RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 U3KQE9 123 aa9.73□□□□□ -0.85
HMGCS1-201ENST00000325110 PIFOQ8TCI5 191 aa9.72□□□□□ -0.85
HMGCS1-201ENST00000325110 TSSC4Q9Y5U2 329 aaPredicted RBP9.72□□□□□ -0.85
HMGCS1-201ENST00000325110 G3V4G9 280 aa9.72□□□□□ -0.85
HMGCS1-201ENST00000325110 IGHV4-59P01825 116 aa9.72□□□□□ -0.85
HMGCS1-201ENST00000325110 Q1RN00 199 aa9.72□□□□□ -0.85
HMGCS1-201ENST00000325110 PLEKHB2Q96CS7 222 aa9.72□□□□□ -0.85
HMGCS1-201ENST00000325110 OPRPNQ99935 248 aaPredicted RBP9.72□□□□□ -0.85
HMGCS1-201ENST00000325110 TMEM238LA0A1B0GVL6 79 aa9.72□□□□□ -0.85
HMGCS1-201ENST00000325110 A6NJY4 79 aa9.72□□□□□ -0.85
HMGCS1-201ENST00000325110 MSMBP08118 114 aa9.72□□□□□ -0.85
HMGCS1-201ENST00000325110 RNASE3P12724 160 aaKnown RBP9.72□□□□□ -0.85
HMGCS1-201ENST00000325110 TOMM6Q96B49 74 aa9.72□□□□□ -0.85
HMGCS1-201ENST00000325110 C20orf78Q9BR46 151 aa9.72□□□□□ -0.85
HMGCS1-201ENST00000325110 LENEPQ9Y5L5 61 aa9.72□□□□□ -0.85
HMGCS1-201ENST00000325110 ZANQ9Y493 2812 aa9.71□□□□□ -0.85
HMGCS1-201ENST00000325110 SNRPD3P62318 126 aaKnown RBP9.71□□□□□ -0.85
HMGCS1-201ENST00000325110 SUMO4Q6EEV6 95 aa9.71□□□□□ -0.85
HMGCS1-201ENST00000325110 PSMG3-AS1Q96PY0 264 aa9.71□□□□□ -0.85
HMGCS1-201ENST00000325110 ZNF462Q96JM2 2506 aa9.71□□□□□ -0.85
HMGCS1-201ENST00000325110 JMJD1CQ15652 2540 aa9.71□□□□□ -0.86
HMGCS1-201ENST00000325110 C11orf86A6NJI1 115 aa9.71□□□□□ -0.86
HMGCS1-201ENST00000325110 LGALS1P09382 135 aaKnown RBP9.71□□□□□ -0.86
HMGCS1-201ENST00000325110 KNCNA6PVL3 124 aa9.7□□□□□ -0.86
HMGCS1-201ENST00000325110 LGALS3P17931 250 aaKnown RBP9.7□□□□□ -0.86
HMGCS1-201ENST00000325110 MDFICQ9P1T7 246 aa9.7□□□□□ -0.86
HMGCS1-201ENST00000325110 FOXI2Q6ZQN5 318 aa9.7□□□□□ -0.86
HMGCS1-201ENST00000325110 TM2D2Q9BX73 214 aa9.7□□□□□ -0.86
HMGCS1-201ENST00000325110 EPG5Q9HCE0 2579 aa9.7□□□□□ -0.86
HMGCS1-201ENST00000325110 PPP1R17O96001 155 aa9.7□□□□□ -0.86
HMGCS1-201ENST00000325110 IGHG2P01859 326 aa9.7□□□□□ -0.86
HMGCS1-201ENST00000325110 RRN3P1Q2M238 152 aa9.69□□□□□ -0.86
HMGCS1-201ENST00000325110 SAMD13Q5VXD3 122 aa9.69□□□□□ -0.86
HMGCS1-201ENST00000325110 NEXN-AS1Q8NBZ9 246 aa9.69□□□□□ -0.86
HMGCS1-201ENST00000325110 BEX4Q9NWD9 120 aaPredicted RBP9.69□□□□□ -0.86
HMGCS1-201ENST00000325110 VCYO14598 125 aa9.69□□□□□ -0.86
HMGCS1-201ENST00000325110 ZNF876PQ49A33 203 aa9.69□□□□□ -0.86
HMGCS1-201ENST00000325110 HIST2H2BDQ6DRA6 164 aa9.69□□□□□ -0.86
HMGCS1-201ENST00000325110 UTP20O75691 2785 aaKnown RBP9.69□□□□□ -0.86
HMGCS1-201ENST00000325110 PRSS2P07478 247 aa9.69□□□□□ -0.86
HMGCS1-201ENST00000325110 RNASE13Q5GAN3 156 aaKnown RBP9.69□□□□□ -0.86
HMGCS1-201ENST00000325110 ZFP2Q6ZN57 461 aa9.69□□□□□ -0.86
HMGCS1-201ENST00000325110 SYT8Q8NBV8 401 aa9.69□□□□□ -0.86
HMGCS1-201ENST00000325110 CFAP46Q8IYW2 2715 aa9.69□□□□□ -0.86
HMGCS1-201ENST00000325110 MTORP42345 2549 aa9.68□□□□□ -0.86
HMGCS1-201ENST00000325110 TRAV2A0A0B4J234 112 aa9.68□□□□□ -0.86
HMGCS1-201ENST00000325110 AVPP01185 164 aa9.68□□□□□ -0.86
HMGCS1-201ENST00000325110 E9PLD3 99 aa9.68□□□□□ -0.86
HMGCS1-201ENST00000325110 DEFB112Q30KQ8 113 aa9.68□□□□□ -0.86
HMGCS1-201ENST00000325110 C10orf105Q8TEF2 133 aa9.68□□□□□ -0.86
HMGCS1-201ENST00000325110 RAX2Q96IS3 184 aa9.68□□□□□ -0.86
HMGCS1-201ENST00000325110 MUC4Q99102 2169 aa9.68□□□□□ -0.86
HMGCS1-201ENST00000325110 IGHV4-4A0A075B6R2 117 aa9.67□□□□□ -0.86
HMGCS1-201ENST00000325110 TRAV12-1A0A0B4J245 112 aa9.67□□□□□ -0.86
HMGCS1-201ENST00000325110 ADARB2-AS1A8MUL3 147 aa9.67□□□□□ -0.86
HMGCS1-201ENST00000325110 PMVKQ15126 192 aa9.67□□□□□ -0.86
HMGCS1-201ENST00000325110 IGHV3OR16-12A0A075B7B8 117 aa9.67□□□□□ -0.86
HMGCS1-201ENST00000325110 DEFB136Q30KP8 78 aa9.67□□□□□ -0.86
HMGCS1-201ENST00000325110 Q8N1Y9 231 aa9.67□□□□□ -0.86
HMGCS1-201ENST00000325110 DUX3Q96PT4 197 aa9.67□□□□□ -0.86
HMGCS1-201ENST00000325110 NOTCH2Q04721 2471 aa9.67□□□□□ -0.86
HMGCS1-201ENST00000325110 CUBNO60494 3623 aa9.66□□□□□ -0.86
HMGCS1-201ENST00000325110 A6NDX4 124 aa9.66□□□□□ -0.86
HMGCS1-201ENST00000325110 PRM2P04554 102 aa9.66□□□□□ -0.86
HMGCS1-201ENST00000325110 PRRC2AP48634 2157 aaKnown RBP9.66□□□□□ -0.86
HMGCS1-201ENST00000325110 ITPR1Q14643 2758 aa9.66□□□□□ -0.86
HMGCS1-201ENST00000325110 TMEM238C9JI98 176 aa9.66□□□□□ -0.86
HMGCS1-201ENST00000325110 AZU1P20160 251 aa9.66□□□□□ -0.86
HMGCS1-201ENST00000325110 INSL3P51460 131 aa9.66□□□□□ -0.86
HMGCS1-201ENST00000325110 TAL2Q16559 108 aa9.66□□□□□ -0.86
HMGCS1-201ENST00000325110 B4DSR2 109 aa9.65□□□□□ -0.86
HMGCS1-201ENST00000325110 NPC2P61916 151 aa9.65□□□□□ -0.86
HMGCS1-201ENST00000325110 PHLDA1Q8WV24 401 aaPredicted RBP9.65□□□□□ -0.86
HMGCS1-201ENST00000325110 PTH2Q96A98 100 aa9.65□□□□□ -0.86
HMGCS1-201ENST00000325110 SIGMAR1Q99720 223 aa9.65□□□□□ -0.86
HMGCS1-201ENST00000325110 CELSR2Q9HCU4 2923 aa9.65□□□□□ -0.86
HMGCS1-201ENST00000325110 SOCS3O14543 225 aa9.65□□□□□ -0.86
HMGCS1-201ENST00000325110 C11orf44Q8N8P7 122 aa9.65□□□□□ -0.86
HMGCS1-201ENST00000325110 F8W1H4 67 aa9.65□□□□□ -0.87
HMGCS1-201ENST00000325110 TRBV7-3A0A075B6L6 115 aa9.64□□□□□ -0.87
HMGCS1-201ENST00000325110 LINC01546A6NGU7 62 aa9.64□□□□□ -0.87
HMGCS1-201ENST00000325110 SPXQ9BT56 116 aa9.64□□□□□ -0.87
HMGCS1-201ENST00000325110 VCX2Q9H322 139 aa9.64□□□□□ -0.87
HMGCS1-201ENST00000325110 DLX4Q92988 240 aaPredicted RBP9.64□□□□□ -0.87
HMGCS1-201ENST00000325110 GAGE12HA6NDE8 117 aa9.64□□□□□ -0.87
HMGCS1-201ENST00000325110 IGHV1OR15-1A0A075B7D0 117 aa9.63□□□□□ -0.87
HMGCS1-201ENST00000325110 P0DMU3 169 aa9.63□□□□□ -0.87
HMGCS1-201ENST00000325110 FAM231AP0DMU4 169 aa9.63□□□□□ -0.87
HMGCS1-201ENST00000325110 FAM231CP0DMU5 169 aa9.63□□□□□ -0.87
HMGCS1-201ENST00000325110 NDUFS8O00217 210 aa9.63□□□□□ -0.87
HMGCS1-201ENST00000325110 DEFB131AP59861 70 aa9.63□□□□□ -0.87
HMGCS1-201ENST00000325110 PAPPA-AS1Q5QFB9 102 aa9.63□□□□□ -0.87
HMGCS1-201ENST00000325110 SPAG8Q99932 426 aaPredicted RBP9.63□□□□□ -0.87
HMGCS1-201ENST00000325110 J3QQQ9 107 aa9.62□□□□□ -0.87
HMGCS1-201ENST00000325110 CD28P10747 220 aa9.62□□□□□ -0.87
HMGCS1-201ENST00000325110 A0A0J9YXV3 536 aa9.62□□□□□ -0.87
HMGCS1-201ENST00000325110 CEMP1Q6PRD7 247 aaPredicted RBP9.62□□□□□ -0.87
HMGCS1-201ENST00000325110 SPANXB1Q9NS25 103 aaPredicted RBP9.62□□□□□ -0.87
HMGCS1-201ENST00000325110 ACANP16112 2415 aa9.62□□□□□ -0.87
HMGCS1-201ENST00000325110 IGHV3-16A0A0C4DH30 117 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms