RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 HTN1P15515 57 aa12.4□□□□□ -0.43
DDX41-201ENST00000330503 BEAN1Q3B7T3 259 aa12.4□□□□□ -0.43
DDX41-201ENST00000330503 STHQ8IWL8 128 aa12.4□□□□□ -0.43
DDX41-201ENST00000330503 CRYGDP07320 174 aa12.39□□□□□ -0.43
DDX41-201ENST00000330503 SMIM17P0DL12 118 aa12.39□□□□□ -0.43
DDX41-201ENST00000330503 LINC00482Q8N8I6 264 aa12.39□□□□□ -0.43
DDX41-201ENST00000330503 SYT8Q8NBV8 401 aa12.39□□□□□ -0.43
DDX41-201ENST00000330503 C20orf78Q9BR46 151 aa12.39□□□□□ -0.43
DDX41-201ENST00000330503 SPATA45Q537H7 98 aa12.38□□□□□ -0.43
DDX41-201ENST00000330503 LINC00467Q9BRT7 94 aa12.38□□□□□ -0.43
DDX41-201ENST00000330503 C19orf73Q9NVV2 129 aa12.38□□□□□ -0.43
DDX41-201ENST00000330503 H0Y8G0 127 aa12.38□□□□□ -0.43
DDX41-201ENST00000330503 TCAPO15273 167 aa12.38□□□□□ -0.43
DDX41-201ENST00000330503 SUMO2P61956 95 aaKnown RBP12.38□□□□□ -0.43
DDX41-201ENST00000330503 LINC01545Q5VT33 79 aa12.38□□□□□ -0.43
DDX41-201ENST00000330503 SUMO4Q6EEV6 95 aa12.38□□□□□ -0.43
DDX41-201ENST00000330503 SMIM2Q9BVW6 85 aa12.38□□□□□ -0.43
DDX41-201ENST00000330503 XCL2Q9UBD3 114 aa12.38□□□□□ -0.43
DDX41-201ENST00000330503 TRAV9-2A0A087WT02 112 aa12.37□□□□□ -0.43
DDX41-201ENST00000330503 CMC4P56277 68 aaPredicted RBP12.37□□□□□ -0.43
DDX41-201ENST00000330503 ZNF876PQ49A33 203 aa12.37□□□□□ -0.43
DDX41-201ENST00000330503 TMEM158Q8WZ71 300 aa12.37□□□□□ -0.43
DDX41-201ENST00000330503 LINC01587Q99440 93 aa12.37□□□□□ -0.43
DDX41-201ENST00000330503 INSP01308 110 aa12.37□□□□□ -0.43
DDX41-201ENST00000330503 LAGE3Q14657 143 aa12.37□□□□□ -0.43
DDX41-201ENST00000330503 C14orf144Q96I85 54 aa12.37□□□□□ -0.43
DDX41-201ENST00000330503 PF4P02776 101 aa12.36□□□□□ -0.43
DDX41-201ENST00000330503 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.36□□□□□ -0.43
DDX41-201ENST00000330503 IFI27L1Q96BM0 104 aa12.36□□□□□ -0.43
DDX41-201ENST00000330503 PMCHL2Q9BQD1 86 aa12.36□□□□□ -0.43
DDX41-201ENST00000330503 NDUFAF3Q9BU61 184 aa12.36□□□□□ -0.43
DDX41-201ENST00000330503 C20orf202A1L168 122 aa12.35□□□□□ -0.43
DDX41-201ENST00000330503 C1orf158Q8N1D5 194 aa12.35□□□□□ -0.43
DDX41-201ENST00000330503 FAM110AQ9BQ89 295 aa12.35□□□□□ -0.43
DDX41-201ENST00000330503 WFDC10AQ9H1F0 79 aa12.35□□□□□ -0.43
DDX41-201ENST00000330503 DEFA6Q01524 100 aa12.35□□□□□ -0.43
DDX41-201ENST00000330503 ZNF705AQ6ZN79 300 aaPredicted RBP12.35□□□□□ -0.43
DDX41-201ENST00000330503 C11orf72Q8NBR9 251 aa12.35□□□□□ -0.43
DDX41-201ENST00000330503 MIEN1Q9BRT3 115 aa12.35□□□□□ -0.43
DDX41-201ENST00000330503 FLNBO75369 2602 aaKnown RBP12.35□□□□□ -0.43
DDX41-201ENST00000330503 F5H697 171 aa12.34□□□□□ -0.43
DDX41-201ENST00000330503 PPP1R17O96001 155 aa12.34□□□□□ -0.43
DDX41-201ENST00000330503 FAM74A4Q5TZK3 123 aa12.34□□□□□ -0.43
DDX41-201ENST00000330503 SPATA3Q8NHX4 192 aa12.34□□□□□ -0.43
DDX41-201ENST00000330503 GIG44P09565 113 aaPredicted RBP12.34□□□□□ -0.43
DDX41-201ENST00000330503 IGLL1P15814 213 aa12.34□□□□□ -0.43
DDX41-201ENST00000330503 C18orf15Q96N68 181 aa12.34□□□□□ -0.43
DDX41-201ENST00000330503 AZU1P20160 251 aa12.33□□□□□ -0.44
DDX41-201ENST00000330503 CSTL1Q9H114 145 aa12.33□□□□□ -0.44
DDX41-201ENST00000330503 IGLC3P0DOY3 106 aa12.32□□□□□ -0.44
DDX41-201ENST00000330503 ZNF415Q09FC8 603 aa12.32□□□□□ -0.44
DDX41-201ENST00000330503 MORN3Q6PF18 240 aaPredicted RBP12.32□□□□□ -0.44
DDX41-201ENST00000330503 PTH2Q96A98 100 aa12.32□□□□□ -0.44
DDX41-201ENST00000330503 hDV102S1A0JD36 115 aa12.32□□□□□ -0.44
DDX41-201ENST00000330503 M0QY20 66 aa12.32□□□□□ -0.44
DDX41-201ENST00000330503 M0R2P5 195 aa12.32□□□□□ -0.44
DDX41-201ENST00000330503 POLR2KP53803 58 aaKnown RBP12.32□□□□□ -0.44
DDX41-201ENST00000330503 RPL32P62910 135 aaKnown RBP12.32□□□□□ -0.44
DDX41-201ENST00000330503 ST20Q9HBF5 79 aa12.32□□□□□ -0.44
DDX41-201ENST00000330503 LGALS9BQ3B8N2 356 aa12.31□□□□□ -0.44
DDX41-201ENST00000330503 LGALS9CQ6DKI2 356 aa12.31□□□□□ -0.44
DDX41-201ENST00000330503 NEGR1Q7Z3B1 354 aa12.31□□□□□ -0.44
DDX41-201ENST00000330503 JMJD1CQ15652 2540 aa12.31□□□□□ -0.44
DDX41-201ENST00000330503 NUTF2P61970 127 aaKnown RBP12.31□□□□□ -0.44
DDX41-201ENST00000330503 CITED1Q99966 193 aa12.31□□□□□ -0.44
DDX41-201ENST00000330503 TENM1Q9UKZ4 2725 aa12.3□□□□□ -0.44
DDX41-201ENST00000330503 TRBV6-5A0A0K0K1A5 114 aa12.3□□□□□ -0.44
DDX41-201ENST00000330503 NUDT3O95989 172 aa12.3□□□□□ -0.44
DDX41-201ENST00000330503 ZNF56Q15929 161 aa12.3□□□□□ -0.44
DDX41-201ENST00000330503 PIK3CD-AS1Q5SR53 167 aa12.3□□□□□ -0.44
DDX41-201ENST00000330503 UFSP1Q6NVU6 142 aa12.3□□□□□ -0.44
DDX41-201ENST00000330503 K7EMI3 77 aa12.29□□□□□ -0.44
DDX41-201ENST00000330503 ORMDL2Q53FV1 153 aa12.29□□□□□ -0.44
DDX41-201ENST00000330503 F8P00451 2351 aa12.29□□□□□ -0.44
DDX41-201ENST00000330503 IGHV3OR16-12A0A075B7B8 117 aa12.29□□□□□ -0.44
DDX41-201ENST00000330503 RPL35AP18077 110 aaKnown RBP12.29□□□□□ -0.44
DDX41-201ENST00000330503 SPXQ9BT56 116 aa12.29□□□□□ -0.44
DDX41-201ENST00000330503 TMEM208Q9BTX3 173 aa12.29□□□□□ -0.44
DDX41-201ENST00000330503 GOLT1BQ9Y3E0 138 aa12.28□□□□□ -0.44
DDX41-201ENST00000330503 CTAG1AP78358 180 aa12.28□□□□□ -0.44
DDX41-201ENST00000330503 TOMM6Q96B49 74 aa12.28□□□□□ -0.44
DDX41-201ENST00000330503 DKK2Q9UBU2 259 aa12.28□□□□□ -0.44
DDX41-201ENST00000330503 IGHV3-73A0A0B4J1V6 119 aa12.27□□□□□ -0.45
DDX41-201ENST00000330503 SDHAF1A6NFY7 115 aa12.27□□□□□ -0.45
DDX41-201ENST00000330503 VCYO14598 125 aa12.27□□□□□ -0.45
DDX41-201ENST00000330503 ATP5LO75964 103 aa12.27□□□□□ -0.45
DDX41-201ENST00000330503 UQCR10Q9UDW1 63 aa12.27□□□□□ -0.45
DDX41-201ENST00000330503 VWFP04275 2813 aa12.27□□□□□ -0.45
DDX41-201ENST00000330503 A8MWV9 139 aa12.26□□□□□ -0.45
DDX41-201ENST00000330503 CFAP126Q5VTH2 177 aa12.26□□□□□ -0.45
DDX41-201ENST00000330503 IL17DQ8TAD2 202 aa12.26□□□□□ -0.45
DDX41-201ENST00000330503 MRPL16Q9NX20 251 aaKnown RBP12.26□□□□□ -0.45
DDX41-201ENST00000330503 PRSS1P07477 247 aa12.26□□□□□ -0.45
DDX41-201ENST00000330503 ODF1Q14990 250 aa12.26□□□□□ -0.45
DDX41-201ENST00000330503 Q6ZSN1 163 aa12.26□□□□□ -0.45
DDX41-201ENST00000330503 DEFB104AQ8WTQ1 72 aa12.26□□□□□ -0.45
DDX41-201ENST00000330503 NACAE9PAV3 2078 aa12.25□□□□□ -0.45
DDX41-201ENST00000330503 TRBV27A0A0K0K1C4 114 aa12.25□□□□□ -0.45
DDX41-201ENST00000330503 CSNK1G2-AS1Q8NCQ2 148 aa12.25□□□□□ -0.45
DDX41-201ENST00000330503 RNASE8Q8TDE3 154 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms