RNA–Protein interactions for RNA: ENST00000309836.9

SPIRE1-201, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2 BASIC

Gene SPIRE1, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-201ENST00000309836 TP53TG1Q9Y2A0 90 aa11.29□□□□□ -0.6
SPIRE1-201ENST00000309836 IGIPA6NJ69 53 aa11.28□□□□□ -0.6
SPIRE1-201ENST00000309836 E9PLD3 99 aa11.28□□□□□ -0.6
SPIRE1-201ENST00000309836 MORN3Q6PF18 240 aaPredicted RBP11.28□□□□□ -0.6
SPIRE1-201ENST00000309836 DUX5Q96PT3 197 aa11.28□□□□□ -0.6
SPIRE1-201ENST00000309836 PRADC1Q9BSG0 188 aa11.28□□□□□ -0.6
SPIRE1-201ENST00000309836 F5H697 171 aa11.27□□□□□ -0.6
SPIRE1-201ENST00000309836 SAP30O75446 220 aa11.27□□□□□ -0.6
SPIRE1-201ENST00000309836 RPL39P62891 51 aaKnown RBP11.27□□□□□ -0.6
SPIRE1-201ENST00000309836 C21orf62-AS1Q17RA5 79 aa11.27□□□□□ -0.6
SPIRE1-201ENST00000309836 SPINK13Q1W4C9 94 aa11.27□□□□□ -0.6
SPIRE1-201ENST00000309836 Q8N1Y9 231 aa11.27□□□□□ -0.6
SPIRE1-201ENST00000309836 IGLV4-69A0A075B6H9 119 aa11.27□□□□□ -0.61
SPIRE1-201ENST00000309836 IGHV1OR15-1A0A075B7D0 117 aa11.27□□□□□ -0.61
SPIRE1-201ENST00000309836 TRBV6-5A0A0K0K1A5 114 aa11.27□□□□□ -0.61
SPIRE1-201ENST00000309836 VCYO14598 125 aa11.27□□□□□ -0.61
SPIRE1-201ENST00000309836 ELANEP08246 267 aa11.27□□□□□ -0.61
SPIRE1-201ENST00000309836 HOXD3P31249 432 aaPredicted RBP11.27□□□□□ -0.61
SPIRE1-201ENST00000309836 PCP4P48539 62 aa11.27□□□□□ -0.61
SPIRE1-201ENST00000309836 Q6YL49 198 aa11.27□□□□□ -0.61
SPIRE1-201ENST00000309836 HIST1H4GQ99525 98 aa11.27□□□□□ -0.61
SPIRE1-201ENST00000309836 SDHAF1A6NFY7 115 aa11.26□□□□□ -0.61
SPIRE1-201ENST00000309836 C11orf86A6NJI1 115 aa11.26□□□□□ -0.61
SPIRE1-201ENST00000309836 PRB1P04280 392 aa11.26□□□□□ -0.61
SPIRE1-201ENST00000309836 RIPPLY3P57055 190 aa11.26□□□□□ -0.61
SPIRE1-201ENST00000309836 C12orf74Q32Q52 190 aa11.26□□□□□ -0.61
SPIRE1-201ENST00000309836 FAM74A4Q5TZK3 123 aa11.26□□□□□ -0.61
SPIRE1-201ENST00000309836 AMTNQ6UX39 209 aa11.26□□□□□ -0.61
SPIRE1-201ENST00000309836 FBN2P35556 2912 aa11.25□□□□□ -0.61
SPIRE1-201ENST00000309836 IGLL5B9A064 214 aa11.25□□□□□ -0.61
SPIRE1-201ENST00000309836 IGHV4-31P0DP07 118 aa11.25□□□□□ -0.61
SPIRE1-201ENST00000309836 CRYBG3Q68DQ2 2970 aa11.25□□□□□ -0.61
SPIRE1-201ENST00000309836 TRBV27A0A0K0K1C4 114 aa11.25□□□□□ -0.61
SPIRE1-201ENST00000309836 M0QY20 66 aa11.25□□□□□ -0.61
SPIRE1-201ENST00000309836 COX6B1P14854 86 aa11.25□□□□□ -0.61
SPIRE1-201ENST00000309836 SYT8Q8NBV8 401 aa11.25□□□□□ -0.61
SPIRE1-201ENST00000309836 PMVKQ15126 192 aa11.24□□□□□ -0.61
SPIRE1-201ENST00000309836 FOXI2Q6ZQN5 318 aa11.24□□□□□ -0.61
SPIRE1-201ENST00000309836 C18orf65Q6ZTR6 163 aa11.24□□□□□ -0.61
SPIRE1-201ENST00000309836 RNF152Q8N8N0 203 aa11.24□□□□□ -0.61
SPIRE1-201ENST00000309836 TMEM141Q96I45 108 aa11.24□□□□□ -0.61
SPIRE1-201ENST00000309836 UBE2E2Q96LR5 201 aa11.24□□□□□ -0.61
SPIRE1-201ENST00000309836 KIR2DL4Q99706 377 aa11.24□□□□□ -0.61
SPIRE1-201ENST00000309836 BEX4Q9NWD9 120 aaPredicted RBP11.24□□□□□ -0.61
SPIRE1-201ENST00000309836 AGRNO00468 2067 aa11.24□□□□□ -0.61
SPIRE1-201ENST00000309836 K7ERU9 68 aa11.23□□□□□ -0.61
SPIRE1-201ENST00000309836 EMP1P54849 157 aa11.23□□□□□ -0.61
SPIRE1-201ENST00000309836 ZNF56Q15929 161 aa11.23□□□□□ -0.61
SPIRE1-201ENST00000309836 PLEKHB2Q96CS7 222 aa11.23□□□□□ -0.61
SPIRE1-201ENST00000309836 TIMM17AQ99595 171 aa11.23□□□□□ -0.61
SPIRE1-201ENST00000309836 A0A1B0GWB2 263 aa11.23□□□□□ -0.61
SPIRE1-201ENST00000309836 LINC01549A6NIU2 74 aa11.23□□□□□ -0.61
SPIRE1-201ENST00000309836 ZNF815PA8K554 130 aa11.23□□□□□ -0.61
SPIRE1-201ENST00000309836 HOXA3O43365 443 aaPredicted RBP11.23□□□□□ -0.61
SPIRE1-201ENST00000309836 RBMY1A1P0DJD3 496 aaKnown RBP11.23□□□□□ -0.61
SPIRE1-201ENST00000309836 RBMY1CP0DJD4 496 aa11.23□□□□□ -0.61
SPIRE1-201ENST00000309836 RBMY1FQ15415 496 aaKnown RBP11.23□□□□□ -0.61
SPIRE1-201ENST00000309836 CD300EQ496F6 205 aaPredicted RBP11.23□□□□□ -0.61
SPIRE1-201ENST00000309836 VPS25Q9BRG1 176 aa11.23□□□□□ -0.61
SPIRE1-201ENST00000309836 ZNF256Q9Y2P7 627 aaPredicted RBP11.23□□□□□ -0.61
SPIRE1-201ENST00000309836 ANKRD17O75179 2603 aaKnown RBP11.22□□□□□ -0.61
SPIRE1-201ENST00000309836 CR1P17927 2039 aa11.22□□□□□ -0.61
SPIRE1-201ENST00000309836 KNCNA6PVL3 124 aa11.22□□□□□ -0.61
SPIRE1-201ENST00000309836 SLURP1P55000 103 aa11.22□□□□□ -0.61
SPIRE1-201ENST00000309836 KRTAP10-9P60411 292 aa11.22□□□□□ -0.61
SPIRE1-201ENST00000309836 TCTEX1D4Q5JR98 221 aa11.22□□□□□ -0.61
SPIRE1-201ENST00000309836 MYO18BQ8IUG5 2567 aa11.22□□□□□ -0.61
SPIRE1-201ENST00000309836 ZANQ9Y493 2812 aa11.22□□□□□ -0.61
SPIRE1-201ENST00000309836 DEFB136Q30KP8 78 aa11.21□□□□□ -0.62
SPIRE1-201ENST00000309836 KLHL30-AS1Q8NEE0 82 aa11.21□□□□□ -0.62
SPIRE1-201ENST00000309836 ZNF479Q96JC4 524 aa11.21□□□□□ -0.62
SPIRE1-201ENST00000309836 RRN3P1Q2M238 152 aa11.2□□□□□ -0.62
SPIRE1-201ENST00000309836 NSUN5P1Q3KNT7 163 aa11.2□□□□□ -0.62
SPIRE1-201ENST00000309836 PAPPA-AS1Q5QFB9 102 aa11.2□□□□□ -0.62
SPIRE1-201ENST00000309836 TRPT1Q86TN4 253 aaKnown RBP11.2□□□□□ -0.62
SPIRE1-201ENST00000309836 BBC3Q96PG8 261 aaPredicted RBP11.2□□□□□ -0.62
SPIRE1-201ENST00000309836 TRGV11A0A075B6L2 103 aa11.19□□□□□ -0.62
SPIRE1-201ENST00000309836 TSPEAR-AS2P59090 65 aa11.19□□□□□ -0.62
SPIRE1-201ENST00000309836 RHOHQ15669 191 aa11.19□□□□□ -0.62
SPIRE1-201ENST00000309836 ZNF876PQ49A33 203 aa11.19□□□□□ -0.62
SPIRE1-201ENST00000309836 ZNRF2Q8NHG8 242 aa11.19□□□□□ -0.62
SPIRE1-201ENST00000309836 USP9YO00507 2555 aaPredicted RBP11.19□□□□□ -0.62
SPIRE1-201ENST00000309836 POLQO75417 2590 aa11.19□□□□□ -0.62
SPIRE1-201ENST00000309836 RBMY1BA6NDE4 496 aaKnown RBP11.19□□□□□ -0.62
SPIRE1-201ENST00000309836 RBMY1EA6NEQ0 496 aaKnown RBP11.19□□□□□ -0.62
SPIRE1-201ENST00000309836 A8MTW9 85 aa11.19□□□□□ -0.62
SPIRE1-201ENST00000309836 G3V4G9 280 aa11.19□□□□□ -0.62
SPIRE1-201ENST00000309836 RBMY1DP0C7P1 496 aaKnown RBP11.19□□□□□ -0.62
SPIRE1-201ENST00000309836 P0DMU3 169 aa11.19□□□□□ -0.62
SPIRE1-201ENST00000309836 FAM231AP0DMU4 169 aa11.19□□□□□ -0.62
SPIRE1-201ENST00000309836 FAM231CP0DMU5 169 aa11.19□□□□□ -0.62
SPIRE1-201ENST00000309836 OPRPNQ99935 248 aaPredicted RBP11.19□□□□□ -0.62
SPIRE1-201ENST00000309836 DEFB131AP59861 70 aa11.18□□□□□ -0.62
SPIRE1-201ENST00000309836 HERVK_113P61574 105 aa11.18□□□□□ -0.62
SPIRE1-201ENST00000309836 SCGB2A2Q13296 93 aa11.18□□□□□ -0.62
SPIRE1-201ENST00000309836 Q8N2B8 174 aa11.18□□□□□ -0.62
SPIRE1-201ENST00000309836 DOPEY2Q9Y3R5 2298 aa11.18□□□□□ -0.62
SPIRE1-201ENST00000309836 SCGB1D4Q6XE38 83 aa11.17□□□□□ -0.62
SPIRE1-201ENST00000309836 ACACBO00763 2458 aa11.17□□□□□ -0.62
SPIRE1-201ENST00000309836 CSMD2Q7Z408 3487 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms