RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 C11orf21Q9P2W6 132 aa10.21□□□□□ -0.78
CASC4-201ENST00000299957 IGLL5B9A064 214 aa10.21□□□□□ -0.78
CASC4-201ENST00000299957 CRYGBP07316 175 aa10.21□□□□□ -0.78
CASC4-201ENST00000299957 AJUBAQ96IF1 538 aa10.21□□□□□ -0.78
CASC4-201ENST00000299957 CCDC140Q96MF4 163 aa10.21□□□□□ -0.78
CASC4-201ENST00000299957 PCSK5Q92824 1860 aa10.21□□□□□ -0.78
CASC4-201ENST00000299957 TRGV1A0A0A0MS02 117 aa10.2□□□□□ -0.78
CASC4-201ENST00000299957 GAGE12HA6NDE8 117 aa10.2□□□□□ -0.78
CASC4-201ENST00000299957 CKS1BP61024 79 aa10.2□□□□□ -0.78
CASC4-201ENST00000299957 FLNBO75369 2602 aaKnown RBP10.2□□□□□ -0.78
CASC4-201ENST00000299957 PAPPA-AS1Q5QFB9 102 aa10.19□□□□□ -0.78
CASC4-201ENST00000299957 CIRBPQ14011 172 aaKnown RBP10.19□□□□□ -0.78
CASC4-201ENST00000299957 TRAV8-3A0A0A6YYJ7 113 aa10.19□□□□□ -0.78
CASC4-201ENST00000299957 IGHV4-30-2A0A087WSY4 118 aa10.18□□□□□ -0.78
CASC4-201ENST00000299957 TMEM238C9JI98 176 aa10.18□□□□□ -0.78
CASC4-201ENST00000299957 PRM2P04554 102 aa10.18□□□□□ -0.78
CASC4-201ENST00000299957 MSMBP08118 114 aa10.18□□□□□ -0.78
CASC4-201ENST00000299957 PMVKQ15126 192 aa10.18□□□□□ -0.78
CASC4-201ENST00000299957 CEMP1Q6PRD7 247 aaPredicted RBP10.18□□□□□ -0.78
CASC4-201ENST00000299957 DAND5Q8N907 189 aa10.18□□□□□ -0.78
CASC4-201ENST00000299957 LAMA5O15230 3695 aa10.18□□□□□ -0.78
CASC4-201ENST00000299957 A0A0J9YXV3 536 aa10.18□□□□□ -0.78
CASC4-201ENST00000299957 C10orf99Q6UWK7 81 aa10.18□□□□□ -0.78
CASC4-201ENST00000299957 FAM223BA6NKX1 122 aa10.17□□□□□ -0.78
CASC4-201ENST00000299957 RPL35AP18077 110 aaKnown RBP10.17□□□□□ -0.78
CASC4-201ENST00000299957 FAM223AQ8IWN6 122 aa10.17□□□□□ -0.78
CASC4-201ENST00000299957 ANAPC13Q9BS18 74 aa10.17□□□□□ -0.78
CASC4-201ENST00000299957 B4DSR2 109 aa10.17□□□□□ -0.78
CASC4-201ENST00000299957 MDFICQ9P1T7 246 aa10.17□□□□□ -0.78
CASC4-201ENST00000299957 USP24Q9UPU5 2620 aa10.17□□□□□ -0.78
CASC4-201ENST00000299957 LINC01559Q495D7 138 aa10.16□□□□□ -0.78
CASC4-201ENST00000299957 TCTEX1D4Q5JR98 221 aa10.16□□□□□ -0.78
CASC4-201ENST00000299957 USMG5Q96IX5 58 aa10.16□□□□□ -0.78
CASC4-201ENST00000299957 J3QQQ9 107 aa10.16□□□□□ -0.78
CASC4-201ENST00000299957 GATD1Q8NB37 220 aa10.16□□□□□ -0.78
CASC4-201ENST00000299957 TIMM21Q9BVV7 248 aa10.16□□□□□ -0.78
CASC4-201ENST00000299957 C11orf86A6NJI1 115 aa10.16□□□□□ -0.78
CASC4-201ENST00000299957 HTN3P15516 51 aa10.16□□□□□ -0.78
CASC4-201ENST00000299957 TEX29Q8N6K0 151 aa10.16□□□□□ -0.78
CASC4-201ENST00000299957 C20orf173Q96LM9 149 aa10.16□□□□□ -0.78
CASC4-201ENST00000299957 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.16□□□□□ -0.78
CASC4-201ENST00000299957 IGKV2-29A2NJV5 120 aaPredicted RBP10.16□□□□□ -0.78
CASC4-201ENST00000299957 NDUFA4O00483 81 aa10.16□□□□□ -0.78
CASC4-201ENST00000299957 FSTL3O95633 263 aa10.16□□□□□ -0.78
CASC4-201ENST00000299957 TSPAN13O95857 204 aa10.16□□□□□ -0.78
CASC4-201ENST00000299957 IGHV7-4-1A0A0J9YVY3 117 aa10.15□□□□□ -0.78
CASC4-201ENST00000299957 RBAKDNA6NC62 111 aa10.15□□□□□ -0.78
CASC4-201ENST00000299957 IGLC6P0CF74 106 aa10.15□□□□□ -0.78
CASC4-201ENST00000299957 STHQ8IWL8 128 aa10.15□□□□□ -0.78
CASC4-201ENST00000299957 C5orf56Q8N8D9 126 aa10.15□□□□□ -0.78
CASC4-201ENST00000299957 RNF185Q96GF1 192 aa10.15□□□□□ -0.78
CASC4-201ENST00000299957 C19orf84I3L1E1 186 aa10.15□□□□□ -0.78
CASC4-201ENST00000299957 M0R2P5 195 aa10.15□□□□□ -0.78
CASC4-201ENST00000299957 P0DMU3 169 aa10.15□□□□□ -0.78
CASC4-201ENST00000299957 FAM231AP0DMU4 169 aa10.15□□□□□ -0.78
CASC4-201ENST00000299957 FAM231CP0DMU5 169 aa10.15□□□□□ -0.78
CASC4-201ENST00000299957 DEFB112Q30KQ8 113 aa10.15□□□□□ -0.78
CASC4-201ENST00000299957 PRR9Q5T870 116 aa10.15□□□□□ -0.78
CASC4-201ENST00000299957 SUMO4Q6EEV6 95 aa10.15□□□□□ -0.78
CASC4-201ENST00000299957 ZNF493Q6ZR52 646 aa10.15□□□□□ -0.78
CASC4-201ENST00000299957 Q6ZS46 218 aa10.15□□□□□ -0.78
CASC4-201ENST00000299957 APRG1Q8IVJ8 170 aa10.15□□□□□ -0.78
CASC4-201ENST00000299957 ZFP2Q6ZN57 461 aa10.15□□□□□ -0.79
CASC4-201ENST00000299957 PRB1P04280 392 aa10.14□□□□□ -0.79
CASC4-201ENST00000299957 RS1O15537 224 aa10.14□□□□□ -0.79
CASC4-201ENST00000299957 C2orf82Q6UX34 121 aa10.14□□□□□ -0.79
CASC4-201ENST00000299957 FOXI2Q6ZQN5 318 aa10.14□□□□□ -0.79
CASC4-201ENST00000299957 PLEKHB2Q96CS7 222 aa10.14□□□□□ -0.79
CASC4-201ENST00000299957 C20orf78Q9BR46 151 aa10.14□□□□□ -0.79
CASC4-201ENST00000299957 IGHV1OR15-1A0A075B7D0 117 aa10.14□□□□□ -0.79
CASC4-201ENST00000299957 LY6LH3BQJ8 138 aa10.13□□□□□ -0.79
CASC4-201ENST00000299957 EDN2P20800 178 aa10.13□□□□□ -0.79
CASC4-201ENST00000299957 BAALCQ8WXS3 180 aa10.13□□□□□ -0.79
CASC4-201ENST00000299957 RAI1Q7Z5J4 1906 aaPredicted RBP10.13□□□□□ -0.79
CASC4-201ENST00000299957 A0A096LNJ9 63 aa10.13□□□□□ -0.79
CASC4-201ENST00000299957 TRBV7-9A0A0J9YWB2 115 aa10.13□□□□□ -0.79
CASC4-201ENST00000299957 SIVA1O15304 175 aa10.13□□□□□ -0.79
CASC4-201ENST00000299957 MRGPRG-AS1Q2M3A8 158 aa10.13□□□□□ -0.79
CASC4-201ENST00000299957 Q8N1Y9 231 aa10.13□□□□□ -0.79
CASC4-201ENST00000299957 SIRPDQ9H106 197 aa10.12□□□□□ -0.79
CASC4-201ENST00000299957 A4D1N5 150 aa10.12□□□□□ -0.79
CASC4-201ENST00000299957 GAGE12JA6NER3 117 aa10.12□□□□□ -0.79
CASC4-201ENST00000299957 F8W1H4 67 aa10.12□□□□□ -0.79
CASC4-201ENST00000299957 GAGE2BQ13066 116 aa10.12□□□□□ -0.79
CASC4-201ENST00000299957 GAGE4Q13068 117 aa10.12□□□□□ -0.79
CASC4-201ENST00000299957 GAGE5Q13069 117 aa10.12□□□□□ -0.79
CASC4-201ENST00000299957 GAGE2EQ4V326 116 aa10.12□□□□□ -0.79
CASC4-201ENST00000299957 CHCHD5Q9BSY4 110 aa10.12□□□□□ -0.79
CASC4-201ENST00000299957 GAGE2DQ9UEU5 116 aa10.12□□□□□ -0.79
CASC4-201ENST00000299957 TRBV20-1A0A075B6N2 111 aa10.12□□□□□ -0.79
CASC4-201ENST00000299957 C16orf54Q6UWD8 224 aa10.12□□□□□ -0.79
CASC4-201ENST00000299957 PRO1854Q9UHT4 67 aa10.12□□□□□ -0.79
CASC4-201ENST00000299957 TRGV11A0A075B6L2 103 aa10.11□□□□□ -0.79
CASC4-201ENST00000299957 A0A1W2PPR1 153 aa10.11□□□□□ -0.79
CASC4-201ENST00000299957 DNAL4O96015 105 aa10.11□□□□□ -0.79
CASC4-201ENST00000299957 INSL3P51460 131 aa10.11□□□□□ -0.79
CASC4-201ENST00000299957 NSUN5P1Q3KNT7 163 aa10.11□□□□□ -0.79
CASC4-201ENST00000299957 NTN5Q8WTR8 489 aaPredicted RBP10.11□□□□□ -0.79
CASC4-201ENST00000299957 SLURP1P55000 103 aa10.11□□□□□ -0.79
CASC4-201ENST00000299957 LMO4P61968 165 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 479.9 ms