RNA–Protein interactions for RNA: ENST00000328839.3

PPP4R4-202, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

TSL 1 (best) BASIC

Gene PPP4R4, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-202ENST00000328839 KRBOX1C9JBD0 128 aa16.49■□□□□ 0.23
PPP4R4-202ENST00000328839 DNAJC30Q96LL9 226 aa16.49■□□□□ 0.23
PPP4R4-202ENST00000328839 KLK12Q9UKR0 248 aa16.49■□□□□ 0.23
PPP4R4-202ENST00000328839 SEC11BP0C7V7 166 aa16.48■□□□□ 0.23
PPP4R4-202ENST00000328839 NIT1Q86X76 327 aa16.48■□□□□ 0.23
PPP4R4-202ENST00000328839 PHLDA3Q9Y5J5 127 aa16.48■□□□□ 0.23
PPP4R4-202ENST00000328839 FAM74A7A6NL05 159 aa16.47■□□□□ 0.23
PPP4R4-202ENST00000328839 M0R381 172 aa16.47■□□□□ 0.23
PPP4R4-202ENST00000328839 SH2D1AO60880 128 aa16.47■□□□□ 0.23
PPP4R4-202ENST00000328839 CRIP1P50238 77 aa16.47■□□□□ 0.23
PPP4R4-202ENST00000328839 Q8N976 141 aa16.47■□□□□ 0.23
PPP4R4-202ENST00000328839 HIST1H2BAQ96A08 127 aa16.47■□□□□ 0.23
PPP4R4-202ENST00000328839 A0A087WX48 190 aa16.46■□□□□ 0.23
PPP4R4-202ENST00000328839 FXYD6-FXYD2A0A087WZ82 144 aa16.46■□□□□ 0.23
PPP4R4-202ENST00000328839 TMSB15BA0A087X1C1 80 aa16.46■□□□□ 0.23
PPP4R4-202ENST00000328839 TPT1P13693 172 aaKnown RBP16.46■□□□□ 0.23
PPP4R4-202ENST00000328839 DNLZQ5SXM8 178 aa16.46■□□□□ 0.23
PPP4R4-202ENST00000328839 FAM162BQ5T6X4 162 aa16.46■□□□□ 0.23
PPP4R4-202ENST00000328839 KCNIP4Q6PIL6 250 aa16.46■□□□□ 0.23
PPP4R4-202ENST00000328839 SCXQ7RTU7 201 aa16.46■□□□□ 0.23
PPP4R4-202ENST00000328839 DEFB104AQ8WTQ1 72 aa16.46■□□□□ 0.23
PPP4R4-202ENST00000328839 UBE2WQ96B02 151 aa16.46■□□□□ 0.23
PPP4R4-202ENST00000328839 NKX6-2Q9C056 277 aaPredicted RBP16.46■□□□□ 0.23
PPP4R4-202ENST00000328839 RNF222A6NCQ9 220 aa16.45■□□□□ 0.22
PPP4R4-202ENST00000328839 UBE2G1P62253 170 aa16.45■□□□□ 0.22
PPP4R4-202ENST00000328839 AKR1C8PQ5T2L2 129 aa16.45■□□□□ 0.22
PPP4R4-202ENST00000328839 SFRP2Q96HF1 295 aa16.45■□□□□ 0.22
PPP4R4-202ENST00000328839 ZFP30Q9Y2G7 519 aa16.45■□□□□ 0.22
PPP4R4-202ENST00000328839 GIPP09681 153 aaPredicted RBP16.44■□□□□ 0.22
PPP4R4-202ENST00000328839 PTTG1O95997 202 aa16.43■□□□□ 0.22
PPP4R4-202ENST00000328839 FMC1Q96HJ9 113 aa16.43■□□□□ 0.22
PPP4R4-202ENST00000328839 RPL36AP83881 106 aaKnown RBP16.42■□□□□ 0.22
PPP4R4-202ENST00000328839 ELOBQ15370 118 aa16.42■□□□□ 0.22
PPP4R4-202ENST00000328839 RPL36ALQ969Q0 106 aaKnown RBP16.42■□□□□ 0.22
PPP4R4-202ENST00000328839 MAP1LC3B2A6NCE7 125 aa16.41■□□□□ 0.22
PPP4R4-202ENST00000328839 KRTAP29-1A8MX34 341 aaPredicted RBP16.41■□□□□ 0.22
PPP4R4-202ENST00000328839 ZFP82Q8N141 532 aa16.41■□□□□ 0.22
PPP4R4-202ENST00000328839 MAP1LC3BQ9GZQ8 125 aa16.41■□□□□ 0.22
PPP4R4-202ENST00000328839 LINC01559Q495D7 138 aa16.4■□□□□ 0.22
PPP4R4-202ENST00000328839 CHCHD7Q9BUK0 85 aa16.4■□□□□ 0.22
PPP4R4-202ENST00000328839 TRBV10-1A0A0K0K1A3 114 aa16.39■□□□□ 0.21
PPP4R4-202ENST00000328839 TMEM262E9PQX1 116 aa16.39■□□□□ 0.21
PPP4R4-202ENST00000328839 ZNF674Q2M3X9 581 aa16.39■□□□□ 0.21
PPP4R4-202ENST00000328839 CST9LP1Q5W188 147 aa16.39■□□□□ 0.21
PPP4R4-202ENST00000328839 COX8CQ7Z4L0 72 aa16.39■□□□□ 0.21
PPP4R4-202ENST00000328839 CHAC1Q9BUX1 264 aa16.39■□□□□ 0.21
PPP4R4-202ENST00000328839 TRBV7-3A0A075B6L6 115 aa16.38■□□□□ 0.21
PPP4R4-202ENST00000328839 UBE2D3P61077 147 aa16.38■□□□□ 0.21
PPP4R4-202ENST00000328839 UBE2D2P62837 147 aa16.38■□□□□ 0.21
PPP4R4-202ENST00000328839 AKR1C3P42330 323 aa16.37■□□□□ 0.21
PPP4R4-202ENST00000328839 Q0VG73 95 aa16.37■□□□□ 0.21
PPP4R4-202ENST00000328839 C1orf43Q9BWL3 253 aa16.37■□□□□ 0.21
PPP4R4-202ENST00000328839 LTAP01374 205 aa16.36■□□□□ 0.21
PPP4R4-202ENST00000328839 STOML3Q8TAV4 291 aa16.36■□□□□ 0.21
PPP4R4-202ENST00000328839 CRPP02741 224 aa16.35■□□□□ 0.21
PPP4R4-202ENST00000328839 ZNF56Q15929 161 aa16.35■□□□□ 0.21
PPP4R4-202ENST00000328839 ATRAIDQ6UW56 229 aa16.35■□□□□ 0.21
PPP4R4-202ENST00000328839 CIRBP-AS1Q8TBR5 109 aa16.35■□□□□ 0.21
PPP4R4-202ENST00000328839 C14orf177Q52M58 125 aa16.34■□□□□ 0.21
PPP4R4-202ENST00000328839 C15orf54Q8N8G6 183 aa16.34■□□□□ 0.21
PPP4R4-202ENST00000328839 TRBV6-1A0A0K0K1D8 114 aa16.33■□□□□ 0.2
PPP4R4-202ENST00000328839 TCEAL7Q9BRU2 100 aa16.33■□□□□ 0.2
PPP4R4-202ENST00000328839 TRBV6-8A0A0A6YYG3 113 aa16.32■□□□□ 0.2
PPP4R4-202ENST00000328839 FHITP49789 147 aa16.32■□□□□ 0.2
PPP4R4-202ENST00000328839 RAB4BP61018 213 aa16.32■□□□□ 0.2
PPP4R4-202ENST00000328839 ARPC5O15511 151 aa16.31■□□□□ 0.2
PPP4R4-202ENST00000328839 ANGP03950 147 aaKnown RBP16.31■□□□□ 0.2
PPP4R4-202ENST00000328839 RPL19P84098 196 aaKnown RBP16.31■□□□□ 0.2
PPP4R4-202ENST00000328839 MPV17L2Q567V2 206 aa16.31■□□□□ 0.2
PPP4R4-202ENST00000328839 ENHOQ6UWT2 76 aa16.31■□□□□ 0.2
PPP4R4-202ENST00000328839 NEXN-AS1Q8NBZ9 246 aa16.31■□□□□ 0.2
PPP4R4-202ENST00000328839 OR10G8Q8NGN5 311 aa16.31■□□□□ 0.2
PPP4R4-202ENST00000328839 PAGE4O60829 102 aa16.3■□□□□ 0.2
PPP4R4-202ENST00000328839 HLA-DQA1P01909 254 aa16.3■□□□□ 0.2
PPP4R4-202ENST00000328839 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.3■□□□□ 0.2
PPP4R4-202ENST00000328839 OR10AG1Q8NH19 301 aa16.3■□□□□ 0.2
PPP4R4-202ENST00000328839 CHCHD5Q9BSY4 110 aa16.3■□□□□ 0.2
PPP4R4-202ENST00000328839 KRTAP10-4P60372 401 aaPredicted RBP16.29■□□□□ 0.2
PPP4R4-202ENST00000328839 ZNF471Q9BX82 626 aaPredicted RBP16.29■□□□□ 0.2
PPP4R4-202ENST00000328839 CYTL1Q9NRR1 136 aa16.29■□□□□ 0.2
PPP4R4-202ENST00000328839 MUC21A0A0G2JKD1 596 aa16.28■□□□□ 0.2
PPP4R4-202ENST00000328839 MUC21A0A140T8X8 626 aa16.28■□□□□ 0.2
PPP4R4-202ENST00000328839 A0A1B0GV50 99 aa16.27■□□□□ 0.2
PPP4R4-202ENST00000328839 F5H697 171 aa16.27■□□□□ 0.2
PPP4R4-202ENST00000328839 IGLV2-8P01709 118 aa16.27■□□□□ 0.2
PPP4R4-202ENST00000328839 SSTP61278 116 aa16.27■□□□□ 0.2
PPP4R4-202ENST00000328839 BATF3Q9NR55 127 aa16.27■□□□□ 0.2
PPP4R4-202ENST00000328839 USP17L23D6RBM5 183 aa16.26■□□□□ 0.19
PPP4R4-202ENST00000328839 G3V3Q6 166 aa16.26■□□□□ 0.19
PPP4R4-202ENST00000328839 SPANXN1Q5VSR9 72 aa16.26■□□□□ 0.19
PPP4R4-202ENST00000328839 SCO2A0A1W2PP80 73 aa16.25■□□□□ 0.19
PPP4R4-202ENST00000328839 PRR27Q6MZM9 219 aa16.25■□□□□ 0.19
PPP4R4-202ENST00000328839 S100A9P06702 114 aaKnown RBP16.24■□□□□ 0.19
PPP4R4-202ENST00000328839 PKIAP61925 76 aa16.24■□□□□ 0.19
PPP4R4-202ENST00000328839 SERTAD4-AS1Q5TG53 156 aa16.24■□□□□ 0.19
PPP4R4-202ENST00000328839 CLPSL2Q6UWE3 100 aa16.24■□□□□ 0.19
PPP4R4-202ENST00000328839 SFT2D1Q8WV19 159 aa16.24■□□□□ 0.19
PPP4R4-202ENST00000328839 LRP1Q07954 4544 aaKnown RBP16.24■□□□□ 0.19
PPP4R4-202ENST00000328839 PFDN1O60925 122 aa16.23■□□□□ 0.19
PPP4R4-202ENST00000328839 OXTP01178 125 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms