RNA–Protein interactions for RNA: ENST00000332246.10

CSGALNACT1-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 3,872 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-201ENST00000332246 COL5A1P20908 1838 aaPredicted RBP7.53□□□□□ -1.2
CSGALNACT1-201ENST00000332246 USP24Q9UPU5 2620 aa7.53□□□□□ -1.2
CSGALNACT1-201ENST00000332246 PRB1P04280 392 aa7.53□□□□□ -1.2
CSGALNACT1-201ENST00000332246 CIRBPQ14011 172 aaKnown RBP7.53□□□□□ -1.2
CSGALNACT1-201ENST00000332246 GAGE12HA6NDE8 117 aa7.53□□□□□ -1.2
CSGALNACT1-201ENST00000332246 IGLL5B9A064 214 aa7.53□□□□□ -1.2
CSGALNACT1-201ENST00000332246 NBL1P41271 181 aa7.53□□□□□ -1.2
CSGALNACT1-201ENST00000332246 C11orf21Q9P2W6 132 aa7.53□□□□□ -1.2
CSGALNACT1-201ENST00000332246 IGHV4-30-2A0A087WSY4 118 aa7.52□□□□□ -1.2
CSGALNACT1-201ENST00000332246 A0A0J9YXV3 536 aa7.52□□□□□ -1.2
CSGALNACT1-201ENST00000332246 LINC00574Q9H8X3 128 aa7.52□□□□□ -1.2
CSGALNACT1-201ENST00000332246 CCDC140Q96MF4 163 aa7.52□□□□□ -1.21
CSGALNACT1-201ENST00000332246 TSPAN13O95857 204 aa7.52□□□□□ -1.21
CSGALNACT1-201ENST00000332246 MSMBP08118 114 aa7.52□□□□□ -1.21
CSGALNACT1-201ENST00000332246 PAPPA-AS1Q5QFB9 102 aa7.52□□□□□ -1.21
CSGALNACT1-201ENST00000332246 C8orf31Q8N9H6 132 aa7.52□□□□□ -1.21
CSGALNACT1-201ENST00000332246 ANAPC13Q9BS18 74 aa7.52□□□□□ -1.21
CSGALNACT1-201ENST00000332246 RBAKDNA6NC62 111 aa7.52□□□□□ -1.21
CSGALNACT1-201ENST00000332246 TCTEX1D4Q5JR98 221 aa7.52□□□□□ -1.21
CSGALNACT1-201ENST00000332246 APRG1Q8IVJ8 170 aa7.52□□□□□ -1.21
CSGALNACT1-201ENST00000332246 MDFICQ9P1T7 246 aa7.52□□□□□ -1.21
CSGALNACT1-201ENST00000332246 PCSK5Q92824 1860 aa7.51□□□□□ -1.21
CSGALNACT1-201ENST00000332246 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.51□□□□□ -1.21
CSGALNACT1-201ENST00000332246 IGKV2-29A2NJV5 120 aaPredicted RBP7.51□□□□□ -1.21
CSGALNACT1-201ENST00000332246 PMVKQ15126 192 aa7.51□□□□□ -1.21
CSGALNACT1-201ENST00000332246 C2orf91Q6ZV80 131 aa7.51□□□□□ -1.21
CSGALNACT1-201ENST00000332246 STHQ8IWL8 128 aa7.51□□□□□ -1.21
CSGALNACT1-201ENST00000332246 NPBQ8NG41 125 aa7.51□□□□□ -1.21
CSGALNACT1-201ENST00000332246 MUC4Q99102 2169 aa7.51□□□□□ -1.21
CSGALNACT1-201ENST00000332246 B4DSR2 109 aa7.51□□□□□ -1.21
CSGALNACT1-201ENST00000332246 TMEM238C9JI98 176 aa7.51□□□□□ -1.21
CSGALNACT1-201ENST00000332246 CRYGBP07316 175 aa7.51□□□□□ -1.21
CSGALNACT1-201ENST00000332246 P0DMU3 169 aa7.51□□□□□ -1.21
CSGALNACT1-201ENST00000332246 FAM231AP0DMU4 169 aa7.51□□□□□ -1.21
CSGALNACT1-201ENST00000332246 FAM231CP0DMU5 169 aa7.51□□□□□ -1.21
CSGALNACT1-201ENST00000332246 Q6ZS46 218 aa7.51□□□□□ -1.21
CSGALNACT1-201ENST00000332246 COL4A2P08572 1712 aa7.51□□□□□ -1.21
CSGALNACT1-201ENST00000332246 RAI1Q7Z5J4 1906 aaPredicted RBP7.51□□□□□ -1.21
CSGALNACT1-201ENST00000332246 INS-IGF2F8WCM5 200 aa7.51□□□□□ -1.21
CSGALNACT1-201ENST00000332246 C19orf84I3L1E1 186 aa7.51□□□□□ -1.21
CSGALNACT1-201ENST00000332246 DEFB112Q30KQ8 113 aa7.51□□□□□ -1.21
CSGALNACT1-201ENST00000332246 NSUN5P1Q3KNT7 163 aa7.51□□□□□ -1.21
CSGALNACT1-201ENST00000332246 TEX29Q8N6K0 151 aa7.51□□□□□ -1.21
CSGALNACT1-201ENST00000332246 TIMM21Q9BVV7 248 aa7.51□□□□□ -1.21
CSGALNACT1-201ENST00000332246 M0R2P5 195 aa7.5□□□□□ -1.21
CSGALNACT1-201ENST00000332246 TRBV7-9A0A0J9YWB2 115 aa7.5□□□□□ -1.21
CSGALNACT1-201ENST00000332246 C11orf86A6NJI1 115 aa7.5□□□□□ -1.21
CSGALNACT1-201ENST00000332246 J3QQQ9 107 aa7.5□□□□□ -1.21
CSGALNACT1-201ENST00000332246 EDN2P20800 178 aa7.5□□□□□ -1.21
CSGALNACT1-201ENST00000332246 ZFP2Q6ZN57 461 aa7.5□□□□□ -1.21
CSGALNACT1-201ENST00000332246 C2orf82Q6UX34 121 aa7.5□□□□□ -1.21
CSGALNACT1-201ENST00000332246 GATD1Q8NB37 220 aa7.5□□□□□ -1.21
CSGALNACT1-201ENST00000332246 C20orf173Q96LM9 149 aa7.5□□□□□ -1.21
CSGALNACT1-201ENST00000332246 CHCHD5Q9BSY4 110 aa7.5□□□□□ -1.21
CSGALNACT1-201ENST00000332246 A0A096LPF7 62 aa7.49□□□□□ -1.21
CSGALNACT1-201ENST00000332246 GAGE12JA6NER3 117 aa7.49□□□□□ -1.21
CSGALNACT1-201ENST00000332246 DEFB130BP0DP73 79 aa7.49□□□□□ -1.21
CSGALNACT1-201ENST00000332246 DEFB130AP0DP74 79 aa7.49□□□□□ -1.21
CSGALNACT1-201ENST00000332246 GAGE4Q13068 117 aa7.49□□□□□ -1.21
CSGALNACT1-201ENST00000332246 GAGE5Q13069 117 aa7.49□□□□□ -1.21
CSGALNACT1-201ENST00000332246 C20orf78Q9BR46 151 aa7.49□□□□□ -1.21
CSGALNACT1-201ENST00000332246 ZNF292O60281 2723 aa7.49□□□□□ -1.21
CSGALNACT1-201ENST00000332246 TNRC6BQ9UPQ9 1833 aaKnown RBP7.49□□□□□ -1.21
CSGALNACT1-201ENST00000332246 TRBV20-1A0A075B6N2 111 aa7.49□□□□□ -1.21
CSGALNACT1-201ENST00000332246 IGHV7-4-1A0A0J9YVY3 117 aa7.49□□□□□ -1.21
CSGALNACT1-201ENST00000332246 FAM223BA6NKX1 122 aa7.49□□□□□ -1.21
CSGALNACT1-201ENST00000332246 SUMO4Q6EEV6 95 aa7.49□□□□□ -1.21
CSGALNACT1-201ENST00000332246 FAM223AQ8IWN6 122 aa7.49□□□□□ -1.21
CSGALNACT1-201ENST00000332246 C3orf56Q8N813 242 aa7.49□□□□□ -1.21
CSGALNACT1-201ENST00000332246 PLEKHB2Q96CS7 222 aa7.49□□□□□ -1.21
CSGALNACT1-201ENST00000332246 USMG5Q96IX5 58 aa7.49□□□□□ -1.21
CSGALNACT1-201ENST00000332246 PRR9Q5T870 116 aa7.49□□□□□ -1.21
CSGALNACT1-201ENST00000332246 C5orf56Q8N8D9 126 aa7.49□□□□□ -1.21
CSGALNACT1-201ENST00000332246 ZNRF2Q8NHG8 242 aa7.49□□□□□ -1.21
CSGALNACT1-201ENST00000332246 FLNBO75369 2602 aaKnown RBP7.48□□□□□ -1.21
CSGALNACT1-201ENST00000332246 IGHV1OR15-1A0A075B7D0 117 aa7.48□□□□□ -1.21
CSGALNACT1-201ENST00000332246 NDUFA4O00483 81 aa7.48□□□□□ -1.21
CSGALNACT1-201ENST00000332246 DNAL4O96015 105 aa7.48□□□□□ -1.21
CSGALNACT1-201ENST00000332246 TRGV4A0A0C4DH28 118 aa7.48□□□□□ -1.21
CSGALNACT1-201ENST00000332246 SLURP1P55000 103 aa7.48□□□□□ -1.21
CSGALNACT1-201ENST00000332246 LINC00158P58513 81 aa7.48□□□□□ -1.21
CSGALNACT1-201ENST00000332246 GAGE2BQ13066 116 aa7.48□□□□□ -1.21
CSGALNACT1-201ENST00000332246 LINC01559Q495D7 138 aa7.48□□□□□ -1.21
CSGALNACT1-201ENST00000332246 GAGE2EQ4V326 116 aa7.48□□□□□ -1.21
CSGALNACT1-201ENST00000332246 Q8N1Y9 231 aa7.48□□□□□ -1.21
CSGALNACT1-201ENST00000332246 NTN5Q8WTR8 489 aaPredicted RBP7.48□□□□□ -1.21
CSGALNACT1-201ENST00000332246 GAGE2DQ9UEU5 116 aa7.48□□□□□ -1.21
CSGALNACT1-201ENST00000332246 A4D1N5 150 aa7.48□□□□□ -1.21
CSGALNACT1-201ENST00000332246 PRIMA1Q86XR5 153 aa7.48□□□□□ -1.21
CSGALNACT1-201ENST00000332246 RNF185Q96GF1 192 aa7.48□□□□□ -1.21
CSGALNACT1-201ENST00000332246 FOXI2Q6ZQN5 318 aa7.47□□□□□ -1.21
CSGALNACT1-201ENST00000332246 BAALCQ8WXS3 180 aa7.47□□□□□ -1.21
CSGALNACT1-201ENST00000332246 IGLC6P0CF74 106 aa7.47□□□□□ -1.21
CSGALNACT1-201ENST00000332246 PFN2P35080 140 aa7.47□□□□□ -1.21
CSGALNACT1-201ENST00000332246 INSL3P51460 131 aa7.47□□□□□ -1.21
CSGALNACT1-201ENST00000332246 IGF2-ASQ6U949 168 aa7.47□□□□□ -1.21
CSGALNACT1-201ENST00000332246 LRBAP50851 2863 aa7.47□□□□□ -1.21
CSGALNACT1-201ENST00000332246 A0A1W2PPR1 153 aa7.47□□□□□ -1.21
CSGALNACT1-201ENST00000332246 PRO1854Q9UHT4 67 aa7.47□□□□□ -1.21
CSGALNACT1-201ENST00000332246 NDUFA12Q9UI09 145 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms