RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 DAZ2Q13117 558 aaKnown RBP9.87□□□□□ -0.83
COL3A1-201ENST00000304636 Q6ZUT4 128 aa9.87□□□□□ -0.83
COL3A1-201ENST00000304636 DAZ4Q86SG3 579 aaKnown RBP9.87□□□□□ -0.83
COL3A1-201ENST00000304636 Q8N1Y9 231 aa9.87□□□□□ -0.83
COL3A1-201ENST00000304636 DAZ3Q9NR90 486 aaKnown RBP9.87□□□□□ -0.83
COL3A1-201ENST00000304636 A0A1B0GX51 115 aa9.87□□□□□ -0.83
COL3A1-201ENST00000304636 TCL1BO95988 128 aa9.87□□□□□ -0.83
COL3A1-201ENST00000304636 IGLC6P0CF74 106 aa9.87□□□□□ -0.83
COL3A1-201ENST00000304636 XCL1P47992 114 aa9.87□□□□□ -0.83
COL3A1-201ENST00000304636 C5orf56Q8N8D9 126 aa9.87□□□□□ -0.83
COL3A1-201ENST00000304636 SPTBN2O15020 2390 aa9.87□□□□□ -0.83
COL3A1-201ENST00000304636 WT1P19544 449 aaPredicted RBP9.87□□□□□ -0.83
COL3A1-201ENST00000304636 SPANXB1Q9NS25 103 aaPredicted RBP9.87□□□□□ -0.83
COL3A1-201ENST00000304636 MSMPQ1L6U9 139 aa9.87□□□□□ -0.83
COL3A1-201ENST00000304636 FANCD2OSQ96PS1 177 aa9.87□□□□□ -0.83
COL3A1-201ENST00000304636 COL4A4P53420 1690 aaPredicted RBP9.87□□□□□ -0.83
COL3A1-201ENST00000304636 ZNF80P51504 273 aaPredicted RBP9.86□□□□□ -0.83
COL3A1-201ENST00000304636 IGHV1-58A0A0C4DH39 117 aa9.86□□□□□ -0.83
COL3A1-201ENST00000304636 K7EMT4 169 aa9.86□□□□□ -0.83
COL3A1-201ENST00000304636 K7EQD1 137 aa9.86□□□□□ -0.83
COL3A1-201ENST00000304636 MAPK1IP1LQ8NDC0 245 aa9.86□□□□□ -0.83
COL3A1-201ENST00000304636 ARHGAP21Q5T5U3 1957 aa9.86□□□□□ -0.83
COL3A1-201ENST00000304636 TRAV4A0A0B4J268 109 aa9.86□□□□□ -0.83
COL3A1-201ENST00000304636 GTF3C1Q12789 2109 aa9.86□□□□□ -0.83
COL3A1-201ENST00000304636 MED13Q9UHV7 2174 aa9.86□□□□□ -0.83
COL3A1-201ENST00000304636 SEM1Q6ZVN7 128 aa9.86□□□□□ -0.83
COL3A1-201ENST00000304636 CLEC2BQ92478 149 aa9.86□□□□□ -0.83
COL3A1-201ENST00000304636 SPRY4Q9C004 299 aa9.86□□□□□ -0.83
COL3A1-201ENST00000304636 TP73-AS1Q9UF72 201 aa9.86□□□□□ -0.83
COL3A1-201ENST00000304636 VPREB3Q9UKI3 123 aa9.86□□□□□ -0.83
COL3A1-201ENST00000304636 hADV29S1A0JD25 119 aa9.85□□□□□ -0.83
COL3A1-201ENST00000304636 GRNP28799 593 aaKnown RBP9.85□□□□□ -0.83
COL3A1-201ENST00000304636 Q8N7P7 452 aa9.85□□□□□ -0.83
COL3A1-201ENST00000304636 C20orf203Q8NBC4 194 aa9.85□□□□□ -0.83
COL3A1-201ENST00000304636 COX7B2Q8TF08 81 aa9.85□□□□□ -0.83
COL3A1-201ENST00000304636 DAND5Q8N907 189 aa9.85□□□□□ -0.83
COL3A1-201ENST00000304636 KIF26AQ9ULI4 1882 aaPredicted RBP9.85□□□□□ -0.83
COL3A1-201ENST00000304636 IGKV3D-7A0A0C4DH55 119 aa9.85□□□□□ -0.83
COL3A1-201ENST00000304636 DEFB112Q30KQ8 113 aa9.85□□□□□ -0.83
COL3A1-201ENST00000304636 CLPSL2Q6UWE3 100 aa9.85□□□□□ -0.83
COL3A1-201ENST00000304636 VSIG2Q96IQ7 327 aa9.85□□□□□ -0.83
COL3A1-201ENST00000304636 CACNA1HO95180 2353 aa9.85□□□□□ -0.83
COL3A1-201ENST00000304636 IGHV4-59P01825 116 aa9.84□□□□□ -0.83
COL3A1-201ENST00000304636 C5orf38Q86SI9 138 aa9.84□□□□□ -0.83
COL3A1-201ENST00000304636 ATP5G1P05496 136 aa9.84□□□□□ -0.83
COL3A1-201ENST00000304636 APOC4P55056 127 aa9.84□□□□□ -0.83
COL3A1-201ENST00000304636 NCOA6Q14686 2063 aaPredicted RBP9.84□□□□□ -0.83
COL3A1-201ENST00000304636 IGF2-ASQ6U949 168 aa9.83□□□□□ -0.84
COL3A1-201ENST00000304636 C1orf229Q6ZS94 237 aaPredicted RBP9.83□□□□□ -0.84
COL3A1-201ENST00000304636 SP5Q6BEB4 398 aaPredicted RBP9.83□□□□□ -0.84
COL3A1-201ENST00000304636 RNF183Q96D59 192 aa9.83□□□□□ -0.84
COL3A1-201ENST00000304636 U3KQK5 164 aa9.83□□□□□ -0.84
COL3A1-201ENST00000304636 A0A096LPF7 62 aa9.83□□□□□ -0.84
COL3A1-201ENST00000304636 IGHV3-30-3P0DP02 117 aa9.83□□□□□ -0.84
COL3A1-201ENST00000304636 NBL1P41271 181 aa9.83□□□□□ -0.84
COL3A1-201ENST00000304636 SPTAN1Q13813 2472 aaKnown RBP9.83□□□□□ -0.84
COL3A1-201ENST00000304636 NEXN-AS1Q8NBZ9 246 aa9.83□□□□□ -0.84
COL3A1-201ENST00000304636 JMJD7-PLA2G4BH0Y9G9 81 aa9.82□□□□□ -0.84
COL3A1-201ENST00000304636 MDFICQ9P1T7 246 aa9.82□□□□□ -0.84
COL3A1-201ENST00000304636 MT-ATP8P03928 68 aa9.82□□□□□ -0.84
COL3A1-201ENST00000304636 LINC00643Q86TS7 51 aa9.82□□□□□ -0.84
COL3A1-201ENST00000304636 OPRPNQ99935 248 aaPredicted RBP9.82□□□□□ -0.84
COL3A1-201ENST00000304636 H3BQ85 93 aa9.82□□□□□ -0.84
COL3A1-201ENST00000304636 MYCNOSP40205 109 aa9.82□□□□□ -0.84
COL3A1-201ENST00000304636 BLCAPP62952 87 aa9.82□□□□□ -0.84
COL3A1-201ENST00000304636 DEFB121Q5J5C9 76 aa9.82□□□□□ -0.84
COL3A1-201ENST00000304636 IGHG2P01859 326 aa9.82□□□□□ -0.84
COL3A1-201ENST00000304636 MIAQ16674 131 aa9.82□□□□□ -0.84
COL3A1-201ENST00000304636 APRG1Q8IVJ8 170 aa9.82□□□□□ -0.84
COL3A1-201ENST00000304636 C16orf74Q96GX8 76 aa9.82□□□□□ -0.84
COL3A1-201ENST00000304636 COL6A6A6NMZ7 2263 aa9.82□□□□□ -0.84
COL3A1-201ENST00000304636 TRBV7-3A0A075B6L6 115 aa9.81□□□□□ -0.84
COL3A1-201ENST00000304636 NDUFV3P56181 108 aaKnown RBP9.81□□□□□ -0.84
COL3A1-201ENST00000304636 PRB2P02812 416 aaPredicted RBP9.81□□□□□ -0.84
COL3A1-201ENST00000304636 PSMB8P28062 276 aa9.81□□□□□ -0.84
COL3A1-201ENST00000304636 GPHB5Q86YW7 130 aa9.81□□□□□ -0.84
COL3A1-201ENST00000304636 TMEM131Q92545 1883 aa9.81□□□□□ -0.84
COL3A1-201ENST00000304636 CACNA1GO43497 2377 aa9.81□□□□□ -0.84
COL3A1-201ENST00000304636 IGHV4-38-2P0DP08 117 aa9.81□□□□□ -0.84
COL3A1-201ENST00000304636 Q96MF0 132 aa9.81□□□□□ -0.84
COL3A1-201ENST00000304636 CREBBPQ92793 2442 aa9.81□□□□□ -0.84
COL3A1-201ENST00000304636 HIST2H2BCQ6DN03 193 aa9.8□□□□□ -0.84
COL3A1-201ENST00000304636 NFE4Q86UQ8 179 aa9.8□□□□□ -0.84
COL3A1-201ENST00000304636 SLURP1P55000 103 aa9.8□□□□□ -0.84
COL3A1-201ENST00000304636 MRPL23Q16540 153 aaKnown RBP9.8□□□□□ -0.84
COL3A1-201ENST00000304636 DEFB136Q30KP8 78 aa9.8□□□□□ -0.84
COL3A1-201ENST00000304636 TMEM61Q8N0U2 210 aa9.8□□□□□ -0.84
COL3A1-201ENST00000304636 A0A0J9YXY3 114 aa9.79□□□□□ -0.84
COL3A1-201ENST00000304636 NDUFS5O43920 106 aa9.79□□□□□ -0.84
COL3A1-201ENST00000304636 IGKV2D-26A0A0A0MRZ7 120 aa9.79□□□□□ -0.84
COL3A1-201ENST00000304636 LECT2O14960 151 aa9.79□□□□□ -0.84
COL3A1-201ENST00000304636 IGHV4-61A0A0C4DH41 118 aa9.79□□□□□ -0.84
COL3A1-201ENST00000304636 CLPSL1A2RUU4 121 aa9.79□□□□□ -0.84
COL3A1-201ENST00000304636 DEFB1P60022 68 aa9.79□□□□□ -0.84
COL3A1-201ENST00000304636 C2orf91Q6ZV80 131 aa9.79□□□□□ -0.84
COL3A1-201ENST00000304636 CRYGBP07316 175 aa9.78□□□□□ -0.84
COL3A1-201ENST00000304636 CRIP1P50238 77 aa9.78□□□□□ -0.84
COL3A1-201ENST00000304636 RIF1Q5UIP0 2472 aaKnown RBP9.78□□□□□ -0.84
COL3A1-201ENST00000304636 ZFP36P26651 326 aaKnown RBP9.78□□□□□ -0.84
COL3A1-201ENST00000304636 Q6ZQT7 251 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms