RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 EPDR1Q9UM22 224 aa5.47□□□□□ -1.53
TPM3-203ENST00000312970 TNFSF18Q9UNG2 199 aa5.47□□□□□ -1.53
TPM3-203ENST00000312970 PAM16Q9Y3D7 125 aa5.47□□□□□ -1.53
TPM3-203ENST00000312970 ALG5Q9Y673 324 aa5.47□□□□□ -1.53
TPM3-203ENST00000312970 IGHV3-73A0A0B4J1V6 119 aa5.46□□□□□ -1.54
TPM3-203ENST00000312970 KRTAP23-1A1A580 65 aa5.46□□□□□ -1.54
TPM3-203ENST00000312970 LRCOL1A6NCL2 159 aa5.46□□□□□ -1.54
TPM3-203ENST00000312970 CXorf1O96002 111 aa5.46□□□□□ -1.54
TPM3-203ENST00000312970 IGLV2-11P01706 119 aa5.46□□□□□ -1.54
TPM3-203ENST00000312970 MGST1P10620 155 aaKnown RBP5.46□□□□□ -1.54
TPM3-203ENST00000312970 ATP6V0CP27449 155 aa5.46□□□□□ -1.54
TPM3-203ENST00000312970 LELP1Q5T871 98 aa5.46□□□□□ -1.54
TPM3-203ENST00000312970 PRNTQ86SH4 94 aa5.46□□□□□ -1.54
TPM3-203ENST00000312970 ATP6V0E2Q8NHE4 81 aa5.46□□□□□ -1.54
TPM3-203ENST00000312970 C9orf85Q96MD7 179 aa5.46□□□□□ -1.54
TPM3-203ENST00000312970 AQP10Q96PS8 301 aa5.46□□□□□ -1.54
TPM3-203ENST00000312970 ACTR3CQ9C0K3 210 aaPredicted RBP5.46□□□□□ -1.54
TPM3-203ENST00000312970 GTSF1LQ9H1H1 148 aa5.46□□□□□ -1.54
TPM3-203ENST00000312970 MED28Q9H204 178 aa5.46□□□□□ -1.54
TPM3-203ENST00000312970 SH3BGRL3Q9H299 93 aa5.46□□□□□ -1.54
TPM3-203ENST00000312970 IGLV5-52A0A0A0MRZ9 124 aa5.45□□□□□ -1.54
TPM3-203ENST00000312970 A0A1W2PRE2 83 aa5.45□□□□□ -1.54
TPM3-203ENST00000312970 FABP5P3A8MUU1 101 aa5.45□□□□□ -1.54
TPM3-203ENST00000312970 IGHV3-30P01768 117 aa5.45□□□□□ -1.54
TPM3-203ENST00000312970 IGHV3-33P01772 117 aa5.45□□□□□ -1.54
TPM3-203ENST00000312970 IGHV3-30-3P0DP02 117 aa5.45□□□□□ -1.54
TPM3-203ENST00000312970 IGHV3-30-5P0DP03 117 aa5.45□□□□□ -1.54
TPM3-203ENST00000312970 PNRC1Q12796 327 aaPredicted RBP5.45□□□□□ -1.54
TPM3-203ENST00000312970 ZNF506Q5JVG8 444 aa5.45□□□□□ -1.54
TPM3-203ENST00000312970 Q5VSD8 79 aa5.45□□□□□ -1.54
TPM3-203ENST00000312970 Q6ZNX1 250 aa5.45□□□□□ -1.54
TPM3-203ENST00000312970 CYB561D1Q8N8Q1 229 aa5.45□□□□□ -1.54
TPM3-203ENST00000312970 TMEM75Q8N9X5 138 aa5.45□□□□□ -1.54
TPM3-203ENST00000312970 NTN5Q8WTR8 489 aaPredicted RBP5.45□□□□□ -1.54
TPM3-203ENST00000312970 A8MWV9 139 aa5.44□□□□□ -1.54
TPM3-203ENST00000312970 GGTLC3B5MD39 225 aa5.44□□□□□ -1.54
TPM3-203ENST00000312970 SMR3BP02814 79 aaPredicted RBP5.44□□□□□ -1.54
TPM3-203ENST00000312970 RNASE3P12724 160 aaKnown RBP5.44□□□□□ -1.54
TPM3-203ENST00000312970 S100A4P26447 101 aaKnown RBP5.44□□□□□ -1.54
TPM3-203ENST00000312970 PIK3CD-AS1Q5SR53 167 aa5.44□□□□□ -1.54
TPM3-203ENST00000312970 ZFP2Q6ZN57 461 aa5.44□□□□□ -1.54
TPM3-203ENST00000312970 INO80EQ8NBZ0 244 aaPredicted RBP5.44□□□□□ -1.54
TPM3-203ENST00000312970 LINC00479Q96M42 142 aa5.44□□□□□ -1.54
TPM3-203ENST00000312970 TMEM70Q9BUB7 260 aa5.44□□□□□ -1.54
TPM3-203ENST00000312970 Q9HAA7 133 aa5.44□□□□□ -1.54
TPM3-203ENST00000312970 BORCS7-ASMTA0A0B4J1R7 106 aa5.43□□□□□ -1.54
TPM3-203ENST00000312970 IGKV3D-20A0A0C4DH25 116 aa5.43□□□□□ -1.54
TPM3-203ENST00000312970 IFNA7P01567 189 aa5.43□□□□□ -1.54
TPM3-203ENST00000312970 ASIPP42127 132 aa5.43□□□□□ -1.54
TPM3-203ENST00000312970 FGF8P55075 233 aaPredicted RBP5.43□□□□□ -1.54
TPM3-203ENST00000312970 LAGE3Q14657 143 aa5.43□□□□□ -1.54
TPM3-203ENST00000312970 LGALSLQ3ZCW2 172 aaPredicted RBP5.43□□□□□ -1.54
TPM3-203ENST00000312970 Q5BKY6 102 aa5.43□□□□□ -1.54
TPM3-203ENST00000312970 Q6ZSN1 163 aa5.43□□□□□ -1.54
TPM3-203ENST00000312970 Q8N814 137 aa5.43□□□□□ -1.54
TPM3-203ENST00000312970 NKX6-2Q9C056 277 aaPredicted RBP5.43□□□□□ -1.54
TPM3-203ENST00000312970 BATF3Q9NR55 127 aa5.43□□□□□ -1.54
TPM3-203ENST00000312970 A0A087WWC5 75 aa5.42□□□□□ -1.54
TPM3-203ENST00000312970 GAGE12JA6NER3 117 aa5.42□□□□□ -1.54
TPM3-203ENST00000312970 PTTG1O95997 202 aa5.42□□□□□ -1.54
TPM3-203ENST00000312970 GIPP09681 153 aaPredicted RBP5.42□□□□□ -1.54
TPM3-203ENST00000312970 GAGE1Q13065 139 aa5.42□□□□□ -1.54
TPM3-203ENST00000312970 GAGE4Q13068 117 aa5.42□□□□□ -1.54
TPM3-203ENST00000312970 GAGE5Q13069 117 aa5.42□□□□□ -1.54
TPM3-203ENST00000312970 RPL7L1Q6DKI1 246 aaKnown RBP5.42□□□□□ -1.54
TPM3-203ENST00000312970 OR2T35Q8NGX2 323 aa5.42□□□□□ -1.54
TPM3-203ENST00000312970 ALKBH7Q9BT30 221 aaPredicted RBP5.42□□□□□ -1.54
TPM3-203ENST00000312970 PARLQ9H300 379 aa5.42□□□□□ -1.54
TPM3-203ENST00000312970 IL36BQ9NZH7 164 aa5.42□□□□□ -1.54
TPM3-203ENST00000312970 ARL2-SNX15V9GYD0 113 aa5.42□□□□□ -1.54
TPM3-203ENST00000312970 TRAV8-3A0A0A6YYJ7 113 aa5.41□□□□□ -1.54
TPM3-203ENST00000312970 CTXND1A0A1B0GTU2 59 aa5.41□□□□□ -1.54
TPM3-203ENST00000312970 B4DEV8 164 aa5.41□□□□□ -1.54
TPM3-203ENST00000312970 PEX7O00628 323 aa5.41□□□□□ -1.54
TPM3-203ENST00000312970 C1QBP02746 253 aa5.41□□□□□ -1.54
TPM3-203ENST00000312970 UBE2G2P60604 165 aa5.41□□□□□ -1.54
TPM3-203ENST00000312970 ZNF726P1Q15940 193 aa5.41□□□□□ -1.54
TPM3-203ENST00000312970 DNLZQ5SXM8 178 aa5.41□□□□□ -1.54
TPM3-203ENST00000312970 UFSP1Q6NVU6 142 aa5.41□□□□□ -1.54
TPM3-203ENST00000312970 SYT8Q8NBV8 401 aa5.41□□□□□ -1.54
TPM3-203ENST00000312970 HIST1H2BAQ96A08 127 aa5.41□□□□□ -1.54
TPM3-203ENST00000312970 JPT2Q9H910 190 aa5.41□□□□□ -1.54
TPM3-203ENST00000312970 ZFP30Q9Y2G7 519 aa5.41□□□□□ -1.54
TPM3-203ENST00000312970 LRP1Q07954 4544 aaKnown RBP5.4□□□□□ -1.54
TPM3-203ENST00000312970 FXYD6-FXYD2A0A087WZ82 144 aa5.4□□□□□ -1.54
TPM3-203ENST00000312970 RNF222A6NCQ9 220 aa5.4□□□□□ -1.54
TPM3-203ENST00000312970 FAM74A7A6NL05 159 aa5.4□□□□□ -1.54
TPM3-203ENST00000312970 KRBOX1C9JBD0 128 aa5.4□□□□□ -1.54
TPM3-203ENST00000312970 ARMS2P0C7Q2 107 aa5.4□□□□□ -1.54
TPM3-203ENST00000312970 LINC00694P0DN24 101 aa5.4□□□□□ -1.54
TPM3-203ENST00000312970 CRIP1P50238 77 aa5.4□□□□□ -1.54
TPM3-203ENST00000312970 HAMPP81172 84 aa5.4□□□□□ -1.54
TPM3-203ENST00000312970 AKR1C8PQ5T2L2 129 aa5.4□□□□□ -1.54
TPM3-203ENST00000312970 COX8CQ7Z4L0 72 aa5.4□□□□□ -1.54
TPM3-203ENST00000312970 DAZ4Q86SG3 579 aaKnown RBP5.4□□□□□ -1.54
TPM3-203ENST00000312970 C14orf178Q8N769 122 aaPredicted RBP5.4□□□□□ -1.54
TPM3-203ENST00000312970 FMC1Q96HJ9 113 aa5.4□□□□□ -1.54
TPM3-203ENST00000312970 SAMD10Q9BYL1 202 aa5.4□□□□□ -1.54
TPM3-203ENST00000312970 DAZ3Q9NR90 486 aaKnown RBP5.4□□□□□ -1.54
TPM3-203ENST00000312970 Q9UF83 564 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms