RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 PDE6HQ13956 83 aa11.96□□□□□ -0.49
PDGFB-201ENST00000331163 LINC01545Q5VT33 79 aa11.96□□□□□ -0.49
PDGFB-201ENST00000331163 SFTA2Q6UW10 78 aa11.96□□□□□ -0.49
PDGFB-201ENST00000331163 PRELID3AQ96N28 172 aa11.96□□□□□ -0.49
PDGFB-201ENST00000331163 OR11H12B2RN74 326 aa11.96□□□□□ -0.49
PDGFB-201ENST00000331163 DKK2Q9UBU2 259 aa11.96□□□□□ -0.49
PDGFB-201ENST00000331163 K7EP34 96 aa11.96□□□□□ -0.5
PDGFB-201ENST00000331163 SMIM17P0DL12 118 aa11.96□□□□□ -0.5
PDGFB-201ENST00000331163 MSRB1Q9NZV6 116 aa11.96□□□□□ -0.5
PDGFB-201ENST00000331163 IGHV3-53P01767 116 aa11.95□□□□□ -0.5
PDGFB-201ENST00000331163 EVI2AP22794 236 aa11.95□□□□□ -0.5
PDGFB-201ENST00000331163 CFHR3Q02985 330 aa11.95□□□□□ -0.5
PDGFB-201ENST00000331163 SAMD5Q5TGI4 173 aa11.95□□□□□ -0.5
PDGFB-201ENST00000331163 G3V4G9 280 aa11.95□□□□□ -0.5
PDGFB-201ENST00000331163 CKS2P33552 79 aa11.95□□□□□ -0.5
PDGFB-201ENST00000331163 C4orf3Q8WVX3 66 aa11.95□□□□□ -0.5
PDGFB-201ENST00000331163 AZU1P20160 251 aa11.94□□□□□ -0.5
PDGFB-201ENST00000331163 SIGLEC8Q9NYZ4 499 aa11.94□□□□□ -0.5
PDGFB-201ENST00000331163 A0A087WWL8 130 aa11.94□□□□□ -0.5
PDGFB-201ENST00000331163 CIDEAO60543 219 aa11.94□□□□□ -0.5
PDGFB-201ENST00000331163 TMEM86BQ8N661 226 aa11.94□□□□□ -0.5
PDGFB-201ENST00000331163 H3BRM9 83 aa11.93□□□□□ -0.5
PDGFB-201ENST00000331163 DEFB121Q5J5C9 76 aa11.93□□□□□ -0.5
PDGFB-201ENST00000331163 AMTNQ6UX39 209 aa11.93□□□□□ -0.5
PDGFB-201ENST00000331163 LINC00482Q8N8I6 264 aa11.93□□□□□ -0.5
PDGFB-201ENST00000331163 MLST8Q9BVC4 326 aa11.93□□□□□ -0.5
PDGFB-201ENST00000331163 TRAV8-2A0A0B4J237 113 aa11.93□□□□□ -0.5
PDGFB-201ENST00000331163 A0A1W2PPM0 123 aa11.93□□□□□ -0.5
PDGFB-201ENST00000331163 LTAP01374 205 aa11.93□□□□□ -0.5
PDGFB-201ENST00000331163 HTN3P15516 51 aa11.93□□□□□ -0.5
PDGFB-201ENST00000331163 LYPD1Q8N2G4 141 aa11.93□□□□□ -0.5
PDGFB-201ENST00000331163 DEFB4AO15263 64 aa11.92□□□□□ -0.5
PDGFB-201ENST00000331163 SMIM13P0DJ93 91 aa11.92□□□□□ -0.5
PDGFB-201ENST00000331163 HSD52Q0P140 79 aa11.92□□□□□ -0.5
PDGFB-201ENST00000331163 ANXA2RQ3ZCQ2 193 aa11.92□□□□□ -0.5
PDGFB-201ENST00000331163 GTSCR1Q86UQ5 136 aa11.92□□□□□ -0.5
PDGFB-201ENST00000331163 IFI27L1Q96BM0 104 aa11.92□□□□□ -0.5
PDGFB-201ENST00000331163 C19orf71A6NCJ1 209 aa11.92□□□□□ -0.5
PDGFB-201ENST00000331163 FXYD2P54710 66 aa11.92□□□□□ -0.5
PDGFB-201ENST00000331163 OXLD1Q5BKU9 147 aa11.92□□□□□ -0.5
PDGFB-201ENST00000331163 SH2D6Q7Z4S9 175 aa11.92□□□□□ -0.5
PDGFB-201ENST00000331163 ADAMTSL5Q6ZMM2 481 aa11.91□□□□□ -0.5
PDGFB-201ENST00000331163 MRAPQ8TCY5 172 aa11.91□□□□□ -0.5
PDGFB-201ENST00000331163 C14orf178Q8N769 122 aaPredicted RBP11.91□□□□□ -0.5
PDGFB-201ENST00000331163 RPS20P60866 119 aaKnown RBP11.91□□□□□ -0.5
PDGFB-201ENST00000331163 TRAV26-2A0A0B4J265 109 aa11.9□□□□□ -0.5
PDGFB-201ENST00000331163 ETDBQ3ZM63 59 aa11.9□□□□□ -0.5
PDGFB-201ENST00000331163 TMEM160Q9NX00 188 aa11.9□□□□□ -0.5
PDGFB-201ENST00000331163 MUC4Q99102 2169 aa11.9□□□□□ -0.5
PDGFB-201ENST00000331163 IGHV3-16A0A0C4DH30 117 aa11.9□□□□□ -0.51
PDGFB-201ENST00000331163 TRAV21A0A0B4J279 112 aa11.89□□□□□ -0.51
PDGFB-201ENST00000331163 ASIPP42127 132 aa11.89□□□□□ -0.51
PDGFB-201ENST00000331163 WFDC2Q14508 124 aa11.89□□□□□ -0.51
PDGFB-201ENST00000331163 UFSP1Q6NVU6 142 aa11.89□□□□□ -0.51
PDGFB-201ENST00000331163 ZNF56Q15929 161 aa11.89□□□□□ -0.51
PDGFB-201ENST00000331163 ORMDL3Q8N138 153 aa11.89□□□□□ -0.51
PDGFB-201ENST00000331163 KLF12Q9Y4X4 402 aa11.89□□□□□ -0.51
PDGFB-201ENST00000331163 HBDP02042 147 aa11.88□□□□□ -0.51
PDGFB-201ENST00000331163 MYCNOSP40205 109 aa11.88□□□□□ -0.51
PDGFB-201ENST00000331163 CRIP1P50238 77 aa11.88□□□□□ -0.51
PDGFB-201ENST00000331163 DEFB114Q30KQ6 69 aa11.88□□□□□ -0.51
PDGFB-201ENST00000331163 MRPS12O15235 138 aaKnown RBP11.88□□□□□ -0.51
PDGFB-201ENST00000331163 NPYP01303 97 aa11.88□□□□□ -0.51
PDGFB-201ENST00000331163 H3BMG7 143 aa11.88□□□□□ -0.51
PDGFB-201ENST00000331163 FGF6P10767 208 aa11.88□□□□□ -0.51
PDGFB-201ENST00000331163 PRR9Q5T870 116 aa11.88□□□□□ -0.51
PDGFB-201ENST00000331163 SIGMAR1Q99720 223 aa11.88□□□□□ -0.51
PDGFB-201ENST00000331163 ZNF492Q9P255 531 aa11.88□□□□□ -0.51
PDGFB-201ENST00000331163 IGKV2D-26A0A0A0MRZ7 120 aa11.87□□□□□ -0.51
PDGFB-201ENST00000331163 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.87□□□□□ -0.51
PDGFB-201ENST00000331163 C19orf54Q5BKX5 351 aa11.87□□□□□ -0.51
PDGFB-201ENST00000331163 LEPP41159 167 aa11.87□□□□□ -0.51
PDGFB-201ENST00000331163 IGLV2-11P01706 119 aa11.86□□□□□ -0.51
PDGFB-201ENST00000331163 GATA1P15976 413 aaPredicted RBP11.86□□□□□ -0.51
PDGFB-201ENST00000331163 PROK1P58294 105 aa11.86□□□□□ -0.51
PDGFB-201ENST00000331163 CT83Q5H943 113 aa11.86□□□□□ -0.51
PDGFB-201ENST00000331163 BOD1L2Q8IYS8 172 aa11.86□□□□□ -0.51
PDGFB-201ENST00000331163 JPT2Q9H910 190 aa11.86□□□□□ -0.51
PDGFB-201ENST00000331163 A0A096LNJ9 63 aa11.86□□□□□ -0.51
PDGFB-201ENST00000331163 DEFB130BP0DP73 79 aa11.86□□□□□ -0.51
PDGFB-201ENST00000331163 DEFB130AP0DP74 79 aa11.86□□□□□ -0.51
PDGFB-201ENST00000331163 MRPL51Q4U2R6 128 aaKnown RBP11.86□□□□□ -0.51
PDGFB-201ENST00000331163 GFRA4Q9GZZ7 299 aa11.86□□□□□ -0.51
PDGFB-201ENST00000331163 GAS8-AS1O95177 125 aa11.85□□□□□ -0.51
PDGFB-201ENST00000331163 OR5A1Q8NGJ0 315 aa11.85□□□□□ -0.51
PDGFB-201ENST00000331163 K7EMT4 169 aa11.85□□□□□ -0.51
PDGFB-201ENST00000331163 CRIP2P52943 208 aaPredicted RBP11.85□□□□□ -0.51
PDGFB-201ENST00000331163 CHAC1Q9BUX1 264 aa11.85□□□□□ -0.51
PDGFB-201ENST00000331163 SPATA3Q8NHX4 192 aa11.84□□□□□ -0.51
PDGFB-201ENST00000331163 ZNF256Q9Y2P7 627 aaPredicted RBP11.84□□□□□ -0.51
PDGFB-201ENST00000331163 ZC2HC1BQ5TFG8 222 aa11.84□□□□□ -0.51
PDGFB-201ENST00000331163 TRGV1A0A0A0MS02 117 aa11.84□□□□□ -0.51
PDGFB-201ENST00000331163 NEGR1Q7Z3B1 354 aa11.84□□□□□ -0.51
PDGFB-201ENST00000331163 NPIPB6E9PJ23 425 aa11.83□□□□□ -0.52
PDGFB-201ENST00000331163 DUSP14O95147 198 aaKnown RBP11.83□□□□□ -0.52
PDGFB-201ENST00000331163 RRN3P1Q2M238 152 aa11.83□□□□□ -0.52
PDGFB-201ENST00000331163 ZNF876PQ49A33 203 aa11.83□□□□□ -0.52
PDGFB-201ENST00000331163 DCANP1Q8TF63 244 aa11.83□□□□□ -0.52
PDGFB-201ENST00000331163 MAP6D1Q9H9H5 199 aa11.83□□□□□ -0.52
PDGFB-201ENST00000331163 TRGV2A0A075B6R0 118 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms