -0.83
APOBEC3B-202ENST00000335760 PRO0255Q9UI72 69 aa9.88□□□□□ -0.83
APOBEC3B-202ENST00000335760 A0A1B0GUT8 65 aa9.87□□□□□ -0.83
APOBEC3B-202ENST00000335760 PAX4O43316 350 aa9.87□□□□□ -0.83
APOBEC3B-202ENST00000335760 TRGC1P0CF51 173 aa9.87□□□□□ -0.83
APOBEC3B-202ENST00000335760 SMIM17P0DL12 118 aa9.87□□□□□ -0.83
APOBEC3B-202ENST00000335760 CRYBA4P53673 196 aa9.87□□□□□ -0.83
APOBEC3B-202ENST00000335760 UFSP1Q6NVU6 142 aa9.87□□□□□ -0.83
APOBEC3B-202ENST00000335760 C7orf77A4D0Y5 90 aa9.86□□□□□ -0.83
APOBEC3B-202ENST00000335760 GATA1P15976 413 aaPredicted RBP9.86□□□□□ -0.83
APOBEC3B-202ENST00000335760 Q6ZSN1 163 aa9.86□□□□□ -0.83
APOBEC3B-202ENST00000335760 VSIG2Q96IQ7 327 aa9.86□□□□□ -0.83
APOBEC3B-202ENST00000335760 CTDSP1Q9GZU7 261 aa9.86□□□□□ -0.83
APOBEC3B-202ENST00000335760 NUDT3O95989 172 aa9.85□□□□□ -0.83
APOBEC3B-202ENST00000335760 EVI2AP22794 236 aa9.85□□□□□ -0.83
APOBEC3B-202ENST00000335760 RIGQ13278 110 aa9.85□□□□□ -0.83
APOBEC3B-202ENST00000335760 RHEBQ15382 184 aa9.85□□□□□ -0.83
APOBEC3B-202ENST00000335760 SVBPQ8N300 66 aa9.85□□□□□ -0.83
APOBEC3B-202ENST00000335760 APLNQ9ULZ1 77 aa9.85□□□□□ -0.83
APOBEC3B-202ENST00000335760 KIF25-AS1Q9Y6Z4 181 aa9.85□□□□□ -0.83
APOBEC3B-202ENST00000335760 MGPP08493 103 aa9.84□□□□□ -0.83
APOBEC3B-202ENST00000335760 TCTAP57738 103 aa9.84□□□□□ -0.83
APOBEC3B-202ENST00000335760 ZNF56Q15929 161 aa9.84□□□□□ -0.83
APOBEC3B-202ENST00000335760 SMIM15Q7Z3B0 74 aa9.84□□□□□ -0.83
APOBEC3B-202ENST00000335760 SLC25A29Q8N8R3 303 aa9.84□□□□□ -0.83
APOBEC3B-202ENST00000335760 C15orf53Q8NAA6 179 aa9.84□□□□□ -0.83
APOBEC3B-202ENST00000335760 RPS10P5Q9NQ39 176 aa9.84□□□□□ -0.83
APOBEC3B-202ENST00000335760 TRBV6-4A0A1B0GX49 114 aa9.83□□□□□ -0.84
APOBEC3B-202ENST00000335760 F5H697 171 aa9.83□□□□□ -0.84
APOBEC3B-202ENST00000335760 H3BNG1 76 aa9.83□□□□□ -0.84
APOBEC3B-202ENST00000335760 SNAPINO95295 136 aa9.83□□□□□ -0.84
APOBEC3B-202ENST00000335760 FAM3BP58499 235 aaPredicted RBP9.83□□□□□ -0.84
APOBEC3B-202ENST00000335760 RAB4BP61018 213 aa9.83□□□□□ -0.84
APOBEC3B-202ENST00000335760 DPH3P1Q9H4G8 78 aa9.83□□□□□ -0.84
APOBEC3B-202ENST00000335760 A0A087WWC5 75 aa9.82□□□□□ -0.84
APOBEC3B-202ENST00000335760 LOC100131303A0A0U1RQF7 123 aa9.82□□□□□ -0.84
APOBEC3B-202ENST00000335760 GYPEP15421 78 aa9.82□□□□□ -0.84
APOBEC3B-202ENST00000335760 LINC00315P59091 139 aa9.82□□□□□ -0.84
APOBEC3B-202ENST00000335760 RHOHQ15669 191 aa9.82□□□□□ -0.84
APOBEC3B-202ENST00000335760 MRPL54Q6P161 138 aaKnown RBP9.82□□□□□ -0.84
APOBEC3B-202ENST00000335760 IMMP2LQ96T52 175 aa9.82□□□□□ -0.84
APOBEC3B-202ENST00000335760 PRADC1Q9BSG0 188 aa9.82□□□□□ -0.84
APOBEC3B-202ENST00000335760 TMEM242Q9NWH2 141 aa9.82□□□□□ -0.84
APOBEC3B-202ENST00000335760 K7EQD1 137 aa9.81□□□□□ -0.84
APOBEC3B-202ENST00000335760 KCNIP4Q6PIL6 250 aa9.81□□□□□ -0.84
APOBEC3B-202ENST00000335760 ICOSQ9Y6W8 199 aa9.81□□□□□ -0.84
APOBEC3B-202ENST00000335760 A0A1B0GW15 77 aa9.8□□□□□ -0.84
APOBEC3B-202ENST00000335760 CAMPP49913 170 aa9.8□□□□□ -0.84
APOBEC3B-202ENST00000335760 A0A096LPF7 62 aa9.79□□□□□ -0.84
APOBEC3B-202ENST00000335760 P0DMU3 169 aa9.79□□□□□ -0.84
APOBEC3B-202ENST00000335760 FAM231AP0DMU4 169 aa9.79□□□□□ -0.84
APOBEC3B-202ENST00000335760 FAM231CP0DMU5 169 aa9.79□□□□□ -0.84
APOBEC3B-202ENST00000335760 S100PP25815 95 aa9.79□□□□□ -0.84
APOBEC3B-202ENST00000335760 HBBP68871 147 aa9.79□□□□□ -0.84
APOBEC3B-202ENST00000335760 MRPL23Q16540 153 aaKnown RBP9.79□□□□□ -0.84
APOBEC3B-202ENST00000335760 SUMO4Q6EEV6 95 aa9.79□□□□□ -0.84
APOBEC3B-202ENST00000335760 ATP5L2Q7Z4Y8 100 aa9.79□□□□□ -0.84
APOBEC3B-202ENST00000335760 BTF3L4Q96K17 158 aa9.79□□□□□ -0.84
APOBEC3B-202ENST00000335760 TMEM191AQ9H0A3 160 aa9.79□□□□□ -0.84
APOBEC3B-202ENST00000335760 Q9UF83 564 aa9.79□□□□□ -0.84
APOBEC3B-202ENST00000335760 A0A1B0GXF2 115 aa9.78□□□□□ -0.84
APOBEC3B-202ENST00000335760 GAGE12JA6NER3 117 aa9.78□□□□□ -0.84
APOBEC3B-202ENST00000335760 S100A8P05109 93 aa9.78□□□□□ -0.84
APOBEC3B-202ENST00000335760 SRIP30626 198 aa9.78□□□□□ -0.84
APOBEC3B-202ENST00000335760 GAGE1Q13065 139 aa9.78□□□□□ -0.84
APOBEC3B-202ENST00000335760 GAGE4Q13068 117 aa9.78□□□□□ -0.84
APOBEC3B-202ENST00000335760 GAGE5Q13069 117 aa9.78□□□□□ -0.84
APOBEC3B-202ENST00000335760 GAGE13Q4V321 117 aa9.78□□□□□ -0.84
APOBEC3B-202ENST00000335760 ATRAIDQ6UW56 229 aa9.78□□□□□ -0.84
APOBEC3B-202ENST00000335760 AMN1Q8IY45 258 aa9.77□□□□□ -0.84
APOBEC3B-202ENST00000335760 URGCP-MRPS24S4R325 110 aa9.77□□□□□ -0.84
APOBEC3B-202ENST00000335760 TENM2Q9NT68 2774 aa9.76□□□□□ -0.85
APOBEC3B-202ENST00000335760 TRAV9-1A0A075B6T8 112 aa9.76□□□□□ -0.85
APOBEC3B-202ENST00000335760 TRAV26-2A0A0B4J265 109 aa9.76□□□□□ -0.85
APOBEC3B-202ENST00000335760 TRBV10-1A0A0K0K1A3 114 aa9.76□□□□□ -0.85
APOBEC3B-202ENST00000335760 H7C1H1 209 aa9.76□□□□□ -0.85
APOBEC3B-202ENST00000335760 M0QY20 66 aa9.76□□□□□ -0.85
APOBEC3B-202ENST00000335760 RAB4AP20338 218 aa9.76□□□□□ -0.85
APOBEC3B-202ENST00000335760 NEGR1Q7Z3B1 354 aa9.76□□□□□ -0.85
APOBEC3B-202ENST00000335760 RNF185Q96GF1 192 aa9.76□□□□□ -0.85
APOBEC3B-202ENST00000335760 RPL36AP83881 106 aaKnown RBP9.75□□□□□ -0.85
APOBEC3B-202ENST00000335760 RASL11AQ6T310 242 aa9.75□□□□□ -0.85
APOBEC3B-202ENST00000335760 GATD1Q8NB37 220 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms