RNA–Protein interactions for RNA: ENST00000332556.4

LAMP1-201, Transcript of lysosomal associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMP1, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-201ENST00000332556 AKAP9Q99996 3911 aa14.29□□□□□ -0.12
LAMP1-201ENST00000332556 IGLV1-40P01703 118 aa14.28□□□□□ -0.12
LAMP1-201ENST00000332556 RASL10AQ92737 203 aa14.28□□□□□ -0.12
LAMP1-201ENST00000332556 BEX4Q9NWD9 120 aaPredicted RBP14.28□□□□□ -0.12
LAMP1-201ENST00000332556 WNK1Q9H4A3 2382 aa14.28□□□□□ -0.12
LAMP1-201ENST00000332556 PRSS47A8MTI9 375 aa14.28□□□□□ -0.12
LAMP1-201ENST00000332556 LGALS1P09382 135 aaKnown RBP14.28□□□□□ -0.12
LAMP1-201ENST00000332556 EMP1P54849 157 aa14.28□□□□□ -0.12
LAMP1-201ENST00000332556 SCGB2A2Q13296 93 aa14.28□□□□□ -0.12
LAMP1-201ENST00000332556 TAL2Q16559 108 aa14.28□□□□□ -0.12
LAMP1-201ENST00000332556 USMG5Q96IX5 58 aa14.28□□□□□ -0.12
LAMP1-201ENST00000332556 DAZ1Q9NQZ3 744 aaKnown RBP14.28□□□□□ -0.12
LAMP1-201ENST00000332556 CHD6Q8TD26 2715 aa14.28□□□□□ -0.12
LAMP1-201ENST00000332556 PRRC2AP48634 2157 aaKnown RBP14.27□□□□□ -0.12
LAMP1-201ENST00000332556 SUMO2P61956 95 aaKnown RBP14.27□□□□□ -0.12
LAMP1-201ENST00000332556 MORN3Q6PF18 240 aaPredicted RBP14.27□□□□□ -0.12
LAMP1-201ENST00000332556 PGPEP1Q9NXJ5 209 aa14.27□□□□□ -0.12
LAMP1-201ENST00000332556 PRO0461Q9UI25 63 aa14.27□□□□□ -0.12
LAMP1-201ENST00000332556 PHLDA3Q9Y5J5 127 aa14.27□□□□□ -0.12
LAMP1-201ENST00000332556 TRAV12-3A0A0B4J271 114 aa14.27□□□□□ -0.13
LAMP1-201ENST00000332556 A0A1B0GWB2 263 aa14.27□□□□□ -0.13
LAMP1-201ENST00000332556 C18orf65Q6ZTR6 163 aa14.27□□□□□ -0.13
LAMP1-201ENST00000332556 PLEKHB2Q96CS7 222 aa14.27□□□□□ -0.13
LAMP1-201ENST00000332556 MRPL53Q96EL3 112 aaKnown RBP14.27□□□□□ -0.13
LAMP1-201ENST00000332556 DEFB136Q30KP8 78 aa14.26□□□□□ -0.13
LAMP1-201ENST00000332556 DUX3Q96PT4 197 aa14.26□□□□□ -0.13
LAMP1-201ENST00000332556 PRADC1Q9BSG0 188 aa14.26□□□□□ -0.13
LAMP1-201ENST00000332556 NEXN-AS1Q8NBZ9 246 aa14.26□□□□□ -0.13
LAMP1-201ENST00000332556 KLHL30-AS1Q8NEE0 82 aa14.26□□□□□ -0.13
LAMP1-201ENST00000332556 SYNJ2BPP57105 145 aa14.25□□□□□ -0.13
LAMP1-201ENST00000332556 C2orf66Q6UXQ4 117 aa14.25□□□□□ -0.13
LAMP1-201ENST00000332556 BAALCQ8WXS3 180 aa14.25□□□□□ -0.13
LAMP1-201ENST00000332556 IGHV4-4A0A075B6R2 117 aa14.25□□□□□ -0.13
LAMP1-201ENST00000332556 CFHR3Q02985 330 aa14.25□□□□□ -0.13
LAMP1-201ENST00000332556 TOMM6Q96B49 74 aa14.25□□□□□ -0.13
LAMP1-201ENST00000332556 MRAP2Q96G30 205 aa14.25□□□□□ -0.13
LAMP1-201ENST00000332556 LINC00477Q96M19 166 aa14.25□□□□□ -0.13
LAMP1-201ENST00000332556 MRPL16Q9NX20 251 aaKnown RBP14.25□□□□□ -0.13
LAMP1-201ENST00000332556 NOTCH3Q9UM47 2321 aa14.24□□□□□ -0.13
LAMP1-201ENST00000332556 A0A087WWL8 130 aa14.24□□□□□ -0.13
LAMP1-201ENST00000332556 TRAV12-1A0A0B4J245 112 aa14.24□□□□□ -0.13
LAMP1-201ENST00000332556 TRAV21A0A0B4J279 112 aa14.24□□□□□ -0.13
LAMP1-201ENST00000332556 PRSS29PA6NIE9 313 aa14.24□□□□□ -0.13
LAMP1-201ENST00000332556 J3QR89 54 aa14.24□□□□□ -0.13
LAMP1-201ENST00000332556 HOXA3O43365 443 aaPredicted RBP14.24□□□□□ -0.13
LAMP1-201ENST00000332556 SCGB1D4Q6XE38 83 aa14.24□□□□□ -0.13
LAMP1-201ENST00000332556 ZNF815PA8K554 130 aa14.24□□□□□ -0.13
LAMP1-201ENST00000332556 CIDEAO60543 219 aa14.24□□□□□ -0.13
LAMP1-201ENST00000332556 RNASE3P12724 160 aaKnown RBP14.24□□□□□ -0.13
LAMP1-201ENST00000332556 SLC25A16P16260 332 aa14.24□□□□□ -0.13
LAMP1-201ENST00000332556 C20orf78Q9BR46 151 aa14.24□□□□□ -0.13
LAMP1-201ENST00000332556 ASIPP42127 132 aa14.23□□□□□ -0.13
LAMP1-201ENST00000332556 ORMDL2Q53FV1 153 aa14.23□□□□□ -0.13
LAMP1-201ENST00000332556 LINC01549A6NIU2 74 aa14.23□□□□□ -0.13
LAMP1-201ENST00000332556 OVOL1O14753 267 aa14.23□□□□□ -0.13
LAMP1-201ENST00000332556 PRM2P04554 102 aa14.23□□□□□ -0.13
LAMP1-201ENST00000332556 PSMB8P28062 276 aa14.23□□□□□ -0.13
LAMP1-201ENST00000332556 ACANP16112 2415 aa14.22□□□□□ -0.13
LAMP1-201ENST00000332556 LOC107984156A0A0G2JMH3 177 aa14.22□□□□□ -0.13
LAMP1-201ENST00000332556 HIST2H2BCQ6DN03 193 aa14.22□□□□□ -0.13
LAMP1-201ENST00000332556 ARL17AQ8IVW1 177 aa14.22□□□□□ -0.13
LAMP1-201ENST00000332556 LINC01356Q8N9X3 169 aa14.22□□□□□ -0.13
LAMP1-201ENST00000332556 HTN1P15515 57 aa14.21□□□□□ -0.13
LAMP1-201ENST00000332556 SRSF9Q13242 221 aaKnown RBP eCLIP14.21□□□□□ -0.13
LAMP1-201ENST00000332556 ZFP2Q6ZN57 461 aa14.21□□□□□ -0.13
LAMP1-201ENST00000332556 DCANP1Q8TF63 244 aa14.21□□□□□ -0.13
LAMP1-201ENST00000332556 DUSP14O95147 198 aaKnown RBP14.21□□□□□ -0.13
LAMP1-201ENST00000332556 APOMO95445 188 aa14.21□□□□□ -0.13
LAMP1-201ENST00000332556 SPATA25Q9BR10 227 aa14.21□□□□□ -0.13
LAMP1-201ENST00000332556 ITPR3Q14573 2671 aa14.21□□□□□ -0.13
LAMP1-201ENST00000332556 DPH3P1Q9H4G8 78 aa14.2□□□□□ -0.14
LAMP1-201ENST00000332556 IGHV4OR15-8A0A075B7B6 117 aa14.2□□□□□ -0.14
LAMP1-201ENST00000332556 A0A087WW49 117 aa14.2□□□□□ -0.14
LAMP1-201ENST00000332556 A0A096LNT2 108 aa14.2□□□□□ -0.14
LAMP1-201ENST00000332556 CD7P09564 240 aa14.2□□□□□ -0.14
LAMP1-201ENST00000332556 PSMB2P49721 201 aa14.2□□□□□ -0.14
LAMP1-201ENST00000332556 SMCPP49901 116 aaPredicted RBP14.2□□□□□ -0.14
LAMP1-201ENST00000332556 FAM74A4Q5TZK3 123 aa14.2□□□□□ -0.14
LAMP1-201ENST00000332556 ZNF418Q8TF45 676 aaPredicted RBP14.2□□□□□ -0.14
LAMP1-201ENST00000332556 TENM4Q6N022 2769 aa14.2□□□□□ -0.14
LAMP1-201ENST00000332556 PTH2Q96A98 100 aa14.19□□□□□ -0.14
LAMP1-201ENST00000332556 SPINK13Q1W4C9 94 aa14.19□□□□□ -0.14
LAMP1-201ENST00000332556 COX6B1P14854 86 aa14.18□□□□□ -0.14
LAMP1-201ENST00000332556 H3BUA1 57 aa14.18□□□□□ -0.14
LAMP1-201ENST00000332556 MDFICQ9P1T7 246 aa14.18□□□□□ -0.14
LAMP1-201ENST00000332556 FLNAP21333 2647 aaKnown RBP14.18□□□□□ -0.14
LAMP1-201ENST00000332556 FAM19A4Q96LR4 140 aa14.18□□□□□ -0.14
LAMP1-201ENST00000332556 CR1P17927 2039 aa14.17□□□□□ -0.14
LAMP1-201ENST00000332556 NFE4Q86UQ8 179 aa14.17□□□□□ -0.14
LAMP1-201ENST00000332556 C11orf86A6NJI1 115 aa14.17□□□□□ -0.14
LAMP1-201ENST00000332556 TSPAN13O95857 204 aa14.17□□□□□ -0.14
LAMP1-201ENST00000332556 CRYGDP07320 174 aa14.17□□□□□ -0.14
LAMP1-201ENST00000332556 MTORP42345 2549 aa14.16□□□□□ -0.14
LAMP1-201ENST00000332556 F5H697 171 aa14.16□□□□□ -0.14
LAMP1-201ENST00000332556 RPL39P62891 51 aaKnown RBP14.16□□□□□ -0.14
LAMP1-201ENST00000332556 FAM159AQ6UWV7 190 aa14.16□□□□□ -0.14
LAMP1-201ENST00000332556 SYT8Q8NBV8 401 aa14.16□□□□□ -0.14
LAMP1-201ENST00000332556 ATP6V0BQ99437 205 aa14.16□□□□□ -0.14
LAMP1-201ENST00000332556 SCGB1A1P11684 91 aa14.16□□□□□ -0.14
LAMP1-201ENST00000332556 SLURP1P55000 103 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms