RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 PSMB8P28062 276 aa7.06□□□□□ -1.28
TMEM39A-201ENST00000319172 COL5A1-AS1Q5SY13 56 aa7.06□□□□□ -1.28
TMEM39A-201ENST00000319172 C9orf47Q6ZRZ4 202 aa7.06□□□□□ -1.28
TMEM39A-201ENST00000319172 MLST8Q9BVC4 326 aa7.06□□□□□ -1.28
TMEM39A-201ENST00000319172 ADGRG4Q8IZF6 3080 aa7.06□□□□□ -1.28
TMEM39A-201ENST00000319172 CLPSL1A2RUU4 121 aa7.06□□□□□ -1.28
TMEM39A-201ENST00000319172 ZNF664Q8N3J9 261 aa7.06□□□□□ -1.28
TMEM39A-201ENST00000319172 C4orf3Q8WVX3 66 aa7.06□□□□□ -1.28
TMEM39A-201ENST00000319172 FAM110AQ9BQ89 295 aa7.06□□□□□ -1.28
TMEM39A-201ENST00000319172 LY6G6DO95868 133 aa7.06□□□□□ -1.28
TMEM39A-201ENST00000319172 MYCNOSP40205 109 aa7.06□□□□□ -1.28
TMEM39A-201ENST00000319172 C20orf173Q96LM9 149 aa7.06□□□□□ -1.28
TMEM39A-201ENST00000319172 MRPL16Q9NX20 251 aaKnown RBP7.06□□□□□ -1.28
TMEM39A-201ENST00000319172 PGPEP1Q9NXJ5 209 aa7.06□□□□□ -1.28
TMEM39A-201ENST00000319172 IGHV1-24A0A0C4DH33 117 aa7.06□□□□□ -1.28
TMEM39A-201ENST00000319172 DPM2O94777 84 aa7.06□□□□□ -1.28
TMEM39A-201ENST00000319172 CDPF1Q6NVV7 123 aa7.05□□□□□ -1.28
TMEM39A-201ENST00000319172 F8W735 103 aaPredicted RBP7.05□□□□□ -1.28
TMEM39A-201ENST00000319172 ITPR3Q14573 2671 aa7.05□□□□□ -1.28
TMEM39A-201ENST00000319172 IGHV3-64A0A075B6Q5 118 aa7.05□□□□□ -1.28
TMEM39A-201ENST00000319172 SDHAF1A6NFY7 115 aa7.05□□□□□ -1.28
TMEM39A-201ENST00000319172 APOC4P55056 127 aa7.05□□□□□ -1.28
TMEM39A-201ENST00000319172 KIR3DS1Q14943 382 aa7.05□□□□□ -1.28
TMEM39A-201ENST00000319172 LINC01559Q495D7 138 aa7.05□□□□□ -1.28
TMEM39A-201ENST00000319172 F8WDY8 70 aa7.04□□□□□ -1.28
TMEM39A-201ENST00000319172 RBX1P62877 108 aa7.04□□□□□ -1.28
TMEM39A-201ENST00000319172 LAMTOR2Q9Y2Q5 125 aa7.04□□□□□ -1.28
TMEM39A-201ENST00000319172 FLNCQ14315 2725 aa7.04□□□□□ -1.28
TMEM39A-201ENST00000319172 DSCAML1Q8TD84 2053 aa7.04□□□□□ -1.28
TMEM39A-201ENST00000319172 IGHV3-38A0A0C4DH36 116 aa7.04□□□□□ -1.28
TMEM39A-201ENST00000319172 IGLV1-40P01703 118 aa7.04□□□□□ -1.28
TMEM39A-201ENST00000319172 IGKCP01834 107 aa7.04□□□□□ -1.28
TMEM39A-201ENST00000319172 EDN2P20800 178 aa7.04□□□□□ -1.28
TMEM39A-201ENST00000319172 A0A0J9YX75 114 aa7.04□□□□□ -1.28
TMEM39A-201ENST00000319172 GAGE12JA6NER3 117 aa7.04□□□□□ -1.28
TMEM39A-201ENST00000319172 AZU1P20160 251 aa7.04□□□□□ -1.28
TMEM39A-201ENST00000319172 CRIP1P50238 77 aa7.04□□□□□ -1.28
TMEM39A-201ENST00000319172 GAGE4Q13068 117 aa7.04□□□□□ -1.28
TMEM39A-201ENST00000319172 GAGE5Q13069 117 aa7.04□□□□□ -1.28
TMEM39A-201ENST00000319172 GAGE13Q4V321 117 aa7.04□□□□□ -1.28
TMEM39A-201ENST00000319172 STPG4Q8N801 248 aa7.04□□□□□ -1.28
TMEM39A-201ENST00000319172 PSMG3-AS1Q96PY0 264 aa7.04□□□□□ -1.28
TMEM39A-201ENST00000319172 C11orf68Q9H3H3 251 aaKnown RBP7.04□□□□□ -1.28
TMEM39A-201ENST00000319172 ZMAT4Q9H898 229 aa7.04□□□□□ -1.28
TMEM39A-201ENST00000319172 Q8N1Y9 231 aa7.03□□□□□ -1.28
TMEM39A-201ENST00000319172 TRAV8-2A0A0B4J237 113 aa7.03□□□□□ -1.28
TMEM39A-201ENST00000319172 TRAV13-1A0A0B4J241 112 aa7.03□□□□□ -1.28
TMEM39A-201ENST00000319172 C2orf66Q6UXQ4 117 aa7.03□□□□□ -1.28
TMEM39A-201ENST00000319172 IGLV2-11P01706 119 aa7.03□□□□□ -1.28
TMEM39A-201ENST00000319172 COA6Q5JTJ3 125 aaKnown RBP7.03□□□□□ -1.28
TMEM39A-201ENST00000319172 ZC2HC1BQ5TFG8 222 aa7.03□□□□□ -1.28
TMEM39A-201ENST00000319172 GDF5OSQ5U4N7 250 aa7.03□□□□□ -1.28
TMEM39A-201ENST00000319172 Q8N8P6 123 aa7.03□□□□□ -1.28
TMEM39A-201ENST00000319172 OR5A1Q8NGJ0 315 aa7.03□□□□□ -1.28
TMEM39A-201ENST00000319172 LINC01006Q8NI28 216 aa7.03□□□□□ -1.28
TMEM39A-201ENST00000319172 SMIM2Q9BVW6 85 aa7.03□□□□□ -1.28
TMEM39A-201ENST00000319172 RPL39LQ96EH5 51 aaKnown RBP7.02□□□□□ -1.29
TMEM39A-201ENST00000319172 TRBV6-1A0A0K0K1D8 114 aa7.02□□□□□ -1.29
TMEM39A-201ENST00000319172 ERASQ7Z444 233 aa7.02□□□□□ -1.29
TMEM39A-201ENST00000319172 TRPT1Q86TN4 253 aaKnown RBP7.02□□□□□ -1.29
TMEM39A-201ENST00000319172 ORAOV1Q8WV07 137 aa7.02□□□□□ -1.29
TMEM39A-201ENST00000319172 TP53TG1Q9Y2A0 90 aa7.02□□□□□ -1.29
TMEM39A-201ENST00000319172 CHD6Q8TD26 2715 aa7.02□□□□□ -1.29
TMEM39A-201ENST00000319172 A0A096LPF7 62 aa7.02□□□□□ -1.29
TMEM39A-201ENST00000319172 K7EQG2 157 aa7.02□□□□□ -1.29
TMEM39A-201ENST00000319172 WIPF1O43516 503 aa7.02□□□□□ -1.29
TMEM39A-201ENST00000319172 MBD6Q96DN6 1003 aa7.02□□□□□ -1.29
TMEM39A-201ENST00000319172 CLUHP3Q96NS8 147 aa7.02□□□□□ -1.29
TMEM39A-201ENST00000319172 A8MWV9 139 aa7.01□□□□□ -1.29
TMEM39A-201ENST00000319172 LINC00173Q6ZV60 143 aa7.01□□□□□ -1.29
TMEM39A-201ENST00000319172 COPS9Q8WXC6 57 aa7.01□□□□□ -1.29
TMEM39A-201ENST00000319172 JPT2Q9H910 190 aa7.01□□□□□ -1.29
TMEM39A-201ENST00000319172 NOP10Q9NPE3 64 aaKnown RBP7.01□□□□□ -1.29
TMEM39A-201ENST00000319172 MDFICQ9P1T7 246 aa7.01□□□□□ -1.29
TMEM39A-201ENST00000319172 U3KQE9 123 aa7.01□□□□□ -1.29
TMEM39A-201ENST00000319172 ZZEF1O43149 2961 aa7.01□□□□□ -1.29
TMEM39A-201ENST00000319172 APOMO95445 188 aa7.01□□□□□ -1.29
TMEM39A-201ENST00000319172 DNAL4O96015 105 aa7.01□□□□□ -1.29
TMEM39A-201ENST00000319172 ZNRF2Q8NHG8 242 aa7.01□□□□□ -1.29
TMEM39A-201ENST00000319172 SETXQ7Z333 2677 aaKnown RBP7.01□□□□□ -1.29
TMEM39A-201ENST00000319172 RHODO00212 210 aa7.01□□□□□ -1.29
TMEM39A-201ENST00000319172 C9orf66Q5T8R8 295 aa7.01□□□□□ -1.29
TMEM39A-201ENST00000319172 YPEL4Q96NS1 127 aa7.01□□□□□ -1.29
TMEM39A-201ENST00000319172 CKS1BP61024 79 aa7□□□□□ -1.29
TMEM39A-201ENST00000319172 MAP6D1Q9H9H5 199 aa7□□□□□ -1.29
TMEM39A-201ENST00000319172 CTRLP40313 264 aa7□□□□□ -1.29
TMEM39A-201ENST00000319172 KLF5Q13887 457 aaPredicted RBP7□□□□□ -1.29
TMEM39A-201ENST00000319172 COL12A1Q99715 3063 aa7□□□□□ -1.29
TMEM39A-201ENST00000319172 TRBV7-9A0A0J9YWB2 115 aa7□□□□□ -1.29
TMEM39A-201ENST00000319172 M0R2P5 195 aa7□□□□□ -1.29
TMEM39A-201ENST00000319172 DEFB114Q30KQ6 69 aa7□□□□□ -1.29
TMEM39A-201ENST00000319172 ADAMTSL5Q6ZMM2 481 aa7□□□□□ -1.29
TMEM39A-201ENST00000319172 TRAV25A0A0B4J276 109 aa6.99□□□□□ -1.29
TMEM39A-201ENST00000319172 A0A1B0GXF2 115 aa6.99□□□□□ -1.29
TMEM39A-201ENST00000319172 LGALS9O00182 355 aa6.99□□□□□ -1.29
TMEM39A-201ENST00000319172 MRPS12O15235 138 aaKnown RBP6.99□□□□□ -1.29
TMEM39A-201ENST00000319172 TP53TG3Q9ULZ0 132 aa6.99□□□□□ -1.29
TMEM39A-201ENST00000319172 C6orf226Q5I0X4 101 aa6.99□□□□□ -1.29
TMEM39A-201ENST00000319172 Q6ZQT7 251 aa6.99□□□□□ -1.29
TMEM39A-201ENST00000319172 ZFAND2AQ8N6M9 145 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms