RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 FAM231DQ6ZW35 169 aa10.6□□□□□ -0.71
TRIM56-201ENST00000306085 VOPP1Q96AW1 172 aa10.6□□□□□ -0.71
TRIM56-201ENST00000306085 F8W735 103 aaPredicted RBP10.6□□□□□ -0.71
TRIM56-201ENST00000306085 K7EQD1 137 aa10.6□□□□□ -0.71
TRIM56-201ENST00000306085 CCL18P55774 89 aa10.6□□□□□ -0.71
TRIM56-201ENST00000306085 H3BRN7 92 aa10.6□□□□□ -0.71
TRIM56-201ENST00000306085 DIRC1Q969H9 104 aa10.6□□□□□ -0.71
TRIM56-201ENST00000306085 JMJD7-PLA2G4BH0Y9G9 81 aa10.59□□□□□ -0.71
TRIM56-201ENST00000306085 Q6ZRM9 215 aa10.59□□□□□ -0.71
TRIM56-201ENST00000306085 C11orf52Q96A22 123 aa10.59□□□□□ -0.71
TRIM56-201ENST00000306085 IGHV7-4-1A0A0J9YVY3 117 aa10.59□□□□□ -0.71
TRIM56-201ENST00000306085 NDUFA1O15239 70 aa10.59□□□□□ -0.71
TRIM56-201ENST00000306085 ZNF491Q8N8L2 437 aa10.58□□□□□ -0.72
TRIM56-201ENST00000306085 PTPRBP23467 1997 aa10.58□□□□□ -0.72
TRIM56-201ENST00000306085 KIR2DL5BA0A0G2JN68 375 aa10.58□□□□□ -0.72
TRIM56-201ENST00000306085 KIR2DL5BA0A0G2JPC4 375 aa10.58□□□□□ -0.72
TRIM56-201ENST00000306085 KIR2DL5AQ8N109 375 aa10.58□□□□□ -0.72
TRIM56-201ENST00000306085 IGHV4-30-2A0A087WSY4 118 aa10.58□□□□□ -0.72
TRIM56-201ENST00000306085 BPY2O14599 106 aa10.58□□□□□ -0.72
TRIM56-201ENST00000306085 COL24A1Q17RW2 1714 aa10.58□□□□□ -0.72
TRIM56-201ENST00000306085 IGLV3-32A0A0A0MS00 114 aa10.58□□□□□ -0.72
TRIM56-201ENST00000306085 SDIM1Q6ZPB5 146 aa10.58□□□□□ -0.72
TRIM56-201ENST00000306085 IGHV1-69DA0A0B4J2H0 117 aa10.58□□□□□ -0.72
TRIM56-201ENST00000306085 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.58□□□□□ -0.72
TRIM56-201ENST00000306085 IGHV1-69P01742 117 aa10.58□□□□□ -0.72
TRIM56-201ENST00000306085 GATA3P23771 443 aa10.58□□□□□ -0.72
TRIM56-201ENST00000306085 TMEM14CQ9P0S9 112 aa10.58□□□□□ -0.72
TRIM56-201ENST00000306085 CXCL5P42830 114 aa10.57□□□□□ -0.72
TRIM56-201ENST00000306085 SPRY2O43597 315 aa10.57□□□□□ -0.72
TRIM56-201ENST00000306085 TANC1Q9C0D5 1861 aa10.57□□□□□ -0.72
TRIM56-201ENST00000306085 TEX49A0A1B0GTD5 131 aa10.57□□□□□ -0.72
TRIM56-201ENST00000306085 TRBV6-6A0A0A6YYG2 114 aa10.57□□□□□ -0.72
TRIM56-201ENST00000306085 C5orf63A6NC05 138 aa10.56□□□□□ -0.72
TRIM56-201ENST00000306085 DAZ2Q13117 558 aaKnown RBP10.56□□□□□ -0.72
TRIM56-201ENST00000306085 DAZ4Q86SG3 579 aaKnown RBP10.56□□□□□ -0.72
TRIM56-201ENST00000306085 DAZ3Q9NR90 486 aaKnown RBP10.56□□□□□ -0.72
TRIM56-201ENST00000306085 NDUFV3P56181 108 aaKnown RBP10.56□□□□□ -0.72
TRIM56-201ENST00000306085 DEFB136Q30KP8 78 aa10.56□□□□□ -0.72
TRIM56-201ENST00000306085 FAM120AOSQ5T036 256 aa10.56□□□□□ -0.72
TRIM56-201ENST00000306085 C20orf197Q8N268 126 aa10.56□□□□□ -0.72
TRIM56-201ENST00000306085 PRR20EP86478 221 aa10.56□□□□□ -0.72
TRIM56-201ENST00000306085 PRR20CP86479 221 aa10.56□□□□□ -0.72
TRIM56-201ENST00000306085 PRR20DP86480 221 aa10.56□□□□□ -0.72
TRIM56-201ENST00000306085 PRR20BP86481 221 aa10.56□□□□□ -0.72
TRIM56-201ENST00000306085 PRR20AP86496 221 aa10.56□□□□□ -0.72
TRIM56-201ENST00000306085 HIST2H2BDQ6DRA6 164 aa10.56□□□□□ -0.72
TRIM56-201ENST00000306085 ESM1Q9NQ30 184 aa10.56□□□□□ -0.72
TRIM56-201ENST00000306085 PLXNA4Q9HCM2 1894 aa10.56□□□□□ -0.72
TRIM56-201ENST00000306085 ATP5G1P05496 136 aa10.56□□□□□ -0.72
TRIM56-201ENST00000306085 ADAMTS7Q9UKP4 1686 aa10.55□□□□□ -0.72
TRIM56-201ENST00000306085 FXYD5Q96DB9 178 aa10.55□□□□□ -0.72
TRIM56-201ENST00000306085 CDPF1Q6NVV7 123 aa10.55□□□□□ -0.72
TRIM56-201ENST00000306085 Q0VFX4 171 aa10.55□□□□□ -0.72
TRIM56-201ENST00000306085 KIAA1549LQ6ZVL6 1849 aa10.55□□□□□ -0.72
TRIM56-201ENST00000306085 PKD1L2Q7Z442 2459 aa10.55□□□□□ -0.72
TRIM56-201ENST00000306085 ATP6V0E2Q8NHE4 81 aa10.54□□□□□ -0.72
TRIM56-201ENST00000306085 FGF23Q9GZV9 251 aaPredicted RBP10.54□□□□□ -0.72
TRIM56-201ENST00000306085 GATA1P15976 413 aaPredicted RBP10.54□□□□□ -0.72
TRIM56-201ENST00000306085 RNF144BQ7Z419 303 aa10.54□□□□□ -0.72
TRIM56-201ENST00000306085 APRG1Q8IVJ8 170 aa10.54□□□□□ -0.72
TRIM56-201ENST00000306085 NUP210LQ5VU65 1888 aa10.54□□□□□ -0.72
TRIM56-201ENST00000306085 IGHV4-30-4P0DP06 118 aa10.54□□□□□ -0.72
TRIM56-201ENST00000306085 IGHV4-31P0DP07 118 aa10.54□□□□□ -0.72
TRIM56-201ENST00000306085 ZNF747Q9BV97 191 aa10.54□□□□□ -0.72
TRIM56-201ENST00000306085 C16orf74Q96GX8 76 aa10.53□□□□□ -0.72
TRIM56-201ENST00000306085 IGKV1-6A0A0C4DH72 117 aa10.53□□□□□ -0.72
TRIM56-201ENST00000306085 LOXL1Q08397 574 aaPredicted RBP10.53□□□□□ -0.72
TRIM56-201ENST00000306085 PRR30Q53SZ7 412 aaPredicted RBP10.53□□□□□ -0.72
TRIM56-201ENST00000306085 ZNF833PQ6ZTB9 187 aa10.53□□□□□ -0.72
TRIM56-201ENST00000306085 E7EQL1 145 aa10.53□□□□□ -0.72
TRIM56-201ENST00000306085 SCXQ7RTU7 201 aa10.53□□□□□ -0.72
TRIM56-201ENST00000306085 EIF4EBP2Q13542 120 aaPredicted RBP10.53□□□□□ -0.72
TRIM56-201ENST00000306085 GTSF1Q8WW33 167 aa10.53□□□□□ -0.72
TRIM56-201ENST00000306085 SERP1Q9Y6X1 66 aa10.53□□□□□ -0.72
TRIM56-201ENST00000306085 CCL24O00175 119 aa10.53□□□□□ -0.72
TRIM56-201ENST00000306085 TPSG1Q9NRR2 321 aa10.53□□□□□ -0.72
TRIM56-201ENST00000306085 HIVEP2P31629 2446 aa10.52□□□□□ -0.72
TRIM56-201ENST00000306085 K7EN84 100 aa10.52□□□□□ -0.72
TRIM56-201ENST00000306085 FXYD2P54710 66 aa10.52□□□□□ -0.72
TRIM56-201ENST00000306085 LYPD6BQ8NI32 183 aa10.52□□□□□ -0.72
TRIM56-201ENST00000306085 C10orf91Q5T1B1 145 aa10.52□□□□□ -0.72
TRIM56-201ENST00000306085 COX7BP24311 80 aa10.52□□□□□ -0.73
TRIM56-201ENST00000306085 ELANEP08246 267 aa10.52□□□□□ -0.73
TRIM56-201ENST00000306085 RNF138Q8WVD3 245 aa10.52□□□□□ -0.73
TRIM56-201ENST00000306085 IL15RAQ13261 267 aa10.51□□□□□ -0.73
TRIM56-201ENST00000306085 RETNQ9HD89 108 aa10.51□□□□□ -0.73
TRIM56-201ENST00000306085 A0A096LNI7 61 aa10.51□□□□□ -0.73
TRIM56-201ENST00000306085 PDE6GP18545 87 aa10.51□□□□□ -0.73
TRIM56-201ENST00000306085 RPL39P62891 51 aaKnown RBP10.51□□□□□ -0.73
TRIM56-201ENST00000306085 QRFPP83859 136 aa10.5□□□□□ -0.73
TRIM56-201ENST00000306085 IGLV3-12A0A075B6K2 115 aa10.5□□□□□ -0.73
TRIM56-201ENST00000306085 ZNF726P1Q15940 193 aa10.5□□□□□ -0.73
TRIM56-201ENST00000306085 C1orf195Q5TG92 126 aa10.5□□□□□ -0.73
TRIM56-201ENST00000306085 PIFOQ8TCI5 191 aa10.5□□□□□ -0.73
TRIM56-201ENST00000306085 TLN1Q9Y490 2541 aaKnown RBP10.5□□□□□ -0.73
TRIM56-201ENST00000306085 GPHB5Q86YW7 130 aa10.5□□□□□ -0.73
TRIM56-201ENST00000306085 ENHOQ6UWT2 76 aa10.5□□□□□ -0.73
TRIM56-201ENST00000306085 SLX1AQ9BQ83 275 aa10.5□□□□□ -0.73
TRIM56-201ENST00000306085 SPART-AS1P0CW21 52 aa10.5□□□□□ -0.73
TRIM56-201ENST00000306085 UNQ6494/PRO21346Q6UXR6 183 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms