RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 SPANXB1Q9NS25 103 aaPredicted RBP9.74□□□□□ -0.85
RETREG3-201ENST00000309428 DUSP14O95147 198 aaKnown RBP9.73□□□□□ -0.85
RETREG3-201ENST00000309428 RPL39P62891 51 aaKnown RBP9.73□□□□□ -0.85
RETREG3-201ENST00000309428 PAX8Q06710 450 aa9.73□□□□□ -0.85
RETREG3-201ENST00000309428 KNCNA6PVL3 124 aa9.73□□□□□ -0.85
RETREG3-201ENST00000309428 OVOL3O00110 214 aa9.73□□□□□ -0.85
RETREG3-201ENST00000309428 UFSP1Q6NVU6 142 aa9.73□□□□□ -0.85
RETREG3-201ENST00000309428 NTN5Q8WTR8 489 aaPredicted RBP9.73□□□□□ -0.85
RETREG3-201ENST00000309428 DPH3P1Q9H4G8 78 aa9.73□□□□□ -0.85
RETREG3-201ENST00000309428 PRSS47A8MTI9 375 aa9.73□□□□□ -0.85
RETREG3-201ENST00000309428 CRYGBP07316 175 aa9.73□□□□□ -0.85
RETREG3-201ENST00000309428 EDN2P20800 178 aa9.73□□□□□ -0.85
RETREG3-201ENST00000309428 UNQ9165/PRO28630Q6UXU0 137 aa9.73□□□□□ -0.85
RETREG3-201ENST00000309428 USP24Q9UPU5 2620 aa9.73□□□□□ -0.85
RETREG3-201ENST00000309428 FSTL3O95633 263 aa9.72□□□□□ -0.85
RETREG3-201ENST00000309428 IGLV11-55A0A075B6I3 123 aa9.72□□□□□ -0.85
RETREG3-201ENST00000309428 IGHV4-30-2A0A087WSY4 118 aa9.72□□□□□ -0.85
RETREG3-201ENST00000309428 TRAV41A0A0B4J266 112 aa9.72□□□□□ -0.85
RETREG3-201ENST00000309428 PSMG4Q5JS54 123 aa9.72□□□□□ -0.85
RETREG3-201ENST00000309428 TRAV12-2A0A075B6T6 113 aa9.72□□□□□ -0.85
RETREG3-201ENST00000309428 ZNF876PQ49A33 203 aa9.72□□□□□ -0.85
RETREG3-201ENST00000309428 ITPR3Q14573 2671 aa9.72□□□□□ -0.85
RETREG3-201ENST00000309428 PPDPFLQ8WWR9 84 aa9.71□□□□□ -0.85
RETREG3-201ENST00000309428 TRAV8-3A0A0A6YYJ7 113 aa9.71□□□□□ -0.85
RETREG3-201ENST00000309428 CENPVL3A0A0U1RRI6 287 aa9.71□□□□□ -0.85
RETREG3-201ENST00000309428 RS1O15537 224 aa9.71□□□□□ -0.85
RETREG3-201ENST00000309428 FOXI1Q12951 378 aa9.71□□□□□ -0.85
RETREG3-201ENST00000309428 OR11H6Q8NGC7 330 aa9.71□□□□□ -0.85
RETREG3-201ENST00000309428 RNF183Q96D59 192 aa9.71□□□□□ -0.85
RETREG3-201ENST00000309428 JPT2Q9H910 190 aa9.71□□□□□ -0.85
RETREG3-201ENST00000309428 PLEKHB2Q96CS7 222 aa9.71□□□□□ -0.86
RETREG3-201ENST00000309428 OPRPNQ99935 248 aaPredicted RBP9.71□□□□□ -0.86
RETREG3-201ENST00000309428 TRAV8-4A0A0B4J246 113 aa9.7□□□□□ -0.86
RETREG3-201ENST00000309428 MEIG1Q5JSS6 88 aa9.7□□□□□ -0.86
RETREG3-201ENST00000309428 C2orf82Q6UX34 121 aa9.7□□□□□ -0.86
RETREG3-201ENST00000309428 HELZ2Q9BYK8 2649 aaKnown RBP9.7□□□□□ -0.86
RETREG3-201ENST00000309428 A0A1W2PRX2 142 aa9.7□□□□□ -0.86
RETREG3-201ENST00000309428 M0R1W7 72 aa9.7□□□□□ -0.86
RETREG3-201ENST00000309428 SLC25A20O43772 301 aa9.7□□□□□ -0.86
RETREG3-201ENST00000309428 RNASE1P07998 156 aaKnown RBP9.7□□□□□ -0.86
RETREG3-201ENST00000309428 TRPT1Q86TN4 253 aaKnown RBP9.7□□□□□ -0.86
RETREG3-201ENST00000309428 LY6LH3BQJ8 138 aa9.69□□□□□ -0.86
RETREG3-201ENST00000309428 SDHAF1A6NFY7 115 aa9.69□□□□□ -0.86
RETREG3-201ENST00000309428 CD28P10747 220 aa9.69□□□□□ -0.86
RETREG3-201ENST00000309428 HIST2H2BCQ6DN03 193 aa9.69□□□□□ -0.86
RETREG3-201ENST00000309428 ITLN2Q8WWU7 325 aaPredicted RBP9.69□□□□□ -0.86
RETREG3-201ENST00000309428 PIMREGQ9BSJ6 248 aa9.69□□□□□ -0.86
RETREG3-201ENST00000309428 KLK9Q9UKQ9 250 aa9.69□□□□□ -0.86
RETREG3-201ENST00000309428 E9PLD3 99 aa9.69□□□□□ -0.86
RETREG3-201ENST00000309428 SMIM20Q8N5G0 67 aa9.69□□□□□ -0.86
RETREG3-201ENST00000309428 DEFB136Q30KP8 78 aa9.68□□□□□ -0.86
RETREG3-201ENST00000309428 ZNF493Q6ZR52 646 aa9.68□□□□□ -0.86
RETREG3-201ENST00000309428 C1QTNF4Q9BXJ3 329 aa9.68□□□□□ -0.86
RETREG3-201ENST00000309428 SMAD5-AS1Q9Y6J3 95 aa9.68□□□□□ -0.86
RETREG3-201ENST00000309428 LGALS1P09382 135 aaKnown RBP9.68□□□□□ -0.86
RETREG3-201ENST00000309428 C10orf126Q8N4M7 172 aa9.68□□□□□ -0.86
RETREG3-201ENST00000309428 TMEM262E9PQX1 116 aa9.68□□□□□ -0.86
RETREG3-201ENST00000309428 PRO1854Q9UHT4 67 aa9.68□□□□□ -0.86
RETREG3-201ENST00000309428 UBE2E1P51965 193 aa9.67□□□□□ -0.86
RETREG3-201ENST00000309428 ANKRD29Q8N6D5 301 aa9.67□□□□□ -0.86
RETREG3-201ENST00000309428 ID1P41134 155 aa9.67□□□□□ -0.86
RETREG3-201ENST00000309428 PHLDA1Q8WV24 401 aaPredicted RBP9.67□□□□□ -0.86
RETREG3-201ENST00000309428 RNF185Q96GF1 192 aa9.67□□□□□ -0.86
RETREG3-201ENST00000309428 CCDC140Q96MF4 163 aa9.67□□□□□ -0.86
RETREG3-201ENST00000309428 TOMM7Q9P0U1 55 aa9.67□□□□□ -0.86
RETREG3-201ENST00000309428 NBEAL2Q6ZNJ1 2754 aa9.67□□□□□ -0.86
RETREG3-201ENST00000309428 A4D1N5 150 aa9.67□□□□□ -0.86
RETREG3-201ENST00000309428 C11orf86A6NJI1 115 aa9.67□□□□□ -0.86
RETREG3-201ENST00000309428 LMO4P61968 165 aa9.67□□□□□ -0.86
RETREG3-201ENST00000309428 WI2-2373I1.2A0A1W2PRP0 233 aa9.66□□□□□ -0.86
RETREG3-201ENST00000309428 RNF223E7ERA6 249 aa9.66□□□□□ -0.86
RETREG3-201ENST00000309428 F8W735 103 aaPredicted RBP9.66□□□□□ -0.86
RETREG3-201ENST00000309428 HIGD1BQ9P298 99 aa9.66□□□□□ -0.86
RETREG3-201ENST00000309428 J3QQQ9 107 aa9.66□□□□□ -0.86
RETREG3-201ENST00000309428 IGHV4-59P01825 116 aa9.66□□□□□ -0.86
RETREG3-201ENST00000309428 C8orf31Q8N9H6 132 aa9.66□□□□□ -0.86
RETREG3-201ENST00000309428 C11orf21Q9P2W6 132 aa9.66□□□□□ -0.86
RETREG3-201ENST00000309428 HHLA3Q9XRX5 114 aa9.66□□□□□ -0.86
RETREG3-201ENST00000309428 LY6G5BQ8NDX9 201 aa9.66□□□□□ -0.86
RETREG3-201ENST00000309428 RHPN1-AS1Q9BWJ2 59 aa9.66□□□□□ -0.86
RETREG3-201ENST00000309428 PRM2P04554 102 aa9.65□□□□□ -0.86
RETREG3-201ENST00000309428 RNF5Q99942 180 aa9.65□□□□□ -0.86
RETREG3-201ENST00000309428 SIRPDQ9H106 197 aa9.65□□□□□ -0.86
RETREG3-201ENST00000309428 TNFRSF18Q9Y5U5 241 aa9.65□□□□□ -0.86
RETREG3-201ENST00000309428 RBAKDNA6NC62 111 aa9.65□□□□□ -0.86
RETREG3-201ENST00000309428 INS-IGF2F8WCM5 200 aa9.65□□□□□ -0.86
RETREG3-201ENST00000309428 BUB3O43684 328 aa9.65□□□□□ -0.86
RETREG3-201ENST00000309428 DAND5Q8N907 189 aa9.65□□□□□ -0.86
RETREG3-201ENST00000309428 ZNF48Q96MX3 618 aaPredicted RBP9.65□□□□□ -0.86
RETREG3-201ENST00000309428 TCL1BO95988 128 aa9.65□□□□□ -0.87
RETREG3-201ENST00000309428 PMVKQ15126 192 aa9.65□□□□□ -0.87
RETREG3-201ENST00000309428 SPINK13Q1W4C9 94 aa9.65□□□□□ -0.87
RETREG3-201ENST00000309428 MXRA5Q9NR99 2828 aa9.64□□□□□ -0.87
RETREG3-201ENST00000309428 IGHV3-38A0A0C4DH36 116 aa9.64□□□□□ -0.87
RETREG3-201ENST00000309428 VCYO14598 125 aa9.64□□□□□ -0.87
RETREG3-201ENST00000309428 IGLC6P0CF74 106 aa9.64□□□□□ -0.87
RETREG3-201ENST00000309428 PAPPA-AS1Q5QFB9 102 aa9.64□□□□□ -0.87
RETREG3-201ENST00000309428 M0R2P5 195 aa9.64□□□□□ -0.87
RETREG3-201ENST00000309428 C11orf71Q6IPW1 123 aa9.64□□□□□ -0.87
RETREG3-201ENST00000309428 BAALCQ8WXS3 180 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms