RNA–Protein interactions for RNA: ENST00000317221.11

ZNF559-201, Transcript of zinc finger protein 559, humanhuman

TSL 2 BASIC

Gene ZNF559, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559-201ENST00000317221 J3QQQ9 107 aa4.35□□□□□ -1.71
ZNF559-201ENST00000317221 LINC00694P0DN24 101 aa4.35□□□□□ -1.71
ZNF559-201ENST00000317221 PMVKQ15126 192 aa4.35□□□□□ -1.71
ZNF559-201ENST00000317221 C2orf82Q6UX34 121 aa4.35□□□□□ -1.71
ZNF559-201ENST00000317221 UBE2WQ96B02 151 aa4.35□□□□□ -1.71
ZNF559-201ENST00000317221 LINC01587Q99440 93 aa4.35□□□□□ -1.71
ZNF559-201ENST00000317221 CSMD2Q7Z408 3487 aa4.35□□□□□ -1.71
ZNF559-201ENST00000317221 IGHV3-66A0A0C4DH42 116 aa4.35□□□□□ -1.71
ZNF559-201ENST00000317221 PRB1P04280 392 aa4.35□□□□□ -1.71
ZNF559-201ENST00000317221 LGALS3P17931 250 aaKnown RBP4.35□□□□□ -1.71
ZNF559-201ENST00000317221 CDSNQ15517 529 aa4.35□□□□□ -1.71
ZNF559-201ENST00000317221 ADIPOQQ15848 244 aa4.35□□□□□ -1.71
ZNF559-201ENST00000317221 ZNRF2Q8NHG8 242 aa4.35□□□□□ -1.71
ZNF559-201ENST00000317221 LINC01600Q96MT4 127 aa4.35□□□□□ -1.71
ZNF559-201ENST00000317221 AMELXQ99217 191 aa4.35□□□□□ -1.71
ZNF559-201ENST00000317221 CENPEQ02224 2701 aa4.35□□□□□ -1.71
ZNF559-201ENST00000317221 SVEP1Q4LDE5 3571 aa4.35□□□□□ -1.71
ZNF559-201ENST00000317221 USP9XQ93008 2570 aaPredicted RBP4.34□□□□□ -1.71
ZNF559-201ENST00000317221 IGHV3OR16-13A0A075B7E8 117 aa4.34□□□□□ -1.71
ZNF559-201ENST00000317221 IGHV3-74A0A0B4J1X5 117 aa4.34□□□□□ -1.71
ZNF559-201ENST00000317221 MBD3L4A6NDZ8 208 aaPredicted RBP4.34□□□□□ -1.71
ZNF559-201ENST00000317221 MBD3L3A6NE82 208 aaPredicted RBP4.34□□□□□ -1.71
ZNF559-201ENST00000317221 MBD3L5A6NJ08 208 aaPredicted RBP4.34□□□□□ -1.71
ZNF559-201ENST00000317221 IGIPA6NJ69 53 aa4.34□□□□□ -1.71
ZNF559-201ENST00000317221 RNF223E7ERA6 249 aa4.34□□□□□ -1.71
ZNF559-201ENST00000317221 H7C423 109 aa4.34□□□□□ -1.71
ZNF559-201ENST00000317221 NBR2O15453 112 aa4.34□□□□□ -1.71
ZNF559-201ENST00000317221 BUB3O43684 328 aa4.34□□□□□ -1.71
ZNF559-201ENST00000317221 ATP5J2P56134 94 aa4.34□□□□□ -1.71
ZNF559-201ENST00000317221 MRPL23Q16540 153 aaKnown RBP4.34□□□□□ -1.71
ZNF559-201ENST00000317221 GPHB5Q86YW7 130 aa4.34□□□□□ -1.71
ZNF559-201ENST00000317221 MBD3L2Q8NHZ7 208 aaPredicted RBP4.34□□□□□ -1.71
ZNF559-201ENST00000317221 NRGNQ92686 78 aa4.34□□□□□ -1.71
ZNF559-201ENST00000317221 DPH3P1Q9H4G8 78 aa4.34□□□□□ -1.71
ZNF559-201ENST00000317221 KAAG1Q9UBP8 84 aa4.34□□□□□ -1.71
ZNF559-201ENST00000317221 TRGV11A0A075B6L2 103 aa4.34□□□□□ -1.72
ZNF559-201ENST00000317221 A0A0B4J2C4 111 aa4.34□□□□□ -1.72
ZNF559-201ENST00000317221 TRBV30A0A0K0K1B3 111 aa4.34□□□□□ -1.72
ZNF559-201ENST00000317221 J3KRW8 73 aa4.34□□□□□ -1.72
ZNF559-201ENST00000317221 MGPP08493 103 aa4.34□□□□□ -1.72
ZNF559-201ENST00000317221 RPL39P62891 51 aaKnown RBP4.34□□□□□ -1.72
ZNF559-201ENST00000317221 IGFBPL1Q8WX77 278 aa4.34□□□□□ -1.72
ZNF559-201ENST00000317221 TP53TG1Q9Y2A0 90 aa4.34□□□□□ -1.72
ZNF559-201ENST00000317221 FAM208BQ5VWN6 2430 aa4.34□□□□□ -1.72
ZNF559-201ENST00000317221 SPG11Q96JI7 2443 aa4.33□□□□□ -1.72
ZNF559-201ENST00000317221 LOC107984640A0A0U1RRK4 108 aa4.33□□□□□ -1.72
ZNF559-201ENST00000317221 LY6LH3BQJ8 138 aa4.33□□□□□ -1.72
ZNF559-201ENST00000317221 IGF1P05019 195 aa4.33□□□□□ -1.72
ZNF559-201ENST00000317221 S100A4P26447 101 aaKnown RBP4.33□□□□□ -1.72
ZNF559-201ENST00000317221 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.33□□□□□ -1.72
ZNF559-201ENST00000317221 NUP37Q8NFH4 326 aa4.33□□□□□ -1.72
ZNF559-201ENST00000317221 PHLDA3Q9Y5J5 127 aa4.33□□□□□ -1.72
ZNF559-201ENST00000317221 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.33□□□□□ -1.72
ZNF559-201ENST00000317221 M0R2P5 195 aa4.33□□□□□ -1.72
ZNF559-201ENST00000317221 TRIAP1O43715 76 aa4.33□□□□□ -1.72
ZNF559-201ENST00000317221 ZNF22P17026 224 aaPredicted RBP4.33□□□□□ -1.72
ZNF559-201ENST00000317221 HES1Q14469 280 aa4.33□□□□□ -1.72
ZNF559-201ENST00000317221 C9orf47Q6ZRZ4 202 aa4.33□□□□□ -1.72
ZNF559-201ENST00000317221 DNAJC30Q96LL9 226 aa4.33□□□□□ -1.72
ZNF559-201ENST00000317221 CSDC2Q9Y534 153 aaKnown RBP4.33□□□□□ -1.72
ZNF559-201ENST00000317221 MED13LQ71F56 2210 aa4.33□□□□□ -1.72
ZNF559-201ENST00000317221 HRNRQ86YZ3 2850 aaPredicted RBP4.32□□□□□ -1.72
ZNF559-201ENST00000317221 IGHV1-69DA0A0B4J2H0 117 aa4.32□□□□□ -1.72
ZNF559-201ENST00000317221 A0A0G2JNJ9 132 aa4.32□□□□□ -1.72
ZNF559-201ENST00000317221 TRBV7-7A0A0K0K1E9 115 aa4.32□□□□□ -1.72
ZNF559-201ENST00000317221 OOSP1A8MZH6 123 aa4.32□□□□□ -1.72
ZNF559-201ENST00000317221 PPP1R17O96001 155 aa4.32□□□□□ -1.72
ZNF559-201ENST00000317221 PRSS2P07478 247 aa4.32□□□□□ -1.72
ZNF559-201ENST00000317221 GRNP28799 593 aaKnown RBP4.32□□□□□ -1.72
ZNF559-201ENST00000317221 EBI3Q14213 229 aa4.32□□□□□ -1.72
ZNF559-201ENST00000317221 ZNF876PQ49A33 203 aa4.32□□□□□ -1.72
ZNF559-201ENST00000317221 NPBQ8NG41 125 aa4.32□□□□□ -1.72
ZNF559-201ENST00000317221 TMEM141Q96I45 108 aa4.32□□□□□ -1.72
ZNF559-201ENST00000317221 Q9UFV3 132 aa4.32□□□□□ -1.72
ZNF559-201ENST00000317221 LRRK2Q5S007 2527 aa4.32□□□□□ -1.72
ZNF559-201ENST00000317221 ANKHD1Q8IWZ3 2542 aaKnown RBP4.32□□□□□ -1.72
ZNF559-201ENST00000317221 IGHV3-64A0A075B6Q5 118 aa4.32□□□□□ -1.72
ZNF559-201ENST00000317221 IGHV3-49A0A0A0MS15 119 aa4.32□□□□□ -1.72
ZNF559-201ENST00000317221 C5orf47Q569G3 176 aa4.32□□□□□ -1.72
ZNF559-201ENST00000317221 PRR9Q5T870 116 aa4.32□□□□□ -1.72
ZNF559-201ENST00000317221 BBC3Q96PG8 261 aaPredicted RBP4.32□□□□□ -1.72
ZNF559-201ENST00000317221 PRORYQ9H606 182 aa4.32□□□□□ -1.72
ZNF559-201ENST00000317221 FAM236AA0A1B0GUQ0 79 aa4.31□□□□□ -1.72
ZNF559-201ENST00000317221 FAM236BA0A1B0GV22 79 aa4.31□□□□□ -1.72
ZNF559-201ENST00000317221 FAM240AA0A1B0GVK7 77 aa4.31□□□□□ -1.72
ZNF559-201ENST00000317221 COX6CP09669 75 aa4.31□□□□□ -1.72
ZNF559-201ENST00000317221 UBE2E1P51965 193 aa4.31□□□□□ -1.72
ZNF559-201ENST00000317221 C9orf153Q5TBE3 101 aa4.31□□□□□ -1.72
ZNF559-201ENST00000317221 CEMP1Q6PRD7 247 aaPredicted RBP4.31□□□□□ -1.72
ZNF559-201ENST00000317221 TMEM101Q96IK0 257 aa4.31□□□□□ -1.72
ZNF559-201ENST00000317221 VPS13CQ709C8 3753 aa4.31□□□□□ -1.72
ZNF559-201ENST00000317221 TMEM223A0PJW6 202 aa4.31□□□□□ -1.72
ZNF559-201ENST00000317221 VCYO14598 125 aa4.31□□□□□ -1.72
ZNF559-201ENST00000317221 NPFFO15130 113 aa4.31□□□□□ -1.72
ZNF559-201ENST00000317221 LEPROTO15243 131 aa4.31□□□□□ -1.72
ZNF559-201ENST00000317221 GNRH2O43555 120 aa4.31□□□□□ -1.72
ZNF559-201ENST00000317221 NDUFA7O95182 113 aa4.31□□□□□ -1.72
ZNF559-201ENST00000317221 CD3EP07766 207 aa4.31□□□□□ -1.72
ZNF559-201ENST00000317221 POLR2KP53803 58 aaKnown RBP4.31□□□□□ -1.72
ZNF559-201ENST00000317221 NDPQ00604 133 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms