RNA–Protein interactions for RNA: ENST00000317173.8

MSRA-201, Transcript of methionine sulfoxide reductase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRA, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-201ENST00000317173 RHODO00212 210 aa10.08□□□□□ -0.8
MSRA-201ENST00000317173 CIDEAO60543 219 aa10.08□□□□□ -0.8
MSRA-201ENST00000317173 POM121L12Q8N7R1 296 aa10.08□□□□□ -0.8
MSRA-201ENST00000317173 Q8NAQ8 132 aa10.08□□□□□ -0.8
MSRA-201ENST00000317173 RNF185Q96GF1 192 aa10.08□□□□□ -0.8
MSRA-201ENST00000317173 MRPL16Q9NX20 251 aaKnown RBP10.08□□□□□ -0.8
MSRA-201ENST00000317173 TRGV1A0A0A0MS02 117 aa10.07□□□□□ -0.8
MSRA-201ENST00000317173 LYRM9A8MSI8 78 aa10.07□□□□□ -0.8
MSRA-201ENST00000317173 CRYGDP07320 174 aa10.07□□□□□ -0.8
MSRA-201ENST00000317173 MRPL51Q4U2R6 128 aaKnown RBP10.07□□□□□ -0.8
MSRA-201ENST00000317173 MRAP2Q96G30 205 aa10.07□□□□□ -0.8
MSRA-201ENST00000317173 SPATA25Q9BR10 227 aa10.07□□□□□ -0.8
MSRA-201ENST00000317173 NACAE9PAV3 2078 aa10.07□□□□□ -0.8
MSRA-201ENST00000317173 IGHV4-28A0A0C4DH34 117 aa10.07□□□□□ -0.8
MSRA-201ENST00000317173 RS1O15537 224 aa10.07□□□□□ -0.8
MSRA-201ENST00000317173 ORMDL3Q8N138 153 aa10.07□□□□□ -0.8
MSRA-201ENST00000317173 LINC00612Q8N6U2 182 aa10.07□□□□□ -0.8
MSRA-201ENST00000317173 C18orf15Q96N68 181 aa10.07□□□□□ -0.8
MSRA-201ENST00000317173 TM2D3Q9BRN9 247 aa10.07□□□□□ -0.8
MSRA-201ENST00000317173 LAMTOR2Q9Y2Q5 125 aa10.07□□□□□ -0.8
MSRA-201ENST00000317173 TRAV4A0A0B4J268 109 aa10.06□□□□□ -0.8
MSRA-201ENST00000317173 TEX48A0A1B0GUV7 120 aa10.06□□□□□ -0.8
MSRA-201ENST00000317173 LINC00315P59091 139 aa10.06□□□□□ -0.8
MSRA-201ENST00000317173 KIAA1644Q3SXP7 199 aa10.06□□□□□ -0.8
MSRA-201ENST00000317173 CFAP126Q5VTH2 177 aa10.06□□□□□ -0.8
MSRA-201ENST00000317173 ZFP2Q6ZN57 461 aa10.06□□□□□ -0.8
MSRA-201ENST00000317173 Q6ZTI0 123 aa10.06□□□□□ -0.8
MSRA-201ENST00000317173 ALKBH7Q9BT30 221 aaPredicted RBP10.06□□□□□ -0.8
MSRA-201ENST00000317173 JPT2Q9H910 190 aa10.06□□□□□ -0.8
MSRA-201ENST00000317173 STAB2Q8WWQ8 2551 aa10.06□□□□□ -0.8
MSRA-201ENST00000317173 A0A087WWL8 130 aa10.05□□□□□ -0.8
MSRA-201ENST00000317173 HIST1H2BKO60814 126 aa10.05□□□□□ -0.8
MSRA-201ENST00000317173 PPP1R17O96001 155 aa10.05□□□□□ -0.8
MSRA-201ENST00000317173 HIST1H2BJP06899 126 aa10.05□□□□□ -0.8
MSRA-201ENST00000317173 MGPP08493 103 aa10.05□□□□□ -0.8
MSRA-201ENST00000317173 HIST1H2BOP23527 126 aa10.05□□□□□ -0.8
MSRA-201ENST00000317173 SRIP30626 198 aa10.05□□□□□ -0.8
MSRA-201ENST00000317173 CKS2P33552 79 aa10.05□□□□□ -0.8
MSRA-201ENST00000317173 HIST1H2BBP33778 126 aa10.05□□□□□ -0.8
MSRA-201ENST00000317173 HIST1H2BDP58876 126 aa10.05□□□□□ -0.8
MSRA-201ENST00000317173 HIST1H2BCP62807 126 aa10.05□□□□□ -0.8
MSRA-201ENST00000317173 HIST2H2BEQ16778 126 aa10.05□□□□□ -0.8
MSRA-201ENST00000317173 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.05□□□□□ -0.8
MSRA-201ENST00000317173 HIST1H2BHQ93079 126 aa10.05□□□□□ -0.8
MSRA-201ENST00000317173 HIST1H2BNQ99877 126 aa10.05□□□□□ -0.8
MSRA-201ENST00000317173 HIST1H2BMQ99879 126 aa10.05□□□□□ -0.8
MSRA-201ENST00000317173 TENM3Q9P273 2699 aa10.04□□□□□ -0.8
MSRA-201ENST00000317173 D6R8Y8 96 aa10.04□□□□□ -0.8
MSRA-201ENST00000317173 EMP1P54849 157 aa10.04□□□□□ -0.8
MSRA-201ENST00000317173 OR10J3Q5JRS4 329 aa10.04□□□□□ -0.8
MSRA-201ENST00000317173 FAM74A4Q5TZK3 123 aa10.04□□□□□ -0.8
MSRA-201ENST00000317173 UFSP1Q6NVU6 142 aa10.04□□□□□ -0.8
MSRA-201ENST00000317173 OR4C5Q8NGB2 326 aa10.04□□□□□ -0.8
MSRA-201ENST00000317173 SAMD10Q9BYL1 202 aa10.04□□□□□ -0.8
MSRA-201ENST00000317173 C11orf68Q9H3H3 251 aaKnown RBP10.04□□□□□ -0.8
MSRA-201ENST00000317173 EDA2RQ9HAV5 297 aa10.04□□□□□ -0.8
MSRA-201ENST00000317173 TRGV2A0A075B6R0 118 aa10.03□□□□□ -0.8
MSRA-201ENST00000317173 ZNF56Q15929 161 aa10.03□□□□□ -0.8
MSRA-201ENST00000317173 PRELID3AQ96N28 172 aa10.03□□□□□ -0.8
MSRA-201ENST00000317173 DKK2Q9UBU2 259 aa10.03□□□□□ -0.8
MSRA-201ENST00000317173 HUWE1Q7Z6Z7 4374 aaKnown RBP10.03□□□□□ -0.8
MSRA-201ENST00000317173 GAGE12BA1L429 117 aa10.02□□□□□ -0.8
MSRA-201ENST00000317173 F5H697 171 aa10.02□□□□□ -0.8
MSRA-201ENST00000317173 H7C1H1 209 aa10.02□□□□□ -0.8
MSRA-201ENST00000317173 GAGE7O76087 117 aa10.02□□□□□ -0.8
MSRA-201ENST00000317173 GAGE12FP0CL80 117 aa10.02□□□□□ -0.8
MSRA-201ENST00000317173 GAGE12GP0CL81 117 aa10.02□□□□□ -0.8
MSRA-201ENST00000317173 GAGE12IP0CL82 117 aa10.02□□□□□ -0.8
MSRA-201ENST00000317173 SPART-AS1P0CW21 52 aa10.02□□□□□ -0.8
MSRA-201ENST00000317173 Q0VG73 95 aa10.02□□□□□ -0.8
MSRA-201ENST00000317173 FAM222AQ5U5X8 452 aa10.02□□□□□ -0.8
MSRA-201ENST00000317173 RETNQ9HD89 108 aa10.02□□□□□ -0.8
MSRA-201ENST00000317173 TMA7Q9Y2S6 64 aaKnown RBP10.02□□□□□ -0.8
MSRA-201ENST00000317173 SUMO4Q6EEV6 95 aa10.02□□□□□ -0.81
MSRA-201ENST00000317173 IGHV3-53P01767 116 aa10.01□□□□□ -0.81
MSRA-201ENST00000317173 S100A6P06703 90 aa10.01□□□□□ -0.81
MSRA-201ENST00000317173 COA6Q5JTJ3 125 aaKnown RBP10.01□□□□□ -0.81
MSRA-201ENST00000317173 C18orf32Q8TCD1 76 aa10.01□□□□□ -0.81
MSRA-201ENST00000317173 TRAV26-2A0A0B4J265 109 aa10□□□□□ -0.81
MSRA-201ENST00000317173 PRSS47A8MTI9 375 aa10□□□□□ -0.81
MSRA-201ENST00000317173 TNFRSF6BO95407 300 aa10□□□□□ -0.81
MSRA-201ENST00000317173 NCR2O95944 276 aa10□□□□□ -0.81
MSRA-201ENST00000317173 NRACQ8N912 160 aa10□□□□□ -0.81
MSRA-201ENST00000317173 SMKR1H3BMG3 65 aa9.99□□□□□ -0.81
MSRA-201ENST00000317173 C3orf84H3BNL1 204 aa9.99□□□□□ -0.81
MSRA-201ENST00000317173 M0QY20 66 aa9.99□□□□□ -0.81
MSRA-201ENST00000317173 DEFB4AO15263 64 aa9.99□□□□□ -0.81
MSRA-201ENST00000317173 NPYP01303 97 aa9.99□□□□□ -0.81
MSRA-201ENST00000317173 DEFB130BP0DP73 79 aa9.99□□□□□ -0.81
MSRA-201ENST00000317173 DEFB130AP0DP74 79 aa9.99□□□□□ -0.81
MSRA-201ENST00000317173 ZNF479Q96JC4 524 aa9.99□□□□□ -0.81
MSRA-201ENST00000317173 C20orf78Q9BR46 151 aa9.99□□□□□ -0.81
MSRA-201ENST00000317173 MAP1LC3AQ9H492 121 aa9.99□□□□□ -0.81
MSRA-201ENST00000317173 TRBV6-5A0A0K0K1A5 114 aa9.98□□□□□ -0.81
MSRA-201ENST00000317173 DAD1P61803 113 aa9.98□□□□□ -0.81
MSRA-201ENST00000317173 IGHV3-73A0A0B4J1V6 119 aa9.97□□□□□ -0.81
MSRA-201ENST00000317173 TRBV10-1A0A0K0K1A3 114 aa9.97□□□□□ -0.81
MSRA-201ENST00000317173 GAS8-AS1O95177 125 aa9.97□□□□□ -0.81
MSRA-201ENST00000317173 NDUFA6P56556 154 aa9.97□□□□□ -0.81
MSRA-201ENST00000317173 BAGE3Q86Y29 109 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms