RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 LINC00477Q96M19 166 aa11.38□□□□□ -0.59
SPIDR-201ENST00000297423 CTSGP08311 255 aa11.38□□□□□ -0.59
SPIDR-201ENST00000297423 HOXB4P17483 251 aaPredicted RBP11.38□□□□□ -0.59
SPIDR-201ENST00000297423 FANCD2OSQ96PS1 177 aa11.38□□□□□ -0.59
SPIDR-201ENST00000297423 SPXQ9BT56 116 aa11.38□□□□□ -0.59
SPIDR-201ENST00000297423 OVOL3O00110 214 aa11.38□□□□□ -0.59
SPIDR-201ENST00000297423 NDUFV3P56181 108 aaKnown RBP11.38□□□□□ -0.59
SPIDR-201ENST00000297423 RNASE13Q5GAN3 156 aaKnown RBP11.38□□□□□ -0.59
SPIDR-201ENST00000297423 JPT2Q9H910 190 aa11.38□□□□□ -0.59
SPIDR-201ENST00000297423 LINC01559Q495D7 138 aa11.37□□□□□ -0.59
SPIDR-201ENST00000297423 AJUBAQ96IF1 538 aa11.37□□□□□ -0.59
SPIDR-201ENST00000297423 TRBV6-1A0A0K0K1D8 114 aa11.37□□□□□ -0.59
SPIDR-201ENST00000297423 PAX8Q06710 450 aa11.37□□□□□ -0.59
SPIDR-201ENST00000297423 C10orf126Q8N4M7 172 aa11.37□□□□□ -0.59
SPIDR-201ENST00000297423 ITLN2Q8WWU7 325 aaPredicted RBP11.37□□□□□ -0.59
SPIDR-201ENST00000297423 DUX3Q96PT4 197 aa11.37□□□□□ -0.59
SPIDR-201ENST00000297423 DPH3P1Q9H4G8 78 aa11.37□□□□□ -0.59
SPIDR-201ENST00000297423 TRAV8-3A0A0A6YYJ7 113 aa11.37□□□□□ -0.59
SPIDR-201ENST00000297423 RASL10AQ92737 203 aa11.37□□□□□ -0.59
SPIDR-201ENST00000297423 VCX2Q9H322 139 aa11.37□□□□□ -0.59
SPIDR-201ENST00000297423 RS1O15537 224 aa11.36□□□□□ -0.59
SPIDR-201ENST00000297423 CFC1BP0CG36 223 aa11.36□□□□□ -0.59
SPIDR-201ENST00000297423 CFC1P0CG37 223 aa11.36□□□□□ -0.59
SPIDR-201ENST00000297423 NRACQ8N912 160 aa11.36□□□□□ -0.59
SPIDR-201ENST00000297423 IGLV1-47P01700 117 aa11.36□□□□□ -0.59
SPIDR-201ENST00000297423 GATD1Q8NB37 220 aa11.36□□□□□ -0.59
SPIDR-201ENST00000297423 J3QQQ9 107 aa11.35□□□□□ -0.59
SPIDR-201ENST00000297423 SLC50A1Q9BRV3 221 aa11.35□□□□□ -0.59
SPIDR-201ENST00000297423 MRPS12O15235 138 aaKnown RBP11.35□□□□□ -0.59
SPIDR-201ENST00000297423 SPENQ96T58 3664 aaKnown RBP11.35□□□□□ -0.59
SPIDR-201ENST00000297423 IGHV3-73A0A0B4J1V6 119 aa11.35□□□□□ -0.59
SPIDR-201ENST00000297423 Q8N1Y9 231 aa11.35□□□□□ -0.59
SPIDR-201ENST00000297423 CHCHD5Q9BSY4 110 aa11.35□□□□□ -0.59
SPIDR-201ENST00000297423 CD7P09564 240 aa11.35□□□□□ -0.59
SPIDR-201ENST00000297423 COX6CP09669 75 aa11.34□□□□□ -0.59
SPIDR-201ENST00000297423 LY6EQ16553 131 aa11.34□□□□□ -0.59
SPIDR-201ENST00000297423 CFAP161Q6P656 301 aa11.34□□□□□ -0.59
SPIDR-201ENST00000297423 MUSTN1Q8IVN3 82 aa11.34□□□□□ -0.59
SPIDR-201ENST00000297423 CRYGBP07316 175 aa11.34□□□□□ -0.59
SPIDR-201ENST00000297423 TMEM219Q86XT9 240 aa11.34□□□□□ -0.59
SPIDR-201ENST00000297423 ATP6V0E2Q8NHE4 81 aa11.34□□□□□ -0.59
SPIDR-201ENST00000297423 KAAG1Q9UBP8 84 aa11.34□□□□□ -0.59
SPIDR-201ENST00000297423 COL12A1Q99715 3063 aa11.34□□□□□ -0.59
SPIDR-201ENST00000297423 RBAKDNA6NC62 111 aa11.33□□□□□ -0.6
SPIDR-201ENST00000297423 H3BMM0 161 aa11.33□□□□□ -0.6
SPIDR-201ENST00000297423 MRPL23Q16540 153 aaKnown RBP11.33□□□□□ -0.6
SPIDR-201ENST00000297423 NEXN-AS1Q8NBZ9 246 aa11.33□□□□□ -0.6
SPIDR-201ENST00000297423 UBE2WQ96B02 151 aa11.33□□□□□ -0.6
SPIDR-201ENST00000297423 A0A0J9YY99 117 aa11.33□□□□□ -0.6
SPIDR-201ENST00000297423 RPL32P62910 135 aaKnown RBP11.33□□□□□ -0.6
SPIDR-201ENST00000297423 ATXN8Q156A1 80 aa11.33□□□□□ -0.6
SPIDR-201ENST00000297423 ZNF625Q96I27 306 aaPredicted RBP11.33□□□□□ -0.6
SPIDR-201ENST00000297423 CITED1Q99966 193 aa11.33□□□□□ -0.6
SPIDR-201ENST00000297423 IGLV11-55A0A075B6I3 123 aa11.32□□□□□ -0.6
SPIDR-201ENST00000297423 PMVKQ15126 192 aa11.32□□□□□ -0.6
SPIDR-201ENST00000297423 PIFOQ8TCI5 191 aa11.32□□□□□ -0.6
SPIDR-201ENST00000297423 TRAV21A0A0B4J279 112 aa11.32□□□□□ -0.6
SPIDR-201ENST00000297423 TOMM6Q96B49 74 aa11.31□□□□□ -0.6
SPIDR-201ENST00000297423 IGLV2-18A0A075B6J9 118 aa11.31□□□□□ -0.6
SPIDR-201ENST00000297423 CLEC2BQ92478 149 aa11.31□□□□□ -0.6
SPIDR-201ENST00000297423 LRBAP50851 2863 aa11.31□□□□□ -0.6
SPIDR-201ENST00000297423 SDHAF1A6NFY7 115 aa11.31□□□□□ -0.6
SPIDR-201ENST00000297423 BUB3O43684 328 aa11.3□□□□□ -0.6
SPIDR-201ENST00000297423 LINC01620Q4KN68 170 aa11.3□□□□□ -0.6
SPIDR-201ENST00000297423 DAND5Q8N907 189 aa11.3□□□□□ -0.6
SPIDR-201ENST00000297423 ATP6V0E1O15342 81 aa11.3□□□□□ -0.6
SPIDR-201ENST00000297423 PRR9Q5T870 116 aa11.3□□□□□ -0.6
SPIDR-201ENST00000297423 IGHG4P01861 327 aa11.29□□□□□ -0.6
SPIDR-201ENST00000297423 PRB1P04280 392 aa11.29□□□□□ -0.6
SPIDR-201ENST00000297423 TRAV12-1A0A0B4J245 112 aa11.29□□□□□ -0.6
SPIDR-201ENST00000297423 C19orf84I3L1E1 186 aa11.29□□□□□ -0.6
SPIDR-201ENST00000297423 TSPEAR-AS2P59090 65 aa11.29□□□□□ -0.6
SPIDR-201ENST00000297423 IGHV7-4-1A0A0J9YVY3 117 aa11.28□□□□□ -0.6
SPIDR-201ENST00000297423 VMO1Q7Z5L0 202 aa11.28□□□□□ -0.6
SPIDR-201ENST00000297423 A0A0J9YXV3 536 aa11.28□□□□□ -0.6
SPIDR-201ENST00000297423 PAPPA-AS1Q5QFB9 102 aa11.28□□□□□ -0.6
SPIDR-201ENST00000297423 Q6ZSV7 163 aa11.28□□□□□ -0.6
SPIDR-201ENST00000297423 UBE2D1P51668 147 aa11.28□□□□□ -0.6
SPIDR-201ENST00000297423 EEF1AKMT3Q96AZ1 226 aa11.28□□□□□ -0.6
SPIDR-201ENST00000297423 DUX5Q96PT3 197 aa11.28□□□□□ -0.6
SPIDR-201ENST00000297423 PF4V1P10720 104 aa11.27□□□□□ -0.61
SPIDR-201ENST00000297423 ACANP16112 2415 aa11.27□□□□□ -0.61
SPIDR-201ENST00000297423 M0R2P5 195 aa11.27□□□□□ -0.61
SPIDR-201ENST00000297423 ZNF876PQ49A33 203 aa11.26□□□□□ -0.61
SPIDR-201ENST00000297423 ZNF580Q9UK33 172 aa11.26□□□□□ -0.61
SPIDR-201ENST00000297423 TRAV12-2A0A075B6T6 113 aa11.26□□□□□ -0.61
SPIDR-201ENST00000297423 UBE2D3P61077 147 aa11.26□□□□□ -0.61
SPIDR-201ENST00000297423 UBE2D2P62837 147 aa11.26□□□□□ -0.61
SPIDR-201ENST00000297423 C9orf153Q5TBE3 101 aa11.26□□□□□ -0.61
SPIDR-201ENST00000297423 RHODO00212 210 aa11.26□□□□□ -0.61
SPIDR-201ENST00000297423 VCYO14598 125 aa11.26□□□□□ -0.61
SPIDR-201ENST00000297423 TNFRSF13BO14836 293 aaPredicted RBP11.26□□□□□ -0.61
SPIDR-201ENST00000297423 FAM236AA0A1B0GUQ0 79 aa11.25□□□□□ -0.61
SPIDR-201ENST00000297423 FAM236BA0A1B0GV22 79 aa11.25□□□□□ -0.61
SPIDR-201ENST00000297423 IGHV3-30P01768 117 aa11.25□□□□□ -0.61
SPIDR-201ENST00000297423 IGHV3-30-5P0DP03 117 aa11.25□□□□□ -0.61
SPIDR-201ENST00000297423 F8W735 103 aaPredicted RBP11.25□□□□□ -0.61
SPIDR-201ENST00000297423 ELANEP08246 267 aa11.25□□□□□ -0.61
SPIDR-201ENST00000297423 C11orf71Q6IPW1 123 aa11.25□□□□□ -0.61
SPIDR-201ENST00000297423 C8orf31Q8N9H6 132 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms