RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 UBE2E1P51965 193 aa10.96□□□□□ -0.66
CDT1-201ENST00000301019 SPXQ9BT56 116 aa10.96□□□□□ -0.66
CDT1-201ENST00000301019 MSRB2Q9Y3D2 182 aa10.96□□□□□ -0.66
CDT1-201ENST00000301019 TRBV6-1A0A0K0K1D8 114 aa10.95□□□□□ -0.66
CDT1-201ENST00000301019 ORMDL2Q53FV1 153 aa10.95□□□□□ -0.66
CDT1-201ENST00000301019 Q6ZS92 163 aa10.95□□□□□ -0.66
CDT1-201ENST00000301019 F6UB75 175 aa10.95□□□□□ -0.66
CDT1-201ENST00000301019 LGALS9O00182 355 aa10.95□□□□□ -0.66
CDT1-201ENST00000301019 TSHBP01222 138 aa10.95□□□□□ -0.66
CDT1-201ENST00000301019 PVRIGQ6DKI7 326 aa10.95□□□□□ -0.66
CDT1-201ENST00000301019 SBSPONQ8IVN8 264 aa10.95□□□□□ -0.66
CDT1-201ENST00000301019 MFAP4P55083 255 aa10.94□□□□□ -0.66
CDT1-201ENST00000301019 SLC25A29Q8N8R3 303 aa10.94□□□□□ -0.66
CDT1-201ENST00000301019 IGLV4-69A0A075B6H9 119 aa10.94□□□□□ -0.66
CDT1-201ENST00000301019 IGLV3-9A0A075B6K5 115 aa10.94□□□□□ -0.66
CDT1-201ENST00000301019 KLRB1Q12918 225 aa10.94□□□□□ -0.66
CDT1-201ENST00000301019 ECSCRQ19T08 205 aa10.94□□□□□ -0.66
CDT1-201ENST00000301019 IGFL2Q6UWQ7 119 aa10.94□□□□□ -0.66
CDT1-201ENST00000301019 ANKRD11Q6UB99 2663 aaPredicted RBP10.94□□□□□ -0.66
CDT1-201ENST00000301019 H7C423 109 aa10.94□□□□□ -0.66
CDT1-201ENST00000301019 PRRC2AP48634 2157 aaKnown RBP10.93□□□□□ -0.66
CDT1-201ENST00000301019 TRAV12-1A0A0B4J245 112 aa10.93□□□□□ -0.66
CDT1-201ENST00000301019 OXLD1Q5BKU9 147 aa10.93□□□□□ -0.66
CDT1-201ENST00000301019 KIR2DL5BQ8NHK3 375 aa10.93□□□□□ -0.66
CDT1-201ENST00000301019 hADV29S1A0JD25 119 aa10.92□□□□□ -0.66
CDT1-201ENST00000301019 SMIM9A6NGZ8 99 aa10.92□□□□□ -0.66
CDT1-201ENST00000301019 TMEM263Q8WUH6 116 aaKnown RBP10.92□□□□□ -0.66
CDT1-201ENST00000301019 CEP295Q9C0D2 2601 aa10.92□□□□□ -0.66
CDT1-201ENST00000301019 PDE6HQ13956 83 aa10.92□□□□□ -0.66
CDT1-201ENST00000301019 LINC01559Q495D7 138 aa10.92□□□□□ -0.66
CDT1-201ENST00000301019 ZNF625Q96I27 306 aaPredicted RBP10.92□□□□□ -0.66
CDT1-201ENST00000301019 CYSTM1Q9H1C7 97 aa10.92□□□□□ -0.66
CDT1-201ENST00000301019 RNASE4P34096 147 aaKnown RBP10.91□□□□□ -0.66
CDT1-201ENST00000301019 DYNLRB1Q9NP97 96 aa10.91□□□□□ -0.66
CDT1-201ENST00000301019 MDFICQ9P1T7 246 aa10.91□□□□□ -0.66
CDT1-201ENST00000301019 BUB1B-PAK6H3BSN5 160 aa10.91□□□□□ -0.66
CDT1-201ENST00000301019 FANCD2OSQ96PS1 177 aa10.91□□□□□ -0.66
CDT1-201ENST00000301019 TRAV17A0A0B4J275 112 aa10.9□□□□□ -0.66
CDT1-201ENST00000301019 NRGNQ92686 78 aa10.9□□□□□ -0.66
CDT1-201ENST00000301019 DKK4Q9UBT3 224 aa10.9□□□□□ -0.66
CDT1-201ENST00000301019 SPG11Q96JI7 2443 aa10.9□□□□□ -0.66
CDT1-201ENST00000301019 TRBV10-2A0A0K0K1G8 114 aa10.9□□□□□ -0.66
CDT1-201ENST00000301019 F8W735 103 aaPredicted RBP10.9□□□□□ -0.66
CDT1-201ENST00000301019 SEM1Q6ZVN7 128 aa10.9□□□□□ -0.66
CDT1-201ENST00000301019 TRAV13-1A0A0B4J241 112 aa10.9□□□□□ -0.67
CDT1-201ENST00000301019 A0A0J9YXV3 536 aa10.9□□□□□ -0.67
CDT1-201ENST00000301019 CLEC19AQ6UXS0 136 aa10.9□□□□□ -0.67
CDT1-201ENST00000301019 CNFNQ9BYD5 112 aa10.9□□□□□ -0.67
CDT1-201ENST00000301019 LINC01546A6NGU7 62 aa10.89□□□□□ -0.67
CDT1-201ENST00000301019 NDUFA7O95182 113 aa10.89□□□□□ -0.67
CDT1-201ENST00000301019 CTSGP08311 255 aa10.89□□□□□ -0.67
CDT1-201ENST00000301019 LINC00574Q9H8X3 128 aa10.89□□□□□ -0.67
CDT1-201ENST00000301019 ANKHD1Q8IWZ3 2542 aaKnown RBP10.89□□□□□ -0.67
CDT1-201ENST00000301019 IGKV3-20P01619 116 aa10.89□□□□□ -0.67
CDT1-201ENST00000301019 CRYGBP07316 175 aa10.89□□□□□ -0.67
CDT1-201ENST00000301019 C5orf47Q569G3 176 aa10.89□□□□□ -0.67
CDT1-201ENST00000301019 DSCR8Q96T75 97 aa10.89□□□□□ -0.67
CDT1-201ENST00000301019 C17orf100A8MU93 164 aa10.88□□□□□ -0.67
CDT1-201ENST00000301019 THBDP07204 575 aa10.88□□□□□ -0.67
CDT1-201ENST00000301019 TMEM178BH3BS89 294 aa10.88□□□□□ -0.67
CDT1-201ENST00000301019 TMEM101Q96IK0 257 aa10.88□□□□□ -0.67
CDT1-201ENST00000301019 C16orf92Q96LL3 132 aa10.88□□□□□ -0.67
CDT1-201ENST00000301019 RHOHQ15669 191 aa10.88□□□□□ -0.67
CDT1-201ENST00000301019 ZNF672Q499Z4 452 aaPredicted RBP10.88□□□□□ -0.67
CDT1-201ENST00000301019 CLPSL1A2RUU4 121 aa10.87□□□□□ -0.67
CDT1-201ENST00000301019 HTN1P15515 57 aa10.87□□□□□ -0.67
CDT1-201ENST00000301019 GATA4P43694 442 aa10.87□□□□□ -0.67
CDT1-201ENST00000301019 C4orf26Q17RF5 130 aa10.87□□□□□ -0.67
CDT1-201ENST00000301019 IGFL3Q6UXB1 125 aa10.87□□□□□ -0.67
CDT1-201ENST00000301019 HRCT1Q6UXD1 115 aa10.87□□□□□ -0.67
CDT1-201ENST00000301019 SMCR5Q8TEV8 140 aa10.87□□□□□ -0.67
CDT1-201ENST00000301019 TLN1Q9Y490 2541 aaKnown RBP10.87□□□□□ -0.67
CDT1-201ENST00000301019 SPTBN4Q9H254 2564 aa10.87□□□□□ -0.67
CDT1-201ENST00000301019 RPL13AP40429 203 aaKnown RBP10.86□□□□□ -0.67
CDT1-201ENST00000301019 C15orf32Q32M92 178 aa10.86□□□□□ -0.67
CDT1-201ENST00000301019 ADAMTSL4-AS1Q5T5F5 129 aa10.86□□□□□ -0.67
CDT1-201ENST00000301019 ICOSQ9Y6W8 199 aa10.86□□□□□ -0.67
CDT1-201ENST00000301019 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.86□□□□□ -0.67
CDT1-201ENST00000301019 RNF152Q8N8N0 203 aa10.86□□□□□ -0.67
CDT1-201ENST00000301019 TMEM126AQ9H061 195 aa10.86□□□□□ -0.67
CDT1-201ENST00000301019 LINC01619G3V211 115 aa10.86□□□□□ -0.67
CDT1-201ENST00000301019 GAGE2AQ6NT46 116 aa10.86□□□□□ -0.67
CDT1-201ENST00000301019 SLC50A1Q9BRV3 221 aa10.86□□□□□ -0.67
CDT1-201ENST00000301019 MUC4Q99102 2169 aa10.85□□□□□ -0.67
CDT1-201ENST00000301019 IGHV3-73A0A0B4J1V6 119 aa10.85□□□□□ -0.67
CDT1-201ENST00000301019 B9A039 149 aa10.85□□□□□ -0.67
CDT1-201ENST00000301019 NBR2O15453 112 aa10.85□□□□□ -0.67
CDT1-201ENST00000301019 BSPH1Q075Z2 132 aa10.85□□□□□ -0.67
CDT1-201ENST00000301019 DPH3P1Q9H4G8 78 aa10.85□□□□□ -0.67
CDT1-201ENST00000301019 PRR30Q53SZ7 412 aaPredicted RBP10.85□□□□□ -0.67
CDT1-201ENST00000301019 C1orf162Q8NEQ5 155 aaPredicted RBP10.85□□□□□ -0.67
CDT1-201ENST00000301019 DNAJC30Q96LL9 226 aa10.85□□□□□ -0.67
CDT1-201ENST00000301019 METTL26Q96S19 204 aa10.85□□□□□ -0.67
CDT1-201ENST00000301019 IGHG3P01860 377 aa10.84□□□□□ -0.67
CDT1-201ENST00000301019 CRYBG3Q68DQ2 2970 aa10.84□□□□□ -0.67
CDT1-201ENST00000301019 SDHAF1A6NFY7 115 aa10.84□□□□□ -0.67
CDT1-201ENST00000301019 NXPH4O95158 308 aa10.84□□□□□ -0.67
CDT1-201ENST00000301019 HOXD3P31249 432 aaPredicted RBP10.84□□□□□ -0.67
CDT1-201ENST00000301019 AMELXQ99217 191 aa10.84□□□□□ -0.67
CDT1-201ENST00000301019 G3V318 75 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms