RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 F6UB75 175 aa13.48□□□□□ -0.25
PRKCB-202ENST00000321728 RNASE3P12724 160 aaKnown RBP13.48□□□□□ -0.25
PRKCB-202ENST00000321728 TRPT1Q86TN4 253 aaKnown RBP13.48□□□□□ -0.25
PRKCB-202ENST00000321728 IGKV3-7A0A075B6H7 116 aa13.47□□□□□ -0.25
PRKCB-202ENST00000321728 F5H697 171 aa13.47□□□□□ -0.25
PRKCB-202ENST00000321728 J3QQQ9 107 aa13.47□□□□□ -0.25
PRKCB-202ENST00000321728 OVOL1O14753 267 aa13.47□□□□□ -0.25
PRKCB-202ENST00000321728 ZNRF2Q8NHG8 242 aa13.47□□□□□ -0.25
PRKCB-202ENST00000321728 LINC00527Q9UJ94 153 aa13.47□□□□□ -0.25
PRKCB-202ENST00000321728 MUC4Q99102 2169 aa13.47□□□□□ -0.25
PRKCB-202ENST00000321728 A4D1N5 150 aa13.47□□□□□ -0.25
PRKCB-202ENST00000321728 CRIP2P52943 208 aaPredicted RBP13.47□□□□□ -0.25
PRKCB-202ENST00000321728 SS18L2Q9UHA2 77 aa13.47□□□□□ -0.25
PRKCB-202ENST00000321728 KLK9Q2XQG4 91 aa13.46□□□□□ -0.25
PRKCB-202ENST00000321728 TMEM141Q96I45 108 aa13.46□□□□□ -0.25
PRKCB-202ENST00000321728 JPT2Q9H910 190 aa13.46□□□□□ -0.25
PRKCB-202ENST00000321728 KLK9Q9UKQ9 250 aa13.46□□□□□ -0.25
PRKCB-202ENST00000321728 MED14OSP0DP75 135 aa13.46□□□□□ -0.26
PRKCB-202ENST00000321728 A0A087WWL8 130 aa13.45□□□□□ -0.26
PRKCB-202ENST00000321728 VCYO14598 125 aa13.45□□□□□ -0.26
PRKCB-202ENST00000321728 UNQ9165/PRO28630Q6UXU0 137 aa13.45□□□□□ -0.26
PRKCB-202ENST00000321728 SAA4P35542 130 aa13.45□□□□□ -0.26
PRKCB-202ENST00000321728 SUMO4Q6EEV6 95 aa13.45□□□□□ -0.26
PRKCB-202ENST00000321728 POLR2KP53803 58 aaKnown RBP13.44□□□□□ -0.26
PRKCB-202ENST00000321728 AMELXQ99217 191 aa13.44□□□□□ -0.26
PRKCB-202ENST00000321728 SIRPDQ9H106 197 aa13.44□□□□□ -0.26
PRKCB-202ENST00000321728 SPTBN4Q9H254 2564 aa13.44□□□□□ -0.26
PRKCB-202ENST00000321728 TRAV2A0A0B4J234 112 aa13.44□□□□□ -0.26
PRKCB-202ENST00000321728 LINC00315P59091 139 aa13.44□□□□□ -0.26
PRKCB-202ENST00000321728 TIMM17AQ99595 171 aa13.44□□□□□ -0.26
PRKCB-202ENST00000321728 IGHV4OR15-8A0A075B7B6 117 aa13.43□□□□□ -0.26
PRKCB-202ENST00000321728 A0A087WW49 117 aa13.43□□□□□ -0.26
PRKCB-202ENST00000321728 SDHAF1A6NFY7 115 aa13.43□□□□□ -0.26
PRKCB-202ENST00000321728 GAGE5Q13069 117 aa13.43□□□□□ -0.26
PRKCB-202ENST00000321728 GAGE6Q13070 117 aa13.43□□□□□ -0.26
PRKCB-202ENST00000321728 Q1RN00 199 aa13.43□□□□□ -0.26
PRKCB-202ENST00000321728 ZNF876PQ49A33 203 aa13.43□□□□□ -0.26
PRKCB-202ENST00000321728 KIF25-AS1Q9Y6Z4 181 aa13.43□□□□□ -0.26
PRKCB-202ENST00000321728 IGHV3-64A0A075B6Q5 118 aa13.43□□□□□ -0.26
PRKCB-202ENST00000321728 IGHV3OR16-10A0A075B7F0 116 aa13.43□□□□□ -0.26
PRKCB-202ENST00000321728 AJUBAQ96IF1 538 aa13.43□□□□□ -0.26
PRKCB-202ENST00000321728 HIVEP3Q5T1R4 2406 aa13.42□□□□□ -0.26
PRKCB-202ENST00000321728 SNCGO76070 127 aa13.42□□□□□ -0.26
PRKCB-202ENST00000321728 IGHV3-33P01772 117 aa13.42□□□□□ -0.26
PRKCB-202ENST00000321728 TMEM219Q86XT9 240 aa13.42□□□□□ -0.26
PRKCB-202ENST00000321728 CITED1Q99966 193 aa13.42□□□□□ -0.26
PRKCB-202ENST00000321728 ZNF256Q9Y2P7 627 aaPredicted RBP13.42□□□□□ -0.26
PRKCB-202ENST00000321728 B5MCH6 92 aa13.42□□□□□ -0.26
PRKCB-202ENST00000321728 TRBV12-3P01733 135 aa13.42□□□□□ -0.26
PRKCB-202ENST00000321728 UBE2E1P51965 193 aa13.42□□□□□ -0.26
PRKCB-202ENST00000321728 POM121L12Q8N7R1 296 aa13.42□□□□□ -0.26
PRKCB-202ENST00000321728 RPL32P62910 135 aaKnown RBP13.41□□□□□ -0.26
PRKCB-202ENST00000321728 GAGE2BQ13066 116 aa13.41□□□□□ -0.26
PRKCB-202ENST00000321728 GAGE2EQ4V326 116 aa13.41□□□□□ -0.26
PRKCB-202ENST00000321728 OPRPNQ99935 248 aaPredicted RBP13.41□□□□□ -0.26
PRKCB-202ENST00000321728 GAGE2DQ9UEU5 116 aa13.41□□□□□ -0.26
PRKCB-202ENST00000321728 SOCS3O14543 225 aa13.41□□□□□ -0.26
PRKCB-202ENST00000321728 FAM74A4Q5TZK3 123 aa13.41□□□□□ -0.26
PRKCB-202ENST00000321728 NTN5Q8WTR8 489 aaPredicted RBP13.41□□□□□ -0.26
PRKCB-202ENST00000321728 TRAV41A0A0B4J266 112 aa13.4□□□□□ -0.26
PRKCB-202ENST00000321728 EIF4EBP3O60516 100 aaPredicted RBP13.4□□□□□ -0.26
PRKCB-202ENST00000321728 FAM159AQ6UWV7 190 aa13.4□□□□□ -0.26
PRKCB-202ENST00000321728 TMEM263Q8WUH6 116 aaKnown RBP13.4□□□□□ -0.26
PRKCB-202ENST00000321728 IGHV4-39P01824 125 aa13.4□□□□□ -0.26
PRKCB-202ENST00000321728 MUSTN1Q8IVN3 82 aa13.4□□□□□ -0.26
PRKCB-202ENST00000321728 FAM19A4Q96LR4 140 aa13.4□□□□□ -0.26
PRKCB-202ENST00000321728 BEX4Q9NWD9 120 aaPredicted RBP13.4□□□□□ -0.26
PRKCB-202ENST00000321728 SPG11Q96JI7 2443 aa13.4□□□□□ -0.26
PRKCB-202ENST00000321728 C5orf56Q8N8D9 126 aa13.39□□□□□ -0.27
PRKCB-202ENST00000321728 NXPH4O95158 308 aa13.39□□□□□ -0.27
PRKCB-202ENST00000321728 SRD5A1P18405 259 aa13.39□□□□□ -0.27
PRKCB-202ENST00000321728 TRAV4A0A0B4J268 109 aa13.38□□□□□ -0.27
PRKCB-202ENST00000321728 Q8N1Y9 231 aa13.38□□□□□ -0.27
PRKCB-202ENST00000321728 A0A1W2PPR1 153 aa13.38□□□□□ -0.27
PRKCB-202ENST00000321728 FAM223BA6NKX1 122 aa13.38□□□□□ -0.27
PRKCB-202ENST00000321728 RHODO00212 210 aa13.38□□□□□ -0.27
PRKCB-202ENST00000321728 ELANEP08246 267 aa13.38□□□□□ -0.27
PRKCB-202ENST00000321728 FAM223AQ8IWN6 122 aa13.38□□□□□ -0.27
PRKCB-202ENST00000321728 LEPROTO15243 131 aa13.37□□□□□ -0.27
PRKCB-202ENST00000321728 CRLF1O75462 422 aa13.37□□□□□ -0.27
PRKCB-202ENST00000321728 NHLRC4P0CG21 123 aaPredicted RBP13.37□□□□□ -0.27
PRKCB-202ENST00000321728 ATXN8Q156A1 80 aa13.37□□□□□ -0.27
PRKCB-202ENST00000321728 CRYBG3Q68DQ2 2970 aa13.37□□□□□ -0.27
PRKCB-202ENST00000321728 C11orf71Q6IPW1 123 aa13.37□□□□□ -0.27
PRKCB-202ENST00000321728 A0A0B4J2C4 111 aa13.36□□□□□ -0.27
PRKCB-202ENST00000321728 TRBV27A0A0K0K1C4 114 aa13.36□□□□□ -0.27
PRKCB-202ENST00000321728 TMEM223A0PJW6 202 aa13.36□□□□□ -0.27
PRKCB-202ENST00000321728 M0QXV9 152 aa13.36□□□□□ -0.27
PRKCB-202ENST00000321728 IGHV3-11P01762 117 aa13.36□□□□□ -0.27
PRKCB-202ENST00000321728 P0DMU3 169 aa13.36□□□□□ -0.27
PRKCB-202ENST00000321728 FAM231AP0DMU4 169 aa13.36□□□□□ -0.27
PRKCB-202ENST00000321728 FAM231CP0DMU5 169 aa13.36□□□□□ -0.27
PRKCB-202ENST00000321728 NDUFV3P56181 108 aaKnown RBP13.36□□□□□ -0.27
PRKCB-202ENST00000321728 TTC32Q5I0X7 151 aa13.36□□□□□ -0.27
PRKCB-202ENST00000321728 APRG1Q8IVJ8 170 aa13.36□□□□□ -0.27
PRKCB-202ENST00000321728 TEX49A0A1B0GTD5 131 aa13.36□□□□□ -0.27
PRKCB-202ENST00000321728 NDUFA4O00483 81 aa13.36□□□□□ -0.27
PRKCB-202ENST00000321728 ADORA2A-AS1P86434 159 aa13.36□□□□□ -0.27
PRKCB-202ENST00000321728 LINC01620Q4KN68 170 aa13.36□□□□□ -0.27
PRKCB-202ENST00000321728 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 221.2 ms