RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 PRUNE2Q8WUY3 3088 aa6.99□□□□□ -1.29
PTPRE-202ENST00000306042 K7EQD1 137 aa6.99□□□□□ -1.29
PTPRE-202ENST00000306042 C1orf43Q9BWL3 253 aa6.99□□□□□ -1.29
PTPRE-202ENST00000306042 U3KQK5 164 aa6.99□□□□□ -1.29
PTPRE-202ENST00000306042 MRPL51Q4U2R6 128 aaKnown RBP6.98□□□□□ -1.29
PTPRE-202ENST00000306042 CLPSL2Q6UWE3 100 aa6.98□□□□□ -1.29
PTPRE-202ENST00000306042 V9GYV3 84 aa6.98□□□□□ -1.29
PTPRE-202ENST00000306042 TRBV7-9A0A0J9YWB2 115 aa6.98□□□□□ -1.29
PTPRE-202ENST00000306042 IGKCP01834 107 aa6.98□□□□□ -1.29
PTPRE-202ENST00000306042 CXCL1P09341 107 aa6.98□□□□□ -1.29
PTPRE-202ENST00000306042 MIFP14174 115 aa6.98□□□□□ -1.29
PTPRE-202ENST00000306042 FAM222AQ5U5X8 452 aa6.98□□□□□ -1.29
PTPRE-202ENST00000306042 C2orf66Q6UXQ4 117 aa6.98□□□□□ -1.29
PTPRE-202ENST00000306042 RBMY1BA6NDE4 496 aaKnown RBP6.97□□□□□ -1.29
PTPRE-202ENST00000306042 RBMY1EA6NEQ0 496 aaKnown RBP6.97□□□□□ -1.29
PTPRE-202ENST00000306042 RBMY1DP0C7P1 496 aaKnown RBP6.97□□□□□ -1.29
PTPRE-202ENST00000306042 RBMY1A1P0DJD3 496 aaKnown RBP6.97□□□□□ -1.29
PTPRE-202ENST00000306042 RBMY1CP0DJD4 496 aa6.97□□□□□ -1.29
PTPRE-202ENST00000306042 PRO0255Q9UI72 69 aa6.97□□□□□ -1.29
PTPRE-202ENST00000306042 C9JQL5 133 aa6.97□□□□□ -1.29
PTPRE-202ENST00000306042 SMIM6P0DI80 62 aa6.97□□□□□ -1.29
PTPRE-202ENST00000306042 P0DMU3 169 aa6.97□□□□□ -1.29
PTPRE-202ENST00000306042 FAM231AP0DMU4 169 aa6.97□□□□□ -1.29
PTPRE-202ENST00000306042 FAM231CP0DMU5 169 aa6.97□□□□□ -1.29
PTPRE-202ENST00000306042 DEFB131BA0A096LNP1 70 aa6.97□□□□□ -1.29
PTPRE-202ENST00000306042 KIR2DL5BA0A0G2JN68 375 aa6.97□□□□□ -1.29
PTPRE-202ENST00000306042 KIR2DL5BA0A0G2JPC4 375 aa6.97□□□□□ -1.29
PTPRE-202ENST00000306042 ZNF124Q15973 351 aa6.97□□□□□ -1.29
PTPRE-202ENST00000306042 KIR2DL5AQ8N109 375 aa6.97□□□□□ -1.29
PTPRE-202ENST00000306042 KIR2DL5BQ8NHK3 375 aa6.97□□□□□ -1.29
PTPRE-202ENST00000306042 LOC107984156A0A0G2JMH3 177 aa6.97□□□□□ -1.29
PTPRE-202ENST00000306042 PET117Q6UWS5 81 aa6.97□□□□□ -1.29
PTPRE-202ENST00000306042 ARL17AQ8IVW1 177 aa6.97□□□□□ -1.29
PTPRE-202ENST00000306042 LYRM9A8MSI8 78 aa6.96□□□□□ -1.29
PTPRE-202ENST00000306042 IGHV3-30P01768 117 aa6.96□□□□□ -1.29
PTPRE-202ENST00000306042 IGHV3-33P01772 117 aa6.96□□□□□ -1.29
PTPRE-202ENST00000306042 IGHV3-30-3P0DP02 117 aa6.96□□□□□ -1.29
PTPRE-202ENST00000306042 IGHV3-30-5P0DP03 117 aa6.96□□□□□ -1.29
PTPRE-202ENST00000306042 PROK1P58294 105 aa6.96□□□□□ -1.3
PTPRE-202ENST00000306042 Q8N8P6 123 aa6.96□□□□□ -1.3
PTPRE-202ENST00000306042 ZNF503Q96F45 646 aa6.96□□□□□ -1.3
PTPRE-202ENST00000306042 TANC2Q9HCD6 1990 aa6.96□□□□□ -1.3
PTPRE-202ENST00000306042 HCFC1P51610 2035 aa6.96□□□□□ -1.3
PTPRE-202ENST00000306042 SLC25A20O43772 301 aa6.96□□□□□ -1.3
PTPRE-202ENST00000306042 DNAL4O96015 105 aa6.96□□□□□ -1.3
PTPRE-202ENST00000306042 ZNF25P17030 456 aaPredicted RBP6.96□□□□□ -1.3
PTPRE-202ENST00000306042 S100A7L2Q5SY68 101 aa6.96□□□□□ -1.3
PTPRE-202ENST00000306042 PLEKHB2Q96CS7 222 aa6.96□□□□□ -1.3
PTPRE-202ENST00000306042 DNAJC30Q96LL9 226 aa6.96□□□□□ -1.3
PTPRE-202ENST00000306042 SMIM2Q9BVW6 85 aa6.96□□□□□ -1.3
PTPRE-202ENST00000306042 PLNP26678 52 aa6.96□□□□□ -1.3
PTPRE-202ENST00000306042 ODF3Q96PU9 254 aa6.96□□□□□ -1.3
PTPRE-202ENST00000306042 WFDC10AQ9H1F0 79 aa6.96□□□□□ -1.3
PTPRE-202ENST00000306042 UQCR10Q9UDW1 63 aa6.96□□□□□ -1.3
PTPRE-202ENST00000306042 SMIM27A0A1W2PRY6 76 aa6.95□□□□□ -1.3
PTPRE-202ENST00000306042 IGHV4-30-4P0DP06 118 aa6.95□□□□□ -1.3
PTPRE-202ENST00000306042 CRIP2P52943 208 aaPredicted RBP6.95□□□□□ -1.3
PTPRE-202ENST00000306042 J3QR89 54 aa6.95□□□□□ -1.3
PTPRE-202ENST00000306042 C20orf78Q9BR46 151 aa6.95□□□□□ -1.3
PTPRE-202ENST00000306042 PRIMA1Q86XR5 153 aa6.95□□□□□ -1.3
PTPRE-202ENST00000306042 C11orf1Q9H5F2 150 aa6.95□□□□□ -1.3
PTPRE-202ENST00000306042 ZNF580Q9UK33 172 aa6.95□□□□□ -1.3
PTPRE-202ENST00000306042 ZNF815PA8K554 130 aa6.95□□□□□ -1.3
PTPRE-202ENST00000306042 DAZ2Q13117 558 aaKnown RBP6.95□□□□□ -1.3
PTPRE-202ENST00000306042 DAZ4Q86SG3 579 aaKnown RBP6.95□□□□□ -1.3
PTPRE-202ENST00000306042 TMEM141Q96I45 108 aa6.95□□□□□ -1.3
PTPRE-202ENST00000306042 DAZ3Q9NR90 486 aaKnown RBP6.95□□□□□ -1.3
PTPRE-202ENST00000306042 MDFICQ9P1T7 246 aa6.95□□□□□ -1.3
PTPRE-202ENST00000306042 HIST1H2BKO60814 126 aa6.94□□□□□ -1.3
PTPRE-202ENST00000306042 HIST1H2BJP06899 126 aa6.94□□□□□ -1.3
PTPRE-202ENST00000306042 HIST1H2BOP23527 126 aa6.94□□□□□ -1.3
PTPRE-202ENST00000306042 HIST1H2BBP33778 126 aa6.94□□□□□ -1.3
PTPRE-202ENST00000306042 HIST1H2BDP58876 126 aa6.94□□□□□ -1.3
PTPRE-202ENST00000306042 HIST1H2BCP62807 126 aa6.94□□□□□ -1.3
PTPRE-202ENST00000306042 HIST2H2BEQ16778 126 aa6.94□□□□□ -1.3
PTPRE-202ENST00000306042 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.94□□□□□ -1.3
PTPRE-202ENST00000306042 HIST1H2BHQ93079 126 aa6.94□□□□□ -1.3
PTPRE-202ENST00000306042 HIST1H2BNQ99877 126 aa6.94□□□□□ -1.3
PTPRE-202ENST00000306042 HIST1H2BMQ99879 126 aa6.94□□□□□ -1.3
PTPRE-202ENST00000306042 JPT2Q9H910 190 aa6.94□□□□□ -1.3
PTPRE-202ENST00000306042 KLF12Q9Y4X4 402 aa6.94□□□□□ -1.3
PTPRE-202ENST00000306042 SNAI2O43623 268 aa6.94□□□□□ -1.3
PTPRE-202ENST00000306042 TIMM21Q9BVV7 248 aa6.94□□□□□ -1.3
PTPRE-202ENST00000306042 K7EN84 100 aa6.94□□□□□ -1.3
PTPRE-202ENST00000306042 AMTNQ6UX39 209 aa6.94□□□□□ -1.3
PTPRE-202ENST00000306042 TRAV26-1A0A087WT03 109 aa6.93□□□□□ -1.3
PTPRE-202ENST00000306042 NDUFS6O75380 124 aaKnown RBP6.93□□□□□ -1.3
PTPRE-202ENST00000306042 KRTAP24-1Q3LI83 254 aa6.93□□□□□ -1.3
PTPRE-202ENST00000306042 TRBV7-3A0A075B6L6 115 aa6.93□□□□□ -1.3
PTPRE-202ENST00000306042 TRAV4A0A0B4J268 109 aa6.93□□□□□ -1.3
PTPRE-202ENST00000306042 Q6ZTI0 123 aa6.93□□□□□ -1.3
PTPRE-202ENST00000306042 LAMA2P24043 3122 aaKnown RBP6.93□□□□□ -1.3
PTPRE-202ENST00000306042 NPYP01303 97 aa6.93□□□□□ -1.3
PTPRE-202ENST00000306042 IGLV1-51P01701 117 aa6.93□□□□□ -1.3
PTPRE-202ENST00000306042 XCL1P47992 114 aa6.93□□□□□ -1.3
PTPRE-202ENST00000306042 SUMO4Q6EEV6 95 aa6.93□□□□□ -1.3
PTPRE-202ENST00000306042 C20orf173Q96LM9 149 aa6.93□□□□□ -1.3
PTPRE-202ENST00000306042 USP24Q9UPU5 2620 aa6.92□□□□□ -1.3
PTPRE-202ENST00000306042 MYMXA0A1B0GTQ4 84 aa6.92□□□□□ -1.3
PTPRE-202ENST00000306042 SMIM13P0DJ93 91 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms