RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 LGALS9O00182 355 aa9.6□□□□□ -0.87
CCDC60-201ENST00000327554 ECSCRQ19T08 205 aa9.6□□□□□ -0.87
CCDC60-201ENST00000327554 UBE2WQ96B02 151 aa9.6□□□□□ -0.87
CCDC60-201ENST00000327554 ABCA4P78363 2273 aa9.6□□□□□ -0.87
CCDC60-201ENST00000327554 LEPROTO15243 131 aa9.6□□□□□ -0.87
CCDC60-201ENST00000327554 NXPH4O95158 308 aa9.6□□□□□ -0.87
CCDC60-201ENST00000327554 VMO1Q7Z5L0 202 aa9.6□□□□□ -0.87
CCDC60-201ENST00000327554 LINC00477Q96M19 166 aa9.6□□□□□ -0.87
CCDC60-201ENST00000327554 PIEZO2Q9H5I5 2752 aa9.6□□□□□ -0.87
CCDC60-201ENST00000327554 TMEM223A0PJW6 202 aa9.59□□□□□ -0.87
CCDC60-201ENST00000327554 M0R1W7 72 aa9.59□□□□□ -0.87
CCDC60-201ENST00000327554 BRI3O95415 125 aa9.59□□□□□ -0.87
CCDC60-201ENST00000327554 DEFB1P60022 68 aa9.59□□□□□ -0.87
CCDC60-201ENST00000327554 Q1RN00 199 aa9.59□□□□□ -0.87
CCDC60-201ENST00000327554 C9orf139Q6ZV77 190 aa9.59□□□□□ -0.87
CCDC60-201ENST00000327554 LAMA5O15230 3695 aa9.59□□□□□ -0.87
CCDC60-201ENST00000327554 TRBV30A0A0K0K1B3 111 aa9.59□□□□□ -0.87
CCDC60-201ENST00000327554 TRIAP1O43715 76 aa9.59□□□□□ -0.87
CCDC60-201ENST00000327554 PRO3102Q9H379 93 aa9.59□□□□□ -0.87
CCDC60-201ENST00000327554 MGAQ8IWI9 3026 aa9.59□□□□□ -0.87
CCDC60-201ENST00000327554 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.58□□□□□ -0.88
CCDC60-201ENST00000327554 ATP6V0E1O15342 81 aa9.58□□□□□ -0.88
CCDC60-201ENST00000327554 MEIG1Q5JSS6 88 aa9.58□□□□□ -0.88
CCDC60-201ENST00000327554 SUMO4Q6EEV6 95 aa9.58□□□□□ -0.88
CCDC60-201ENST00000327554 SPANXA1Q9NS26 97 aa9.58□□□□□ -0.88
CCDC60-201ENST00000327554 APC2O95996 2303 aa9.58□□□□□ -0.88
CCDC60-201ENST00000327554 VCYO14598 125 aa9.58□□□□□ -0.88
CCDC60-201ENST00000327554 MRPL23Q16540 153 aaKnown RBP9.58□□□□□ -0.88
CCDC60-201ENST00000327554 TMEM95Q3KNT9 176 aa9.58□□□□□ -0.88
CCDC60-201ENST00000327554 C1orf122Q6ZSJ8 110 aa9.58□□□□□ -0.88
CCDC60-201ENST00000327554 FAM19A4Q96LR4 140 aa9.58□□□□□ -0.88
CCDC60-201ENST00000327554 BEX4Q9NWD9 120 aaPredicted RBP9.58□□□□□ -0.88
CCDC60-201ENST00000327554 M0R2P5 195 aa9.57□□□□□ -0.88
CCDC60-201ENST00000327554 JPT2Q9H910 190 aa9.57□□□□□ -0.88
CCDC60-201ENST00000327554 TNFRSF18Q9Y5U5 241 aa9.57□□□□□ -0.88
CCDC60-201ENST00000327554 RNASE4P34096 147 aaKnown RBP9.57□□□□□ -0.88
CCDC60-201ENST00000327554 FOXC1Q12948 553 aa9.57□□□□□ -0.88
CCDC60-201ENST00000327554 OPRPNQ99935 248 aaPredicted RBP9.57□□□□□ -0.88
CCDC60-201ENST00000327554 LRBAP50851 2863 aa9.57□□□□□ -0.88
CCDC60-201ENST00000327554 A0A0J9YX75 114 aa9.56□□□□□ -0.88
CCDC60-201ENST00000327554 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.56□□□□□ -0.88
CCDC60-201ENST00000327554 SDHAF1A6NFY7 115 aa9.56□□□□□ -0.88
CCDC60-201ENST00000327554 OOSP1A8MZH6 123 aa9.56□□□□□ -0.88
CCDC60-201ENST00000327554 G3V318 75 aa9.56□□□□□ -0.88
CCDC60-201ENST00000327554 H7C423 109 aa9.56□□□□□ -0.88
CCDC60-201ENST00000327554 LY6HO94772 140 aa9.56□□□□□ -0.88
CCDC60-201ENST00000327554 C2orf82Q6UX34 121 aa9.56□□□□□ -0.88
CCDC60-201ENST00000327554 APRG1Q8IVJ8 170 aa9.56□□□□□ -0.88
CCDC60-201ENST00000327554 EEF1AKMT3Q96AZ1 226 aa9.56□□□□□ -0.88
CCDC60-201ENST00000327554 IGHV3-64A0A075B6Q5 118 aa9.56□□□□□ -0.88
CCDC60-201ENST00000327554 TRBV27A0A0K0K1C4 114 aa9.56□□□□□ -0.88
CCDC60-201ENST00000327554 CD3EP07766 207 aa9.56□□□□□ -0.88
CCDC60-201ENST00000327554 ZNF22P17026 224 aaPredicted RBP9.56□□□□□ -0.88
CCDC60-201ENST00000327554 BSNQ9UPA5 3926 aa9.55□□□□□ -0.88
CCDC60-201ENST00000327554 A0A0J9YXY3 114 aa9.55□□□□□ -0.88
CCDC60-201ENST00000327554 SOCS3O14543 225 aa9.55□□□□□ -0.88
CCDC60-201ENST00000327554 OVOL1O14753 267 aa9.55□□□□□ -0.88
CCDC60-201ENST00000327554 ZNF580Q9UK33 172 aa9.55□□□□□ -0.88
CCDC60-201ENST00000327554 TRBV7-1A0A0A6YYK4 115 aa9.55□□□□□ -0.88
CCDC60-201ENST00000327554 IGHV1-69P01742 117 aa9.55□□□□□ -0.88
CCDC60-201ENST00000327554 H3BT86 120 aa9.54□□□□□ -0.88
CCDC60-201ENST00000327554 LINC01587Q99440 93 aa9.54□□□□□ -0.88
CCDC60-201ENST00000327554 LITAFQ99732 161 aa9.54□□□□□ -0.88
CCDC60-201ENST00000327554 CHCHD5Q9BSY4 110 aa9.54□□□□□ -0.88
CCDC60-201ENST00000327554 MAP1BP46821 2468 aaKnown RBP9.54□□□□□ -0.88
CCDC60-201ENST00000327554 CACNA1BQ00975 2339 aa9.54□□□□□ -0.88
CCDC60-201ENST00000327554 A0A087WWL8 130 aa9.54□□□□□ -0.88
CCDC60-201ENST00000327554 FAM240AA0A1B0GVK7 77 aa9.54□□□□□ -0.88
CCDC60-201ENST00000327554 DEFB121Q5J5C9 76 aa9.54□□□□□ -0.88
CCDC60-201ENST00000327554 MINOS1Q5TGZ0 78 aa9.54□□□□□ -0.88
CCDC60-201ENST00000327554 MINOS1-NBL1R4GNA1 71 aa9.54□□□□□ -0.88
CCDC60-201ENST00000327554 TRBV6-5A0A0K0K1A5 114 aa9.53□□□□□ -0.88
CCDC60-201ENST00000327554 TRBV7-7A0A0K0K1E9 115 aa9.53□□□□□ -0.88
CCDC60-201ENST00000327554 F6UB75 175 aa9.53□□□□□ -0.88
CCDC60-201ENST00000327554 ZNF56Q15929 161 aa9.53□□□□□ -0.88
CCDC60-201ENST00000327554 ICOSQ9Y6W8 199 aa9.53□□□□□ -0.88
CCDC60-201ENST00000327554 UBE2E1P51965 193 aa9.53□□□□□ -0.88
CCDC60-201ENST00000327554 DEFB124Q8NES8 71 aa9.53□□□□□ -0.88
CCDC60-201ENST00000327554 NSUN5P1Q3KNT7 163 aa9.52□□□□□ -0.89
CCDC60-201ENST00000327554 DUX3Q96PT4 197 aa9.52□□□□□ -0.89
CCDC60-201ENST00000327554 PRRC2AP48634 2157 aaKnown RBP9.52□□□□□ -0.89
CCDC60-201ENST00000327554 A0A0J9YXV3 536 aa9.51□□□□□ -0.89
CCDC60-201ENST00000327554 F5H697 171 aa9.51□□□□□ -0.89
CCDC60-201ENST00000327554 C3orf56Q8N813 242 aa9.51□□□□□ -0.89
CCDC60-201ENST00000327554 ZNF256Q9Y2P7 627 aaPredicted RBP9.51□□□□□ -0.89
CCDC60-201ENST00000327554 VPREB3Q9UKI3 123 aa9.51□□□□□ -0.89
CCDC60-201ENST00000327554 ADARB2-AS1A8MUL3 147 aa9.5□□□□□ -0.89
CCDC60-201ENST00000327554 UNQ9165/PRO28630Q6UXU0 137 aa9.5□□□□□ -0.89
CCDC60-201ENST00000327554 CLEC2BQ92478 149 aa9.5□□□□□ -0.89
CCDC60-201ENST00000327554 TMEM126AQ9H061 195 aa9.5□□□□□ -0.89
CCDC60-201ENST00000327554 RHOHQ15669 191 aa9.5□□□□□ -0.89
CCDC60-201ENST00000327554 IGHV3-30-3P0DP02 117 aa9.49□□□□□ -0.89
CCDC60-201ENST00000327554 ADAMTSL4-AS1Q5T5F5 129 aa9.49□□□□□ -0.89
CCDC60-201ENST00000327554 Q6ZSV7 163 aa9.49□□□□□ -0.89
CCDC60-201ENST00000327554 LST1O00453 97 aa9.49□□□□□ -0.89
CCDC60-201ENST00000327554 ATMQ13315 3056 aa9.49□□□□□ -0.89
CCDC60-201ENST00000327554 SPTBN2O15020 2390 aa9.49□□□□□ -0.89
CCDC60-201ENST00000327554 IGLV4-3A0A075B6K6 122 aa9.48□□□□□ -0.89
CCDC60-201ENST00000327554 IGF2-ASQ6U949 168 aa9.48□□□□□ -0.89
CCDC60-201ENST00000327554 C20orf203Q8NBC4 194 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms