RNA–Protein interactions for RNA: ENST00000311034.6

NPAS4-201, Transcript of neuronal PAS domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS4, Length 3,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-201ENST00000311034 C10orf99Q6UWK7 81 aa10.32□□□□□ -0.76
NPAS4-201ENST00000311034 BAALCQ8WXS3 180 aa10.32□□□□□ -0.76
NPAS4-201ENST00000311034 ZNF48Q96MX3 618 aaPredicted RBP10.32□□□□□ -0.76
NPAS4-201ENST00000311034 OPRPNQ99935 248 aaPredicted RBP10.32□□□□□ -0.76
NPAS4-201ENST00000311034 TMEM238LA0A1B0GVL6 79 aa10.32□□□□□ -0.76
NPAS4-201ENST00000311034 A6NJY4 79 aa10.32□□□□□ -0.76
NPAS4-201ENST00000311034 ODF3BA8MYP8 253 aa10.32□□□□□ -0.76
NPAS4-201ENST00000311034 SPINK8P0C7L1 97 aa10.32□□□□□ -0.76
NPAS4-201ENST00000311034 TAL2Q16559 108 aa10.32□□□□□ -0.76
NPAS4-201ENST00000311034 MORN3Q6PF18 240 aaPredicted RBP10.32□□□□□ -0.76
NPAS4-201ENST00000311034 RASL10AQ92737 203 aa10.32□□□□□ -0.76
NPAS4-201ENST00000311034 RAX2Q96IS3 184 aa10.32□□□□□ -0.76
NPAS4-201ENST00000311034 CLPSL1A2RUU4 121 aa10.32□□□□□ -0.76
NPAS4-201ENST00000311034 ADORA2A-AS1P86434 159 aa10.32□□□□□ -0.76
NPAS4-201ENST00000311034 C1orf122Q6ZSJ8 110 aa10.32□□□□□ -0.76
NPAS4-201ENST00000311034 C20orf173Q96LM9 149 aa10.32□□□□□ -0.76
NPAS4-201ENST00000311034 M0R1W7 72 aa10.31□□□□□ -0.76
NPAS4-201ENST00000311034 FAM110DQ8TAY7 271 aaPredicted RBP10.31□□□□□ -0.76
NPAS4-201ENST00000311034 IGKV3OR2-268A0A0C4DH90 116 aa10.31□□□□□ -0.76
NPAS4-201ENST00000311034 K7ENP7 123 aa10.31□□□□□ -0.76
NPAS4-201ENST00000311034 IGHV4-38-2P0DP08 117 aa10.3□□□□□ -0.76
NPAS4-201ENST00000311034 RPL39P62891 51 aaKnown RBP10.3□□□□□ -0.76
NPAS4-201ENST00000311034 DPH3P1Q9H4G8 78 aa10.3□□□□□ -0.76
NPAS4-201ENST00000311034 TP53TG1Q9Y2A0 90 aa10.3□□□□□ -0.76
NPAS4-201ENST00000311034 TRAV41A0A0B4J266 112 aa10.3□□□□□ -0.76
NPAS4-201ENST00000311034 SRSF2Q01130 221 aaKnown RBP10.3□□□□□ -0.76
NPAS4-201ENST00000311034 MRAP2Q96G30 205 aa10.3□□□□□ -0.76
NPAS4-201ENST00000311034 TRAV26-1A0A087WT03 109 aa10.3□□□□□ -0.76
NPAS4-201ENST00000311034 MT-ATP8P03928 68 aa10.3□□□□□ -0.76
NPAS4-201ENST00000311034 FOXI1Q12951 378 aa10.3□□□□□ -0.76
NPAS4-201ENST00000311034 FAM159AQ6UWV7 190 aa10.3□□□□□ -0.76
NPAS4-201ENST00000311034 RBAKDNA6NC62 111 aa10.29□□□□□ -0.76
NPAS4-201ENST00000311034 TSPAN13O95857 204 aa10.29□□□□□ -0.76
NPAS4-201ENST00000311034 GEMIN7Q9H840 131 aaKnown RBP10.29□□□□□ -0.76
NPAS4-201ENST00000311034 HECTD1Q9ULT8 2610 aa10.29□□□□□ -0.76
NPAS4-201ENST00000311034 LINC01546A6NGU7 62 aa10.29□□□□□ -0.76
NPAS4-201ENST00000311034 NEXN-AS1Q8NBZ9 246 aa10.29□□□□□ -0.76
NPAS4-201ENST00000311034 TOMM6Q96B49 74 aa10.29□□□□□ -0.76
NPAS4-201ENST00000311034 C11orf86A6NJI1 115 aa10.28□□□□□ -0.76
NPAS4-201ENST00000311034 RHPN1-AS1Q9BWJ2 59 aa10.28□□□□□ -0.76
NPAS4-201ENST00000311034 C1QTNF4Q9BXJ3 329 aa10.28□□□□□ -0.76
NPAS4-201ENST00000311034 TRAV21A0A0B4J279 112 aa10.28□□□□□ -0.76
NPAS4-201ENST00000311034 C19orf84I3L1E1 186 aa10.28□□□□□ -0.76
NPAS4-201ENST00000311034 NPFFO15130 113 aa10.28□□□□□ -0.76
NPAS4-201ENST00000311034 HERVK_113P61574 105 aa10.28□□□□□ -0.76
NPAS4-201ENST00000311034 SPINK13Q1W4C9 94 aa10.28□□□□□ -0.76
NPAS4-201ENST00000311034 IGF2-ASQ6U949 168 aa10.28□□□□□ -0.76
NPAS4-201ENST00000311034 NFE4Q86UQ8 179 aa10.28□□□□□ -0.76
NPAS4-201ENST00000311034 SPATA25Q9BR10 227 aa10.28□□□□□ -0.76
NPAS4-201ENST00000311034 PRO0461Q9UI25 63 aa10.28□□□□□ -0.76
NPAS4-201ENST00000311034 NIPBLQ6KC79 2804 aaeCLIP10.28□□□□□ -0.76
NPAS4-201ENST00000311034 A0A1W2PRX2 142 aa10.27□□□□□ -0.76
NPAS4-201ENST00000311034 KLRB1Q12918 225 aa10.27□□□□□ -0.76
NPAS4-201ENST00000311034 KIR2DL4Q99706 377 aa10.27□□□□□ -0.76
NPAS4-201ENST00000311034 DEFB136Q30KP8 78 aa10.27□□□□□ -0.77
NPAS4-201ENST00000311034 Q8N6K4 173 aa10.27□□□□□ -0.77
NPAS4-201ENST00000311034 TRAV12-1A0A0B4J245 112 aa10.27□□□□□ -0.77
NPAS4-201ENST00000311034 SMCPP49901 116 aaPredicted RBP10.27□□□□□ -0.77
NPAS4-201ENST00000311034 SCGB1A1P11684 91 aa10.26□□□□□ -0.77
NPAS4-201ENST00000311034 C9orf47Q6ZRZ4 202 aa10.26□□□□□ -0.77
NPAS4-201ENST00000311034 ZNF625Q96I27 306 aaPredicted RBP10.26□□□□□ -0.77
NPAS4-201ENST00000311034 FLNBO75369 2602 aaKnown RBP10.26□□□□□ -0.77
NPAS4-201ENST00000311034 TRAV2A0A0B4J234 112 aa10.26□□□□□ -0.77
NPAS4-201ENST00000311034 IGHV3-16A0A0C4DH30 117 aa10.26□□□□□ -0.77
NPAS4-201ENST00000311034 IGHV3-38A0A0C4DH36 116 aa10.25□□□□□ -0.77
NPAS4-201ENST00000311034 TCL1BO95988 128 aa10.25□□□□□ -0.77
NPAS4-201ENST00000311034 MINOS1Q5TGZ0 78 aa10.25□□□□□ -0.77
NPAS4-201ENST00000311034 CFAP126Q5VTH2 177 aa10.25□□□□□ -0.77
NPAS4-201ENST00000311034 MINOS1-NBL1R4GNA1 71 aa10.25□□□□□ -0.77
NPAS4-201ENST00000311034 IGHV4-61A0A0C4DH41 118 aa10.25□□□□□ -0.77
NPAS4-201ENST00000311034 LGALS3P17931 250 aaKnown RBP10.25□□□□□ -0.77
NPAS4-201ENST00000311034 SYNJ2BPP57105 145 aa10.25□□□□□ -0.77
NPAS4-201ENST00000311034 PSMG3-AS1Q96PY0 264 aa10.25□□□□□ -0.77
NPAS4-201ENST00000311034 C9orf139Q6ZV77 190 aa10.24□□□□□ -0.77
NPAS4-201ENST00000311034 CENPVL3A0A0U1RRI6 287 aa10.24□□□□□ -0.77
NPAS4-201ENST00000311034 CRYBA4P53673 196 aa10.24□□□□□ -0.77
NPAS4-201ENST00000311034 XGP55808 180 aa10.24□□□□□ -0.77
NPAS4-201ENST00000311034 ZFAND2AQ8N6M9 145 aa10.24□□□□□ -0.77
NPAS4-201ENST00000311034 TRBV7-1A0A0A6YYK4 115 aa10.23□□□□□ -0.77
NPAS4-201ENST00000311034 A8MWV9 139 aa10.23□□□□□ -0.77
NPAS4-201ENST00000311034 IGHV4-39P01824 125 aa10.23□□□□□ -0.77
NPAS4-201ENST00000311034 CEMP1Q6PRD7 247 aaPredicted RBP10.23□□□□□ -0.77
NPAS4-201ENST00000311034 C9JAW5 83 aa10.23□□□□□ -0.77
NPAS4-201ENST00000311034 SPXQ9BT56 116 aa10.23□□□□□ -0.77
NPAS4-201ENST00000311034 FHL3Q13643 280 aa10.22□□□□□ -0.77
NPAS4-201ENST00000311034 LYRM7Q5U5X0 104 aa10.22□□□□□ -0.77
NPAS4-201ENST00000311034 NDUFA11Q86Y39 141 aa10.22□□□□□ -0.77
NPAS4-201ENST00000311034 OOSP1A8MZH6 123 aa10.22□□□□□ -0.77
NPAS4-201ENST00000311034 TSPEAR-AS2P59090 65 aa10.22□□□□□ -0.77
NPAS4-201ENST00000311034 TRPT1Q86TN4 253 aaKnown RBP10.22□□□□□ -0.77
NPAS4-201ENST00000311034 IGHV3-53P01767 116 aa10.22□□□□□ -0.77
NPAS4-201ENST00000311034 PRB1P04280 392 aa10.22□□□□□ -0.77
NPAS4-201ENST00000311034 ANKRD29Q8N6D5 301 aa10.22□□□□□ -0.77
NPAS4-201ENST00000311034 CCL19Q99731 98 aa10.22□□□□□ -0.77
NPAS4-201ENST00000311034 CDIP1Q9H305 208 aa10.22□□□□□ -0.77
NPAS4-201ENST00000311034 GCN1Q92616 2671 aaKnown RBP10.21□□□□□ -0.77
NPAS4-201ENST00000311034 Q6ZUT4 128 aa10.21□□□□□ -0.77
NPAS4-201ENST00000311034 A0A0J9YY99 117 aa10.21□□□□□ -0.78
NPAS4-201ENST00000311034 SDHAF1A6NFY7 115 aa10.21□□□□□ -0.78
NPAS4-201ENST00000311034 P0DMU3 169 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms