RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 P0DMU3 169 aa10.45□□□□□ -0.74
CHRFAM7A-201ENST00000299847 FAM231AP0DMU4 169 aa10.45□□□□□ -0.74
CHRFAM7A-201ENST00000299847 FAM231CP0DMU5 169 aa10.45□□□□□ -0.74
CHRFAM7A-201ENST00000299847 FXYD2P54710 66 aa10.45□□□□□ -0.74
CHRFAM7A-201ENST00000299847 MDFICQ9P1T7 246 aa10.45□□□□□ -0.74
CHRFAM7A-201ENST00000299847 DAZ2Q13117 558 aaKnown RBP10.45□□□□□ -0.74
CHRFAM7A-201ENST00000299847 DAZ4Q86SG3 579 aaKnown RBP10.45□□□□□ -0.74
CHRFAM7A-201ENST00000299847 DAZ3Q9NR90 486 aaKnown RBP10.45□□□□□ -0.74
CHRFAM7A-201ENST00000299847 Q8N7P7 452 aa10.44□□□□□ -0.74
CHRFAM7A-201ENST00000299847 C14orf132Q9NPU4 83 aa10.44□□□□□ -0.74
CHRFAM7A-201ENST00000299847 UNQ9165/PRO28630Q6UXU0 137 aa10.44□□□□□ -0.74
CHRFAM7A-201ENST00000299847 TMEM61Q8N0U2 210 aa10.44□□□□□ -0.74
CHRFAM7A-201ENST00000299847 TEX22C9J3V5 150 aa10.44□□□□□ -0.74
CHRFAM7A-201ENST00000299847 FUSP35637 526 aaKnown RBP eCLIP10.44□□□□□ -0.74
CHRFAM7A-201ENST00000299847 C10orf105Q8TEF2 133 aa10.44□□□□□ -0.74
CHRFAM7A-201ENST00000299847 KLK12Q9UKR0 248 aa10.44□□□□□ -0.74
CHRFAM7A-201ENST00000299847 CACNA1GO43497 2377 aa10.44□□□□□ -0.74
CHRFAM7A-201ENST00000299847 ROS1P08922 2347 aa10.44□□□□□ -0.74
CHRFAM7A-201ENST00000299847 VSIG2Q96IQ7 327 aa10.44□□□□□ -0.74
CHRFAM7A-201ENST00000299847 TP53TG3Q9ULZ0 132 aa10.43□□□□□ -0.74
CHRFAM7A-201ENST00000299847 WI2-2373I1.2A0A1W2PRP0 233 aa10.43□□□□□ -0.74
CHRFAM7A-201ENST00000299847 KRTAP27-1Q3LI81 207 aa10.42□□□□□ -0.74
CHRFAM7A-201ENST00000299847 CNOT1A5YKK6 2376 aaKnown RBP10.42□□□□□ -0.74
CHRFAM7A-201ENST00000299847 WFDC2Q14508 124 aa10.42□□□□□ -0.74
CHRFAM7A-201ENST00000299847 HIGD2BQ4VC39 106 aa10.42□□□□□ -0.74
CHRFAM7A-201ENST00000299847 DEFB125Q8N687 156 aa10.42□□□□□ -0.74
CHRFAM7A-201ENST00000299847 LYPD6BQ8NI32 183 aa10.42□□□□□ -0.74
CHRFAM7A-201ENST00000299847 NOTCH4Q99466 2003 aa10.42□□□□□ -0.74
CHRFAM7A-201ENST00000299847 TRBV7-3A0A075B6L6 115 aa10.42□□□□□ -0.74
CHRFAM7A-201ENST00000299847 IGLV2-14P01704 120 aa10.42□□□□□ -0.74
CHRFAM7A-201ENST00000299847 ODF3L1Q8IXM7 274 aa10.42□□□□□ -0.74
CHRFAM7A-201ENST00000299847 LECT2O14960 151 aa10.41□□□□□ -0.74
CHRFAM7A-201ENST00000299847 FAM167A-AS1Q96KT0 104 aa10.41□□□□□ -0.74
CHRFAM7A-201ENST00000299847 RNF183Q96D59 192 aa10.41□□□□□ -0.74
CHRFAM7A-201ENST00000299847 A0A1W2PNU3 283 aaPredicted RBP10.41□□□□□ -0.74
CHRFAM7A-201ENST00000299847 A0A1B0GX51 115 aa10.41□□□□□ -0.74
CHRFAM7A-201ENST00000299847 TOMM6Q96B49 74 aa10.41□□□□□ -0.74
CHRFAM7A-201ENST00000299847 NREPQ16612 68 aa10.4□□□□□ -0.74
CHRFAM7A-201ENST00000299847 SIRPDQ9H106 197 aa10.4□□□□□ -0.74
CHRFAM7A-201ENST00000299847 FAM236AA0A1B0GUQ0 79 aa10.4□□□□□ -0.75
CHRFAM7A-201ENST00000299847 FAM236BA0A1B0GV22 79 aa10.4□□□□□ -0.75
CHRFAM7A-201ENST00000299847 LENEPQ9Y5L5 61 aa10.4□□□□□ -0.75
CHRFAM7A-201ENST00000299847 FANCD2OSQ96PS1 177 aa10.39□□□□□ -0.75
CHRFAM7A-201ENST00000299847 ADAMTS9Q9P2N4 1935 aa10.39□□□□□ -0.75
CHRFAM7A-201ENST00000299847 WNK2Q9Y3S1 2297 aa10.39□□□□□ -0.75
CHRFAM7A-201ENST00000299847 LINC01545Q5VT33 79 aa10.39□□□□□ -0.75
CHRFAM7A-201ENST00000299847 TM2D2Q9BX73 214 aa10.39□□□□□ -0.75
CHRFAM7A-201ENST00000299847 LGALS9O00182 355 aa10.39□□□□□ -0.75
CHRFAM7A-201ENST00000299847 NDUFA1O15239 70 aa10.39□□□□□ -0.75
CHRFAM7A-201ENST00000299847 TMEM258P61165 79 aa10.39□□□□□ -0.75
CHRFAM7A-201ENST00000299847 NFE4Q86UQ8 179 aa10.39□□□□□ -0.75
CHRFAM7A-201ENST00000299847 RNF138Q8WVD3 245 aa10.39□□□□□ -0.75
CHRFAM7A-201ENST00000299847 IGKV2-24A0A0C4DH68 120 aa10.39□□□□□ -0.75
CHRFAM7A-201ENST00000299847 C4orf3Q8WVX3 66 aa10.39□□□□□ -0.75
CHRFAM7A-201ENST00000299847 NCOR1O75376 2440 aa10.39□□□□□ -0.75
CHRFAM7A-201ENST00000299847 TRAV26-1A0A087WT03 109 aa10.39□□□□□ -0.75
CHRFAM7A-201ENST00000299847 LINC01548A6NM66 108 aa10.39□□□□□ -0.75
CHRFAM7A-201ENST00000299847 MIR7-3HGQ8N6C7 128 aa10.39□□□□□ -0.75
CHRFAM7A-201ENST00000299847 ABCA4P78363 2273 aa10.38□□□□□ -0.75
CHRFAM7A-201ENST00000299847 PSMB8P28062 276 aa10.38□□□□□ -0.75
CHRFAM7A-201ENST00000299847 NACAE9PAV3 2078 aa10.38□□□□□ -0.75
CHRFAM7A-201ENST00000299847 A0A0B4J2C4 111 aa10.38□□□□□ -0.75
CHRFAM7A-201ENST00000299847 KIR2DL5BA0A0G2JN68 375 aa10.38□□□□□ -0.75
CHRFAM7A-201ENST00000299847 KIR2DL5BA0A0G2JPC4 375 aa10.38□□□□□ -0.75
CHRFAM7A-201ENST00000299847 C11orf86A6NJI1 115 aa10.38□□□□□ -0.75
CHRFAM7A-201ENST00000299847 KIR2DL5AQ8N109 375 aa10.38□□□□□ -0.75
CHRFAM7A-201ENST00000299847 Q8NFD4 153 aa10.38□□□□□ -0.75
CHRFAM7A-201ENST00000299847 SPAG11BQ08648 103 aa10.38□□□□□ -0.75
CHRFAM7A-201ENST00000299847 MSMPQ1L6U9 139 aa10.38□□□□□ -0.75
CHRFAM7A-201ENST00000299847 IGFL2Q6UWQ7 119 aa10.38□□□□□ -0.75
CHRFAM7A-201ENST00000299847 IGKV2D-26A0A0A0MRZ7 120 aa10.37□□□□□ -0.75
CHRFAM7A-201ENST00000299847 H0Y9J4 135 aa10.37□□□□□ -0.75
CHRFAM7A-201ENST00000299847 PTH2Q96A98 100 aa10.37□□□□□ -0.75
CHRFAM7A-201ENST00000299847 LOXL1Q08397 574 aaPredicted RBP10.37□□□□□ -0.75
CHRFAM7A-201ENST00000299847 NUP210Q8TEM1 1887 aaPredicted RBP10.37□□□□□ -0.75
CHRFAM7A-201ENST00000299847 LINC01620Q4KN68 170 aa10.37□□□□□ -0.75
CHRFAM7A-201ENST00000299847 LRCOL1A6NCL2 159 aa10.36□□□□□ -0.75
CHRFAM7A-201ENST00000299847 Q6ZUT4 128 aa10.36□□□□□ -0.75
CHRFAM7A-201ENST00000299847 A0A096LNI7 61 aa10.36□□□□□ -0.75
CHRFAM7A-201ENST00000299847 PLXNB3Q9ULL4 1909 aa10.36□□□□□ -0.75
CHRFAM7A-201ENST00000299847 ARHGAP21Q5T5U3 1957 aa10.35□□□□□ -0.75
CHRFAM7A-201ENST00000299847 DNAJC9-AS1A6NH13 148 aa10.35□□□□□ -0.75
CHRFAM7A-201ENST00000299847 NDUFB1O75438 58 aa10.35□□□□□ -0.75
CHRFAM7A-201ENST00000299847 RNF152Q8N8N0 203 aa10.35□□□□□ -0.75
CHRFAM7A-201ENST00000299847 ACACAQ13085 2346 aa10.35□□□□□ -0.75
CHRFAM7A-201ENST00000299847 FAM110AQ9BQ89 295 aa10.34□□□□□ -0.75
CHRFAM7A-201ENST00000299847 MAP6D1Q9H9H5 199 aa10.34□□□□□ -0.75
CHRFAM7A-201ENST00000299847 ACYP1P07311 99 aa10.34□□□□□ -0.75
CHRFAM7A-201ENST00000299847 ZNF80P51504 273 aaPredicted RBP10.34□□□□□ -0.75
CHRFAM7A-201ENST00000299847 DIRC1Q969H9 104 aa10.34□□□□□ -0.75
CHRFAM7A-201ENST00000299847 TP73-AS1Q9UF72 201 aa10.33□□□□□ -0.76
CHRFAM7A-201ENST00000299847 H0YGX0 51 aa10.33□□□□□ -0.76
CHRFAM7A-201ENST00000299847 TAX1BP3O14907 124 aa10.33□□□□□ -0.76
CHRFAM7A-201ENST00000299847 SMIM20Q8N5G0 67 aa10.33□□□□□ -0.76
CHRFAM7A-201ENST00000299847 C19orf84I3L1E1 186 aa10.32□□□□□ -0.76
CHRFAM7A-201ENST00000299847 GTF3C1Q12789 2109 aa10.32□□□□□ -0.76
CHRFAM7A-201ENST00000299847 C4orf48Q5BLP8 95 aa10.32□□□□□ -0.76
CHRFAM7A-201ENST00000299847 LINC00269Q8N2A0 174 aa10.32□□□□□ -0.76
CHRFAM7A-201ENST00000299847 SMAD5-AS1Q9Y6J3 95 aa10.32□□□□□ -0.76
CHRFAM7A-201ENST00000299847 ABCA1O95477 2261 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms