RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 FRZBQ92765 325 aa7.32□□□□□ -1.24
VIPAS39-201ENST00000327028 JPT2Q9H910 190 aa7.32□□□□□ -1.24
VIPAS39-201ENST00000327028 KIF25-AS1Q9Y6Z4 181 aa7.32□□□□□ -1.24
VIPAS39-201ENST00000327028 RS1O15537 224 aa7.32□□□□□ -1.24
VIPAS39-201ENST00000327028 SMIM17P0DL12 118 aa7.32□□□□□ -1.24
VIPAS39-201ENST00000327028 FABP9Q0Z7S8 132 aa7.32□□□□□ -1.24
VIPAS39-201ENST00000327028 AMN1Q8IY45 258 aa7.32□□□□□ -1.24
VIPAS39-201ENST00000327028 LINC00612Q8N6U2 182 aa7.32□□□□□ -1.24
VIPAS39-201ENST00000327028 C14orf178Q8N769 122 aaPredicted RBP7.32□□□□□ -1.24
VIPAS39-201ENST00000327028 B9D2Q9BPU9 175 aa7.32□□□□□ -1.24
VIPAS39-201ENST00000327028 C11orf68Q9H3H3 251 aaKnown RBP7.32□□□□□ -1.24
VIPAS39-201ENST00000327028 MEGF8Q7Z7M0 2845 aa7.32□□□□□ -1.24
VIPAS39-201ENST00000327028 PHOX2AO14813 284 aa7.31□□□□□ -1.24
VIPAS39-201ENST00000327028 TRGC2P03986 189 aa7.31□□□□□ -1.24
VIPAS39-201ENST00000327028 CFAP126Q5VTH2 177 aa7.31□□□□□ -1.24
VIPAS39-201ENST00000327028 RNF185Q96GF1 192 aa7.31□□□□□ -1.24
VIPAS39-201ENST00000327028 TENM3Q9P273 2699 aa7.31□□□□□ -1.24
VIPAS39-201ENST00000327028 A0A087WWL8 130 aa7.31□□□□□ -1.24
VIPAS39-201ENST00000327028 DEFB4AO15263 64 aa7.31□□□□□ -1.24
VIPAS39-201ENST00000327028 CRYGDP07320 174 aa7.31□□□□□ -1.24
VIPAS39-201ENST00000327028 POM121L12Q8N7R1 296 aa7.31□□□□□ -1.24
VIPAS39-201ENST00000327028 SAMD10Q9BYL1 202 aa7.31□□□□□ -1.24
VIPAS39-201ENST00000327028 NACAE9PAV3 2078 aa7.31□□□□□ -1.24
VIPAS39-201ENST00000327028 TRAV4A0A0B4J268 109 aa7.31□□□□□ -1.24
VIPAS39-201ENST00000327028 TEX48A0A1B0GUV7 120 aa7.31□□□□□ -1.24
VIPAS39-201ENST00000327028 GAGE12BA1L429 117 aa7.31□□□□□ -1.24
VIPAS39-201ENST00000327028 RHODO00212 210 aa7.31□□□□□ -1.24
VIPAS39-201ENST00000327028 GAGE7O76087 117 aa7.31□□□□□ -1.24
VIPAS39-201ENST00000327028 GAGE12FP0CL80 117 aa7.31□□□□□ -1.24
VIPAS39-201ENST00000327028 GAGE12GP0CL81 117 aa7.31□□□□□ -1.24
VIPAS39-201ENST00000327028 GAGE12IP0CL82 117 aa7.31□□□□□ -1.24
VIPAS39-201ENST00000327028 LINC00315P59091 139 aa7.31□□□□□ -1.24
VIPAS39-201ENST00000327028 MRPL51Q4U2R6 128 aaKnown RBP7.31□□□□□ -1.24
VIPAS39-201ENST00000327028 FAM222AQ5U5X8 452 aa7.31□□□□□ -1.24
VIPAS39-201ENST00000327028 UFSP1Q6NVU6 142 aa7.31□□□□□ -1.24
VIPAS39-201ENST00000327028 DKK2Q9UBU2 259 aa7.31□□□□□ -1.24
VIPAS39-201ENST00000327028 MGPP08493 103 aa7.3□□□□□ -1.24
VIPAS39-201ENST00000327028 RAB4AP20338 218 aa7.3□□□□□ -1.24
VIPAS39-201ENST00000327028 DEFA6Q01524 100 aa7.3□□□□□ -1.24
VIPAS39-201ENST00000327028 C18orf15Q96N68 181 aa7.3□□□□□ -1.24
VIPAS39-201ENST00000327028 FAM74A4Q5TZK3 123 aa7.3□□□□□ -1.24
VIPAS39-201ENST00000327028 ZFP2Q6ZN57 461 aa7.3□□□□□ -1.24
VIPAS39-201ENST00000327028 ZMAT4Q9H898 229 aa7.3□□□□□ -1.24
VIPAS39-201ENST00000327028 TRGV2A0A075B6R0 118 aa7.29□□□□□ -1.24
VIPAS39-201ENST00000327028 C1orf196B1AJZ1 125 aa7.29□□□□□ -1.24
VIPAS39-201ENST00000327028 SPART-AS1P0CW21 52 aa7.29□□□□□ -1.24
VIPAS39-201ENST00000327028 OR4C5Q8NGB2 326 aa7.29□□□□□ -1.24
VIPAS39-201ENST00000327028 MRAP2Q96G30 205 aa7.29□□□□□ -1.24
VIPAS39-201ENST00000327028 CELA1Q9UNI1 258 aa7.29□□□□□ -1.24
VIPAS39-201ENST00000327028 U3KQK5 164 aa7.29□□□□□ -1.24
VIPAS39-201ENST00000327028 CIDEAO60543 219 aa7.29□□□□□ -1.24
VIPAS39-201ENST00000327028 ZNF56Q15929 161 aa7.29□□□□□ -1.24
VIPAS39-201ENST00000327028 KIAA1644Q3SXP7 199 aa7.29□□□□□ -1.24
VIPAS39-201ENST00000327028 PPBPP02775 128 aa7.28□□□□□ -1.24
VIPAS39-201ENST00000327028 DEFB130BP0DP73 79 aa7.28□□□□□ -1.24
VIPAS39-201ENST00000327028 DEFB130AP0DP74 79 aa7.28□□□□□ -1.24
VIPAS39-201ENST00000327028 D6R8Y8 96 aa7.28□□□□□ -1.24
VIPAS39-201ENST00000327028 CKS2P33552 79 aa7.28□□□□□ -1.24
VIPAS39-201ENST00000327028 SUMO4Q6EEV6 95 aa7.28□□□□□ -1.24
VIPAS39-201ENST00000327028 ORMDL3Q8N138 153 aa7.28□□□□□ -1.24
VIPAS39-201ENST00000327028 ZNF479Q96JC4 524 aa7.28□□□□□ -1.24
VIPAS39-201ENST00000327028 HUWE1Q7Z6Z7 4374 aaKnown RBP7.28□□□□□ -1.24
VIPAS39-201ENST00000327028 DNAH9Q9NYC9 4486 aa7.28□□□□□ -1.24
VIPAS39-201ENST00000327028 IGHV3-73A0A0B4J1V6 119 aa7.27□□□□□ -1.25
VIPAS39-201ENST00000327028 TRAV26-2A0A0B4J265 109 aa7.27□□□□□ -1.25
VIPAS39-201ENST00000327028 A0A0J9YWU9 116 aa7.27□□□□□ -1.25
VIPAS39-201ENST00000327028 F5H697 171 aa7.27□□□□□ -1.25
VIPAS39-201ENST00000327028 SMKR1H3BMG3 65 aa7.27□□□□□ -1.25
VIPAS39-201ENST00000327028 NCR2O95944 276 aa7.27□□□□□ -1.25
VIPAS39-201ENST00000327028 SRIP30626 198 aa7.27□□□□□ -1.25
VIPAS39-201ENST00000327028 RAB5BP61020 215 aa7.27□□□□□ -1.25
VIPAS39-201ENST00000327028 DAD1P61803 113 aa7.27□□□□□ -1.25
VIPAS39-201ENST00000327028 ALKBH7Q9BT30 221 aaPredicted RBP7.27□□□□□ -1.25
VIPAS39-201ENST00000327028 EDA2RQ9HAV5 297 aa7.27□□□□□ -1.25
VIPAS39-201ENST00000327028 IGHV3-53P01767 116 aa7.27□□□□□ -1.25
VIPAS39-201ENST00000327028 PRELID3AQ96N28 172 aa7.27□□□□□ -1.25
VIPAS39-201ENST00000327028 NHLRC4P0CG21 123 aaPredicted RBP7.26□□□□□ -1.25
VIPAS39-201ENST00000327028 LAMTOR2Q9Y2Q5 125 aa7.26□□□□□ -1.25
VIPAS39-201ENST00000327028 HIST1H2BKO60814 126 aa7.26□□□□□ -1.25
VIPAS39-201ENST00000327028 GAS8-AS1O95177 125 aa7.26□□□□□ -1.25
VIPAS39-201ENST00000327028 HIST1H2BJP06899 126 aa7.26□□□□□ -1.25
VIPAS39-201ENST00000327028 HIST1H2BOP23527 126 aa7.26□□□□□ -1.25
VIPAS39-201ENST00000327028 HIST1H2BBP33778 126 aa7.26□□□□□ -1.25
VIPAS39-201ENST00000327028 HIST1H2BDP58876 126 aa7.26□□□□□ -1.25
VIPAS39-201ENST00000327028 HIST1H2BCP62807 126 aa7.26□□□□□ -1.25
VIPAS39-201ENST00000327028 HIST2H2BEQ16778 126 aa7.26□□□□□ -1.25
VIPAS39-201ENST00000327028 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.26□□□□□ -1.25
VIPAS39-201ENST00000327028 NRACQ8N912 160 aa7.26□□□□□ -1.25
VIPAS39-201ENST00000327028 HIST1H2BHQ93079 126 aa7.26□□□□□ -1.25
VIPAS39-201ENST00000327028 HIST1H2BNQ99877 126 aa7.26□□□□□ -1.25
VIPAS39-201ENST00000327028 HIST1H2BMQ99879 126 aa7.26□□□□□ -1.25
VIPAS39-201ENST00000327028 H7C1H1 209 aa7.25□□□□□ -1.25
VIPAS39-201ENST00000327028 M0QY20 66 aa7.25□□□□□ -1.25
VIPAS39-201ENST00000327028 GATA1P15976 413 aaPredicted RBP7.25□□□□□ -1.25
VIPAS39-201ENST00000327028 PPP1R17O96001 155 aa7.25□□□□□ -1.25
VIPAS39-201ENST00000327028 NPYP01303 97 aa7.25□□□□□ -1.25
VIPAS39-201ENST00000327028 Q6ZSN1 163 aa7.25□□□□□ -1.25
VIPAS39-201ENST00000327028 PRKDCP78527 4128 aaKnown RBP7.25□□□□□ -1.25
VIPAS39-201ENST00000327028 TNFRSF6BO95407 300 aa7.24□□□□□ -1.25
VIPAS39-201ENST00000327028 ATP5G1P05496 136 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms