RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 CEMP1Q6PRD7 247 aaPredicted RBP7.27□□□□□ -1.24
RPGR-201ENST00000318842 CHD6Q8TD26 2715 aa7.27□□□□□ -1.25
RPGR-201ENST00000318842 SCGB1C2P0DMR2 95 aa7.27□□□□□ -1.25
RPGR-201ENST00000318842 NPBQ8NG41 125 aa7.27□□□□□ -1.25
RPGR-201ENST00000318842 Q9UF83 564 aa7.27□□□□□ -1.25
RPGR-201ENST00000318842 ABCA12Q86UK0 2595 aa7.27□□□□□ -1.25
RPGR-201ENST00000318842 MYO18BQ8IUG5 2567 aa7.27□□□□□ -1.25
RPGR-201ENST00000318842 NEXN-AS1Q8NBZ9 246 aa7.27□□□□□ -1.25
RPGR-201ENST00000318842 CFAP126Q5VTH2 177 aa7.26□□□□□ -1.25
RPGR-201ENST00000318842 GPHB5Q86YW7 130 aa7.26□□□□□ -1.25
RPGR-201ENST00000318842 CNFNQ9BYD5 112 aa7.26□□□□□ -1.25
RPGR-201ENST00000318842 IGHV4-39P01824 125 aa7.26□□□□□ -1.25
RPGR-201ENST00000318842 C10orf99Q6UWK7 81 aa7.26□□□□□ -1.25
RPGR-201ENST00000318842 ZNRF2Q8NHG8 242 aa7.26□□□□□ -1.25
RPGR-201ENST00000318842 ODF3BA8MYP8 253 aa7.25□□□□□ -1.25
RPGR-201ENST00000318842 CRLF1O75462 422 aa7.25□□□□□ -1.25
RPGR-201ENST00000318842 FOXC1Q12948 553 aa7.25□□□□□ -1.25
RPGR-201ENST00000318842 ANKRD29Q8N6D5 301 aa7.25□□□□□ -1.25
RPGR-201ENST00000318842 OR11H6Q8NGC7 330 aa7.25□□□□□ -1.25
RPGR-201ENST00000318842 AJUBAQ96IF1 538 aa7.25□□□□□ -1.25
RPGR-201ENST00000318842 TRAV2A0A0B4J234 112 aa7.25□□□□□ -1.25
RPGR-201ENST00000318842 TRAV12-3A0A0B4J271 114 aa7.25□□□□□ -1.25
RPGR-201ENST00000318842 P0DMU3 169 aa7.25□□□□□ -1.25
RPGR-201ENST00000318842 FAM231AP0DMU4 169 aa7.25□□□□□ -1.25
RPGR-201ENST00000318842 FAM231CP0DMU5 169 aa7.25□□□□□ -1.25
RPGR-201ENST00000318842 ZFAND2AQ8N6M9 145 aa7.25□□□□□ -1.25
RPGR-201ENST00000318842 KLK9Q9UKQ9 250 aa7.25□□□□□ -1.25
RPGR-201ENST00000318842 PLNP26678 52 aa7.25□□□□□ -1.25
RPGR-201ENST00000318842 LY6G5BQ8NDX9 201 aa7.25□□□□□ -1.25
RPGR-201ENST00000318842 C1QTNF4Q9BXJ3 329 aa7.25□□□□□ -1.25
RPGR-201ENST00000318842 IGLV4-69A0A075B6H9 119 aa7.24□□□□□ -1.25
RPGR-201ENST00000318842 CFC1BP0CG36 223 aa7.24□□□□□ -1.25
RPGR-201ENST00000318842 CFC1P0CG37 223 aa7.24□□□□□ -1.25
RPGR-201ENST00000318842 Q6ZUT4 128 aa7.24□□□□□ -1.25
RPGR-201ENST00000318842 DAND5Q8N907 189 aa7.24□□□□□ -1.25
RPGR-201ENST00000318842 DUX5Q96PT3 197 aa7.24□□□□□ -1.25
RPGR-201ENST00000318842 METTL26Q96S19 204 aa7.24□□□□□ -1.25
RPGR-201ENST00000318842 NBEAL2Q6ZNJ1 2754 aa7.24□□□□□ -1.25
RPGR-201ENST00000318842 A0A0U1RRA0 63 aa7.24□□□□□ -1.25
RPGR-201ENST00000318842 C9JAW5 83 aa7.24□□□□□ -1.25
RPGR-201ENST00000318842 NAV2Q8IVL1 2488 aa7.24□□□□□ -1.25
RPGR-201ENST00000318842 RNASE3P12724 160 aaKnown RBP7.23□□□□□ -1.25
RPGR-201ENST00000318842 PROK1P58294 105 aa7.23□□□□□ -1.25
RPGR-201ENST00000318842 DLX4Q92988 240 aaPredicted RBP7.23□□□□□ -1.25
RPGR-201ENST00000318842 TOMM6Q96B49 74 aa7.23□□□□□ -1.25
RPGR-201ENST00000318842 CITED1Q99966 193 aa7.23□□□□□ -1.25
RPGR-201ENST00000318842 J3QR89 54 aa7.23□□□□□ -1.25
RPGR-201ENST00000318842 RPL32P62910 135 aaKnown RBP7.23□□□□□ -1.25
RPGR-201ENST00000318842 Q8N6K4 173 aa7.23□□□□□ -1.25
RPGR-201ENST00000318842 ERG28Q9UKR5 140 aa7.23□□□□□ -1.25
RPGR-201ENST00000318842 CD7P09564 240 aa7.23□□□□□ -1.25
RPGR-201ENST00000318842 ID1P41134 155 aa7.23□□□□□ -1.25
RPGR-201ENST00000318842 BLCAPP62952 87 aa7.23□□□□□ -1.25
RPGR-201ENST00000318842 GAGE5Q13069 117 aa7.23□□□□□ -1.25
RPGR-201ENST00000318842 GAGE6Q13070 117 aa7.23□□□□□ -1.25
RPGR-201ENST00000318842 NDUFA11Q86Y39 141 aa7.23□□□□□ -1.25
RPGR-201ENST00000318842 BPESC1Q9GZL8 116 aa7.23□□□□□ -1.25
RPGR-201ENST00000318842 MDFICQ9P1T7 246 aa7.23□□□□□ -1.25
RPGR-201ENST00000318842 A0A0J9YY99 117 aa7.22□□□□□ -1.25
RPGR-201ENST00000318842 KNCNA6PVL3 124 aa7.22□□□□□ -1.25
RPGR-201ENST00000318842 COX6B1P14854 86 aa7.22□□□□□ -1.25
RPGR-201ENST00000318842 YAE1D1Q9NRH1 226 aa7.22□□□□□ -1.25
RPGR-201ENST00000318842 NBPF19A0A087WUL8 3843 aa7.22□□□□□ -1.25
RPGR-201ENST00000318842 TRAV8-3A0A0A6YYJ7 113 aa7.22□□□□□ -1.25
RPGR-201ENST00000318842 A4D1N5 150 aa7.22□□□□□ -1.25
RPGR-201ENST00000318842 LINC01546A6NGU7 62 aa7.22□□□□□ -1.25
RPGR-201ENST00000318842 B5MCH6 92 aa7.22□□□□□ -1.25
RPGR-201ENST00000318842 Q1RN00 199 aa7.22□□□□□ -1.25
RPGR-201ENST00000318842 C9orf47Q6ZRZ4 202 aa7.22□□□□□ -1.25
RPGR-201ENST00000318842 COX8CQ7Z4L0 72 aa7.22□□□□□ -1.25
RPGR-201ENST00000318842 CCDC168Q8NDH2 2452 aa7.22□□□□□ -1.25
RPGR-201ENST00000318842 TEX49A0A1B0GTD5 131 aa7.21□□□□□ -1.25
RPGR-201ENST00000318842 RBAKDNA6NC62 111 aa7.21□□□□□ -1.25
RPGR-201ENST00000318842 ACACBO00763 2458 aa7.21□□□□□ -1.25
RPGR-201ENST00000318842 ASIPP42127 132 aa7.21□□□□□ -1.25
RPGR-201ENST00000318842 SUMO4Q6EEV6 95 aa7.21□□□□□ -1.25
RPGR-201ENST00000318842 SMIM20Q8N5G0 67 aa7.21□□□□□ -1.25
RPGR-201ENST00000318842 TIMD4Q96H15 378 aa7.21□□□□□ -1.25
RPGR-201ENST00000318842 TEX15Q9BXT5 2789 aa7.21□□□□□ -1.26
RPGR-201ENST00000318842 TCF15Q12870 199 aa7.21□□□□□ -1.26
RPGR-201ENST00000318842 TRAV4A0A0B4J268 109 aa7.21□□□□□ -1.26
RPGR-201ENST00000318842 ZNF688P0C7X2 276 aa7.21□□□□□ -1.26
RPGR-201ENST00000318842 A0A0J9YXV3 536 aa7.2□□□□□ -1.26
RPGR-201ENST00000318842 PRSS2P07478 247 aa7.2□□□□□ -1.26
RPGR-201ENST00000318842 PIFOQ8TCI5 191 aa7.2□□□□□ -1.26
RPGR-201ENST00000318842 RNF5Q99942 180 aa7.2□□□□□ -1.26
RPGR-201ENST00000318842 DPH3P1Q9H4G8 78 aa7.2□□□□□ -1.26
RPGR-201ENST00000318842 PRRC2AP48634 2157 aaKnown RBP7.2□□□□□ -1.26
RPGR-201ENST00000318842 UBE2D1P51668 147 aa7.2□□□□□ -1.26
RPGR-201ENST00000318842 ZNF56Q15929 161 aa7.2□□□□□ -1.26
RPGR-201ENST00000318842 FAM110DQ8TAY7 271 aaPredicted RBP7.2□□□□□ -1.26
RPGR-201ENST00000318842 NTN5Q8WTR8 489 aaPredicted RBP7.2□□□□□ -1.26
RPGR-201ENST00000318842 LRRK2Q5S007 2527 aa7.2□□□□□ -1.26
RPGR-201ENST00000318842 SDHAF1A6NFY7 115 aa7.19□□□□□ -1.26
RPGR-201ENST00000318842 OR10J6PQ8NGY7 276 aa7.19□□□□□ -1.26
RPGR-201ENST00000318842 SLC50A1Q9BRV3 221 aa7.19□□□□□ -1.26
RPGR-201ENST00000318842 ZNF469Q96JG9 3925 aaPredicted RBP7.19□□□□□ -1.26
RPGR-201ENST00000318842 IGHV3-30P01768 117 aa7.19□□□□□ -1.26
RPGR-201ENST00000318842 IGHV3-30-5P0DP03 117 aa7.19□□□□□ -1.26
RPGR-201ENST00000318842 ADORA2A-AS1P86434 159 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms