RNA–Protein interactions for RNA: ENST00000318024.8

USH1C-202, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USH1C, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-202ENST00000318024 FAM223AQ8IWN6 122 aa11.99□□□□□ -0.49
USH1C-202ENST00000318024 H7C1H1 209 aa11.99□□□□□ -0.49
USH1C-202ENST00000318024 RAB9AP51151 201 aa11.99□□□□□ -0.49
USH1C-202ENST00000318024 INSL3P51460 131 aa11.99□□□□□ -0.49
USH1C-202ENST00000318024 CFHR3Q02985 330 aa11.99□□□□□ -0.49
USH1C-202ENST00000318024 GAGE13Q4V321 117 aa11.99□□□□□ -0.49
USH1C-202ENST00000318024 HIST1H4GQ99525 98 aa11.99□□□□□ -0.49
USH1C-202ENST00000318024 ZNF702PQ9H963 129 aa11.99□□□□□ -0.49
USH1C-202ENST00000318024 FLNBO75369 2602 aaKnown RBP11.99□□□□□ -0.49
USH1C-202ENST00000318024 MYMXA0A1B0GTQ4 84 aa11.98□□□□□ -0.49
USH1C-202ENST00000318024 IGLV1-40P01703 118 aa11.98□□□□□ -0.49
USH1C-202ENST00000318024 MRPL53Q96EL3 112 aaKnown RBP11.98□□□□□ -0.49
USH1C-202ENST00000318024 SMIM2Q9BVW6 85 aa11.98□□□□□ -0.49
USH1C-202ENST00000318024 IGHV3OR16-13A0A075B7E8 117 aa11.98□□□□□ -0.49
USH1C-202ENST00000318024 IGHV3-74A0A0B4J1X5 117 aa11.98□□□□□ -0.49
USH1C-202ENST00000318024 SCGB2A1O75556 95 aa11.98□□□□□ -0.49
USH1C-202ENST00000318024 C9orf47Q6ZRZ4 202 aa11.98□□□□□ -0.49
USH1C-202ENST00000318024 NEXN-AS1Q8NBZ9 246 aa11.98□□□□□ -0.49
USH1C-202ENST00000318024 IGHV3-66A0A0C4DH42 116 aa11.97□□□□□ -0.49
USH1C-202ENST00000318024 MRAP2Q96G30 205 aa11.97□□□□□ -0.49
USH1C-202ENST00000318024 LGALS1P09382 135 aaKnown RBP11.96□□□□□ -0.49
USH1C-202ENST00000318024 TOMM6Q96B49 74 aa11.96□□□□□ -0.49
USH1C-202ENST00000318024 ATP6V0BQ99437 205 aa11.96□□□□□ -0.49
USH1C-202ENST00000318024 IGHV3-49A0A0A0MS15 119 aa11.96□□□□□ -0.49
USH1C-202ENST00000318024 ARL3P36405 182 aa11.96□□□□□ -0.49
USH1C-202ENST00000318024 SMCPP49901 116 aaPredicted RBP11.96□□□□□ -0.49
USH1C-202ENST00000318024 MTURNQ8N3F0 131 aa11.96□□□□□ -0.49
USH1C-202ENST00000318024 ESM1Q9NQ30 184 aa11.96□□□□□ -0.49
USH1C-202ENST00000318024 TEX29Q8N6K0 151 aa11.95□□□□□ -0.5
USH1C-202ENST00000318024 USMG5Q96IX5 58 aa11.95□□□□□ -0.5
USH1C-202ENST00000318024 UFC1Q9Y3C8 167 aa11.95□□□□□ -0.5
USH1C-202ENST00000318024 DNAJC9-AS1A6NH13 148 aa11.95□□□□□ -0.5
USH1C-202ENST00000318024 H3BUA1 57 aa11.95□□□□□ -0.5
USH1C-202ENST00000318024 PSMB8P28062 276 aa11.95□□□□□ -0.5
USH1C-202ENST00000318024 U3KQE9 123 aa11.95□□□□□ -0.5
USH1C-202ENST00000318024 OR11H12B2RN74 326 aa11.94□□□□□ -0.5
USH1C-202ENST00000318024 PRR9Q5T870 116 aa11.94□□□□□ -0.5
USH1C-202ENST00000318024 CFAP126Q5VTH2 177 aa11.94□□□□□ -0.5
USH1C-202ENST00000318024 OR11H1Q8NG94 326 aa11.94□□□□□ -0.5
USH1C-202ENST00000318024 OR11H2Q8NH07 326 aa11.94□□□□□ -0.5
USH1C-202ENST00000318024 RASL10AQ92737 203 aa11.94□□□□□ -0.5
USH1C-202ENST00000318024 HIVEP2P31629 2446 aa11.94□□□□□ -0.5
USH1C-202ENST00000318024 LY6G6DO95868 133 aa11.94□□□□□ -0.5
USH1C-202ENST00000318024 UBE2D1P51668 147 aa11.94□□□□□ -0.5
USH1C-202ENST00000318024 TMEM78Q5T7P6 136 aa11.94□□□□□ -0.5
USH1C-202ENST00000318024 HIST2H2BDQ6DRA6 164 aa11.94□□□□□ -0.5
USH1C-202ENST00000318024 TCTEX1D4Q5JR98 221 aa11.93□□□□□ -0.5
USH1C-202ENST00000318024 SPANXN1Q5VSR9 72 aa11.93□□□□□ -0.5
USH1C-202ENST00000318024 UNQ9165/PRO28630Q6UXU0 137 aa11.93□□□□□ -0.5
USH1C-202ENST00000318024 C8orf86Q6ZUL3 223 aa11.93□□□□□ -0.5
USH1C-202ENST00000318024 ATP6V0E2Q8NHE4 81 aa11.93□□□□□ -0.5
USH1C-202ENST00000318024 BRI3O95415 125 aa11.92□□□□□ -0.5
USH1C-202ENST00000318024 ORMDL2Q53FV1 153 aa11.92□□□□□ -0.5
USH1C-202ENST00000318024 CYSLTR1Q9Y271 337 aa11.92□□□□□ -0.5
USH1C-202ENST00000318024 H3BVH4 76 aa11.92□□□□□ -0.5
USH1C-202ENST00000318024 BAALCQ8WXS3 180 aa11.92□□□□□ -0.5
USH1C-202ENST00000318024 SCGB3A1Q96QR1 104 aa11.92□□□□□ -0.5
USH1C-202ENST00000318024 C20orf78Q9BR46 151 aa11.92□□□□□ -0.5
USH1C-202ENST00000318024 CDIP1Q9H305 208 aa11.92□□□□□ -0.5
USH1C-202ENST00000318024 SUMO2P61956 95 aaKnown RBP11.91□□□□□ -0.5
USH1C-202ENST00000318024 FOXI1Q12951 378 aa11.91□□□□□ -0.5
USH1C-202ENST00000318024 PRADC1Q9BSG0 188 aa11.91□□□□□ -0.5
USH1C-202ENST00000318024 PGPEP1Q9NXJ5 209 aa11.91□□□□□ -0.5
USH1C-202ENST00000318024 ZNF580Q9UK33 172 aa11.91□□□□□ -0.5
USH1C-202ENST00000318024 C1QTNF4Q9BXJ3 329 aa11.9□□□□□ -0.5
USH1C-202ENST00000318024 PRSS29PA6NIE9 313 aa11.9□□□□□ -0.51
USH1C-202ENST00000318024 CD7P09564 240 aa11.9□□□□□ -0.51
USH1C-202ENST00000318024 SRD5A1P18405 259 aa11.9□□□□□ -0.51
USH1C-202ENST00000318024 UBE2D3P61077 147 aa11.9□□□□□ -0.51
USH1C-202ENST00000318024 UBE2D2P62837 147 aa11.9□□□□□ -0.51
USH1C-202ENST00000318024 NFE4Q86UQ8 179 aa11.9□□□□□ -0.51
USH1C-202ENST00000318024 TMEM86BQ8N661 226 aa11.9□□□□□ -0.51
USH1C-202ENST00000318024 PLEKHB2Q96CS7 222 aa11.9□□□□□ -0.51
USH1C-202ENST00000318024 METTL26Q96S19 204 aa11.9□□□□□ -0.51
USH1C-202ENST00000318024 LENEPQ9Y5L5 61 aa11.9□□□□□ -0.51
USH1C-202ENST00000318024 HIVEP1P15822 2718 aa11.89□□□□□ -0.51
USH1C-202ENST00000318024 Q6ZSV7 163 aa11.89□□□□□ -0.51
USH1C-202ENST00000318024 RPL39LQ96EH5 51 aaKnown RBP11.89□□□□□ -0.51
USH1C-202ENST00000318024 SETD2Q9BYW2 2564 aaPredicted RBP11.89□□□□□ -0.51
USH1C-202ENST00000318024 APOMO95445 188 aa11.88□□□□□ -0.51
USH1C-202ENST00000318024 CRYGDP07320 174 aa11.88□□□□□ -0.51
USH1C-202ENST00000318024 FHL3Q13643 280 aa11.88□□□□□ -0.51
USH1C-202ENST00000318024 Q8N2B8 174 aa11.88□□□□□ -0.51
USH1C-202ENST00000318024 M0R381 172 aa11.88□□□□□ -0.51
USH1C-202ENST00000318024 TSPAN13O95857 204 aa11.88□□□□□ -0.51
USH1C-202ENST00000318024 CRYBA4P53673 196 aa11.88□□□□□ -0.51
USH1C-202ENST00000318024 C2orf66Q6UXQ4 117 aa11.88□□□□□ -0.51
USH1C-202ENST00000318024 ZFAND2AQ8N6M9 145 aa11.88□□□□□ -0.51
USH1C-202ENST00000318024 DLX4Q92988 240 aaPredicted RBP11.88□□□□□ -0.51
USH1C-202ENST00000318024 C20orf173Q96LM9 149 aa11.88□□□□□ -0.51
USH1C-202ENST00000318024 LINC01549A6NIU2 74 aa11.87□□□□□ -0.51
USH1C-202ENST00000318024 C18orf65Q6ZTR6 163 aa11.87□□□□□ -0.51
USH1C-202ENST00000318024 GPHB5Q86YW7 130 aa11.87□□□□□ -0.51
USH1C-202ENST00000318024 POM121L12Q8N7R1 296 aa11.87□□□□□ -0.51
USH1C-202ENST00000318024 NDUFA4O00483 81 aa11.87□□□□□ -0.51
USH1C-202ENST00000318024 EDN2P20800 178 aa11.87□□□□□ -0.51
USH1C-202ENST00000318024 DPH3P1Q9H4G8 78 aa11.87□□□□□ -0.51
USH1C-202ENST00000318024 ZNF815PA8K554 130 aa11.86□□□□□ -0.51
USH1C-202ENST00000318024 SPRY2O43597 315 aa11.86□□□□□ -0.51
USH1C-202ENST00000318024 CKS1BP61024 79 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms