RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 Q1RN00 199 aa13.74□□□□□ -0.21
SPSB4-201ENST00000310546 C14orf178Q8N769 122 aaPredicted RBP13.74□□□□□ -0.21
SPSB4-201ENST00000310546 CHD6Q8TD26 2715 aa13.74□□□□□ -0.21
SPSB4-201ENST00000310546 TRAV8-4A0A0B4J246 113 aa13.74□□□□□ -0.21
SPSB4-201ENST00000310546 MGPP08493 103 aa13.74□□□□□ -0.21
SPSB4-201ENST00000310546 IGLV11-55A0A075B6I3 123 aa13.74□□□□□ -0.21
SPSB4-201ENST00000310546 A4D1N5 150 aa13.74□□□□□ -0.21
SPSB4-201ENST00000310546 SLC25A29Q8N8R3 303 aa13.74□□□□□ -0.21
SPSB4-201ENST00000310546 TIMD4Q96H15 378 aa13.74□□□□□ -0.21
SPSB4-201ENST00000310546 ODF3Q96PU9 254 aa13.74□□□□□ -0.21
SPSB4-201ENST00000310546 NBR2O15453 112 aa13.73□□□□□ -0.21
SPSB4-201ENST00000310546 CRYGDP07320 174 aa13.73□□□□□ -0.21
SPSB4-201ENST00000310546 ELANEP08246 267 aa13.73□□□□□ -0.21
SPSB4-201ENST00000310546 CTSGP08311 255 aa13.73□□□□□ -0.21
SPSB4-201ENST00000310546 IGHV3-49A0A0A0MS15 119 aa13.72□□□□□ -0.21
SPSB4-201ENST00000310546 PRB1P04280 392 aa13.72□□□□□ -0.21
SPSB4-201ENST00000310546 TNFRSF18Q9Y5U5 241 aa13.71□□□□□ -0.21
SPSB4-201ENST00000310546 GNLYP22749 145 aa13.71□□□□□ -0.21
SPSB4-201ENST00000310546 IGLV4-69A0A075B6H9 119 aa13.7□□□□□ -0.22
SPSB4-201ENST00000310546 OR10J6PQ8NGY7 276 aa13.7□□□□□ -0.22
SPSB4-201ENST00000310546 IGHV3-33P01772 117 aa13.7□□□□□ -0.22
SPSB4-201ENST00000310546 PTPN13Q12923 2485 aa13.7□□□□□ -0.22
SPSB4-201ENST00000310546 TRAV2A0A0B4J234 112 aa13.7□□□□□ -0.22
SPSB4-201ENST00000310546 CD3EP07766 207 aa13.7□□□□□ -0.22
SPSB4-201ENST00000310546 Q6Q795 121 aa13.7□□□□□ -0.22
SPSB4-201ENST00000310546 CHCHD5Q9BSY4 110 aa13.7□□□□□ -0.22
SPSB4-201ENST00000310546 S100A4P26447 101 aaKnown RBP13.69□□□□□ -0.22
SPSB4-201ENST00000310546 LINC01620Q4KN68 170 aa13.69□□□□□ -0.22
SPSB4-201ENST00000310546 RNASE6Q93091 150 aaKnown RBP13.69□□□□□ -0.22
SPSB4-201ENST00000310546 RNF5Q99942 180 aa13.69□□□□□ -0.22
SPSB4-201ENST00000310546 TP53TG1Q9Y2A0 90 aa13.69□□□□□ -0.22
SPSB4-201ENST00000310546 IGHV4-4A0A075B6R2 117 aa13.68□□□□□ -0.22
SPSB4-201ENST00000310546 EIF4EBP3O60516 100 aaPredicted RBP13.68□□□□□ -0.22
SPSB4-201ENST00000310546 NDPQ00604 133 aa13.68□□□□□ -0.22
SPSB4-201ENST00000310546 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.68□□□□□ -0.22
SPSB4-201ENST00000310546 KAAG1Q9UBP8 84 aa13.68□□□□□ -0.22
SPSB4-201ENST00000310546 TSHBP01222 138 aa13.68□□□□□ -0.22
SPSB4-201ENST00000310546 RBAKDNA6NC62 111 aa13.67□□□□□ -0.22
SPSB4-201ENST00000310546 LGALS3P17931 250 aaKnown RBP13.67□□□□□ -0.22
SPSB4-201ENST00000310546 ATXN8Q156A1 80 aa13.67□□□□□ -0.22
SPSB4-201ENST00000310546 J3QQQ9 107 aa13.67□□□□□ -0.22
SPSB4-201ENST00000310546 RPL39P62891 51 aaKnown RBP13.67□□□□□ -0.22
SPSB4-201ENST00000310546 IGF1P05019 195 aa13.67□□□□□ -0.22
SPSB4-201ENST00000310546 PPDPFQ9H3Y8 114 aa13.67□□□□□ -0.22
SPSB4-201ENST00000310546 DPH3P1Q9H4G8 78 aa13.67□□□□□ -0.22
SPSB4-201ENST00000310546 IGHV3-64A0A075B6Q5 118 aa13.66□□□□□ -0.22
SPSB4-201ENST00000310546 BUB3O43684 328 aa13.66□□□□□ -0.22
SPSB4-201ENST00000310546 ZNF56Q15929 161 aa13.66□□□□□ -0.22
SPSB4-201ENST00000310546 PHLDA3Q9Y5J5 127 aa13.66□□□□□ -0.22
SPSB4-201ENST00000310546 DOPEY1Q5JWR5 2465 aa13.66□□□□□ -0.22
SPSB4-201ENST00000310546 H3BMM0 161 aa13.66□□□□□ -0.22
SPSB4-201ENST00000310546 PRR9Q5T870 116 aa13.66□□□□□ -0.22
SPSB4-201ENST00000310546 TMEM263Q8WUH6 116 aaKnown RBP13.66□□□□□ -0.22
SPSB4-201ENST00000310546 UBE2WQ96B02 151 aa13.66□□□□□ -0.22
SPSB4-201ENST00000310546 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.65□□□□□ -0.22
SPSB4-201ENST00000310546 RNF223E7ERA6 249 aa13.65□□□□□ -0.22
SPSB4-201ENST00000310546 PMVKQ15126 192 aa13.65□□□□□ -0.22
SPSB4-201ENST00000310546 PAPPA-AS1Q5QFB9 102 aa13.65□□□□□ -0.22
SPSB4-201ENST00000310546 ZANQ9Y493 2812 aa13.65□□□□□ -0.22
SPSB4-201ENST00000310546 M0QXV9 152 aa13.65□□□□□ -0.22
SPSB4-201ENST00000310546 ZNRF2Q8NHG8 242 aa13.65□□□□□ -0.22
SPSB4-201ENST00000310546 MUSTN1Q8IVN3 82 aa13.64□□□□□ -0.23
SPSB4-201ENST00000310546 LY6LH3BQJ8 138 aa13.64□□□□□ -0.23
SPSB4-201ENST00000310546 ID1P41134 155 aa13.64□□□□□ -0.23
SPSB4-201ENST00000310546 VPREB3Q9UKI3 123 aa13.64□□□□□ -0.23
SPSB4-201ENST00000310546 A0A1W2PPR1 153 aa13.63□□□□□ -0.23
SPSB4-201ENST00000310546 C2orf82Q6UX34 121 aa13.63□□□□□ -0.23
SPSB4-201ENST00000310546 LGALS9O00182 355 aa13.63□□□□□ -0.23
SPSB4-201ENST00000310546 AMELXQ99217 191 aa13.63□□□□□ -0.23
SPSB4-201ENST00000310546 C19orf84I3L1E1 186 aa13.62□□□□□ -0.23
SPSB4-201ENST00000310546 P0DMU3 169 aa13.62□□□□□ -0.23
SPSB4-201ENST00000310546 FAM231AP0DMU4 169 aa13.62□□□□□ -0.23
SPSB4-201ENST00000310546 FAM231CP0DMU5 169 aa13.62□□□□□ -0.23
SPSB4-201ENST00000310546 RPL13AP40429 203 aaKnown RBP13.62□□□□□ -0.23
SPSB4-201ENST00000310546 DUX3Q96PT4 197 aa13.62□□□□□ -0.23
SPSB4-201ENST00000310546 YAE1D1Q9NRH1 226 aa13.62□□□□□ -0.23
SPSB4-201ENST00000310546 MDFICQ9P1T7 246 aa13.62□□□□□ -0.23
SPSB4-201ENST00000310546 CUBNO60494 3623 aa13.62□□□□□ -0.23
SPSB4-201ENST00000310546 TRBV10-2A0A0K0K1G8 114 aa13.62□□□□□ -0.23
SPSB4-201ENST00000310546 IGIPA6NJ69 53 aa13.61□□□□□ -0.23
SPSB4-201ENST00000310546 TLN2Q9Y4G6 2542 aa13.61□□□□□ -0.23
SPSB4-201ENST00000310546 C15orf32Q32M92 178 aa13.61□□□□□ -0.23
SPSB4-201ENST00000310546 DPM3Q9P2X0 92 aa13.61□□□□□ -0.23
SPSB4-201ENST00000310546 TRIAP1O43715 76 aa13.6□□□□□ -0.23
SPSB4-201ENST00000310546 CCDC168Q8NDH2 2452 aa13.6□□□□□ -0.23
SPSB4-201ENST00000310546 GPHB5Q86YW7 130 aa13.6□□□□□ -0.23
SPSB4-201ENST00000310546 NPBQ8NG41 125 aa13.6□□□□□ -0.23
SPSB4-201ENST00000310546 SPANXA1Q9NS26 97 aa13.6□□□□□ -0.23
SPSB4-201ENST00000310546 CSPG4Q6UVK1 2322 aa13.59□□□□□ -0.23
SPSB4-201ENST00000310546 A0A0B4J2C4 111 aa13.59□□□□□ -0.23
SPSB4-201ENST00000310546 BBC3Q96PG8 261 aaPredicted RBP13.59□□□□□ -0.23
SPSB4-201ENST00000310546 UBTD1Q9HAC8 227 aa13.59□□□□□ -0.23
SPSB4-201ENST00000310546 C9orf47Q6ZRZ4 202 aa13.59□□□□□ -0.23
SPSB4-201ENST00000310546 ZFAND3Q9H8U3 227 aa13.58□□□□□ -0.24
SPSB4-201ENST00000310546 DEFB1P60022 68 aa13.58□□□□□ -0.24
SPSB4-201ENST00000310546 C16orf92Q96LL3 132 aa13.58□□□□□ -0.24
SPSB4-201ENST00000310546 OPRPNQ99935 248 aaPredicted RBP13.58□□□□□ -0.24
SPSB4-201ENST00000310546 PRSS2P07478 247 aa13.57□□□□□ -0.24
SPSB4-201ENST00000310546 FBXL19-AS1Q494R0 122 aa13.57□□□□□ -0.24
SPSB4-201ENST00000310546 B9A039 149 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms