RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 LINC01545Q5VT33 79 aa9.93□□□□□ -0.82
CHMP4C-201ENST00000297265 PET117Q6UWS5 81 aa9.93□□□□□ -0.82
CHMP4C-201ENST00000297265 NDUFA11Q86Y39 141 aa9.93□□□□□ -0.82
CHMP4C-201ENST00000297265 C19orf73Q9NVV2 129 aa9.93□□□□□ -0.82
CHMP4C-201ENST00000297265 A0A087WWL8 130 aa9.93□□□□□ -0.82
CHMP4C-201ENST00000297265 FCER1GP30273 86 aa9.93□□□□□ -0.82
CHMP4C-201ENST00000297265 NDUFAF3Q9BU61 184 aa9.93□□□□□ -0.82
CHMP4C-201ENST00000297265 SPATA45Q537H7 98 aa9.92□□□□□ -0.82
CHMP4C-201ENST00000297265 TRPT1Q86TN4 253 aaKnown RBP9.92□□□□□ -0.82
CHMP4C-201ENST00000297265 TRAV9-2A0A087WT02 112 aa9.91□□□□□ -0.82
CHMP4C-201ENST00000297265 CBY3A6NI87 242 aa9.91□□□□□ -0.82
CHMP4C-201ENST00000297265 TCAPO15273 167 aa9.91□□□□□ -0.82
CHMP4C-201ENST00000297265 MGPP08493 103 aa9.91□□□□□ -0.82
CHMP4C-201ENST00000297265 IGLL1P15814 213 aa9.91□□□□□ -0.82
CHMP4C-201ENST00000297265 SUMO2P61956 95 aaKnown RBP9.91□□□□□ -0.82
CHMP4C-201ENST00000297265 BEAN1Q3B7T3 259 aa9.91□□□□□ -0.82
CHMP4C-201ENST00000297265 C20orf78Q9BR46 151 aa9.91□□□□□ -0.82
CHMP4C-201ENST00000297265 SMIM2Q9BVW6 85 aa9.91□□□□□ -0.82
CHMP4C-201ENST00000297265 TRGV11A0A075B6L2 103 aa9.91□□□□□ -0.82
CHMP4C-201ENST00000297265 OR11H12B2RN74 326 aa9.91□□□□□ -0.82
CHMP4C-201ENST00000297265 TMEM158Q8WZ71 300 aa9.91□□□□□ -0.82
CHMP4C-201ENST00000297265 PMCHL2Q9BQD1 86 aa9.91□□□□□ -0.82
CHMP4C-201ENST00000297265 LINC00467Q9BRT7 94 aa9.91□□□□□ -0.82
CHMP4C-201ENST00000297265 H0Y8G0 127 aa9.9□□□□□ -0.82
CHMP4C-201ENST00000297265 HTN1P15515 57 aa9.9□□□□□ -0.82
CHMP4C-201ENST00000297265 CTAG1AP78358 180 aa9.9□□□□□ -0.82
CHMP4C-201ENST00000297265 DEFA6Q01524 100 aa9.9□□□□□ -0.82
CHMP4C-201ENST00000297265 ZNF876PQ49A33 203 aa9.9□□□□□ -0.82
CHMP4C-201ENST00000297265 SUMO4Q6EEV6 95 aa9.9□□□□□ -0.82
CHMP4C-201ENST00000297265 LINC00482Q8N8I6 264 aa9.9□□□□□ -0.82
CHMP4C-201ENST00000297265 C11orf72Q8NBR9 251 aa9.9□□□□□ -0.82
CHMP4C-201ENST00000297265 SPATA3Q8NHX4 192 aa9.9□□□□□ -0.82
CHMP4C-201ENST00000297265 MIEN1Q9BRT3 115 aa9.9□□□□□ -0.82
CHMP4C-201ENST00000297265 GIG44P09565 113 aaPredicted RBP9.89□□□□□ -0.83
CHMP4C-201ENST00000297265 IGLC3P0DOY3 106 aa9.89□□□□□ -0.83
CHMP4C-201ENST00000297265 LAGE3Q14657 143 aa9.89□□□□□ -0.83
CHMP4C-201ENST00000297265 ZNF705AQ6ZN79 300 aaPredicted RBP9.89□□□□□ -0.83
CHMP4C-201ENST00000297265 C1orf158Q8N1D5 194 aa9.89□□□□□ -0.83
CHMP4C-201ENST00000297265 IFI27L1Q96BM0 104 aa9.89□□□□□ -0.83
CHMP4C-201ENST00000297265 FAM110AQ9BQ89 295 aa9.89□□□□□ -0.83
CHMP4C-201ENST00000297265 WFDC10AQ9H1F0 79 aa9.89□□□□□ -0.83
CHMP4C-201ENST00000297265 NACAE9PAV3 2078 aa9.89□□□□□ -0.83
CHMP4C-201ENST00000297265 POLR2KP53803 58 aaKnown RBP9.89□□□□□ -0.83
CHMP4C-201ENST00000297265 MORN3Q6PF18 240 aaPredicted RBP9.89□□□□□ -0.83
CHMP4C-201ENST00000297265 STHQ8IWL8 128 aa9.89□□□□□ -0.83
CHMP4C-201ENST00000297265 SYT8Q8NBV8 401 aa9.89□□□□□ -0.83
CHMP4C-201ENST00000297265 XCL2Q9UBD3 114 aa9.89□□□□□ -0.83
CHMP4C-201ENST00000297265 F8P00451 2351 aa9.88□□□□□ -0.83
CHMP4C-201ENST00000297265 hDV102S1A0JD36 115 aa9.88□□□□□ -0.83
CHMP4C-201ENST00000297265 M0QY20 66 aa9.88□□□□□ -0.83
CHMP4C-201ENST00000297265 SMIM17P0DL12 118 aa9.88□□□□□ -0.83
CHMP4C-201ENST00000297265 C18orf15Q96N68 181 aa9.88□□□□□ -0.83
CHMP4C-201ENST00000297265 AZU1P20160 251 aa9.87□□□□□ -0.83
CHMP4C-201ENST00000297265 FAM74A4Q5TZK3 123 aa9.87□□□□□ -0.83
CHMP4C-201ENST00000297265 UFSP1Q6NVU6 142 aa9.87□□□□□ -0.83
CHMP4C-201ENST00000297265 LINC01587Q99440 93 aa9.87□□□□□ -0.83
CHMP4C-201ENST00000297265 TRRAPQ9Y4A5 3859 aa9.87□□□□□ -0.83
CHMP4C-201ENST00000297265 C20orf202A1L168 122 aa9.87□□□□□ -0.83
CHMP4C-201ENST00000297265 INSP01308 110 aa9.87□□□□□ -0.83
CHMP4C-201ENST00000297265 RPL32P62910 135 aaKnown RBP9.87□□□□□ -0.83
CHMP4C-201ENST00000297265 LGALS9BQ3B8N2 356 aa9.87□□□□□ -0.83
CHMP4C-201ENST00000297265 LGALS9CQ6DKI2 356 aa9.87□□□□□ -0.83
CHMP4C-201ENST00000297265 TEP1Q99973 2627 aaKnown RBP9.86□□□□□ -0.83
CHMP4C-201ENST00000297265 PPP1R17O96001 155 aa9.86□□□□□ -0.83
CHMP4C-201ENST00000297265 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.86□□□□□ -0.83
CHMP4C-201ENST00000297265 PTH2Q96A98 100 aa9.86□□□□□ -0.83
CHMP4C-201ENST00000297265 CSTL1Q9H114 145 aa9.86□□□□□ -0.83
CHMP4C-201ENST00000297265 ATRQ13535 2644 aa9.86□□□□□ -0.83
CHMP4C-201ENST00000297265 TRBV6-5A0A0K0K1A5 114 aa9.85□□□□□ -0.83
CHMP4C-201ENST00000297265 F5H697 171 aa9.85□□□□□ -0.83
CHMP4C-201ENST00000297265 CMC4P56277 68 aaPredicted RBP9.85□□□□□ -0.83
CHMP4C-201ENST00000297265 NEGR1Q7Z3B1 354 aa9.85□□□□□ -0.83
CHMP4C-201ENST00000297265 K7EMI3 77 aa9.85□□□□□ -0.83
CHMP4C-201ENST00000297265 M0R2P5 195 aa9.85□□□□□ -0.83
CHMP4C-201ENST00000297265 PIK3CD-AS1Q5SR53 167 aa9.85□□□□□ -0.83
CHMP4C-201ENST00000297265 CITED1Q99966 193 aa9.85□□□□□ -0.83
CHMP4C-201ENST00000297265 PF4P02776 101 aa9.84□□□□□ -0.83
CHMP4C-201ENST00000297265 IL17DQ8TAD2 202 aa9.84□□□□□ -0.83
CHMP4C-201ENST00000297265 ZMAT4Q9H898 229 aa9.84□□□□□ -0.83
CHMP4C-201ENST00000297265 DKK2Q9UBU2 259 aa9.84□□□□□ -0.83
CHMP4C-201ENST00000297265 NOTCH3Q9UM47 2321 aa9.83□□□□□ -0.84
CHMP4C-201ENST00000297265 TRBV27A0A0K0K1C4 114 aa9.83□□□□□ -0.84
CHMP4C-201ENST00000297265 ZNF415Q09FC8 603 aa9.83□□□□□ -0.84
CHMP4C-201ENST00000297265 ODF1Q14990 250 aa9.83□□□□□ -0.84
CHMP4C-201ENST00000297265 ORMDL2Q53FV1 153 aa9.83□□□□□ -0.84
CHMP4C-201ENST00000297265 CSNK1G2-AS1Q8NCQ2 148 aa9.83□□□□□ -0.84
CHMP4C-201ENST00000297265 TOMM6Q96B49 74 aa9.83□□□□□ -0.84
CHMP4C-201ENST00000297265 SNHG12Q9BXW3 62 aa9.83□□□□□ -0.84
CHMP4C-201ENST00000297265 ST20Q9HBF5 79 aa9.83□□□□□ -0.84
CHMP4C-201ENST00000297265 UQCR10Q9UDW1 63 aa9.83□□□□□ -0.84
CHMP4C-201ENST00000297265 TP73-AS1Q9UF72 201 aa9.83□□□□□ -0.84
CHMP4C-201ENST00000297265 SDHAF1A6NFY7 115 aa9.83□□□□□ -0.84
CHMP4C-201ENST00000297265 NUDT3O95989 172 aa9.83□□□□□ -0.84
CHMP4C-201ENST00000297265 ZNF56Q15929 161 aa9.83□□□□□ -0.84
CHMP4C-201ENST00000297265 DEFB104AQ8WTQ1 72 aa9.83□□□□□ -0.84
CHMP4C-201ENST00000297265 EDA2RQ9HAV5 297 aa9.83□□□□□ -0.84
CHMP4C-201ENST00000297265 GOLT1BQ9Y3E0 138 aa9.83□□□□□ -0.84
CHMP4C-201ENST00000297265 EREGO14944 169 aa9.82□□□□□ -0.84
CHMP4C-201ENST00000297265 NUTF2P61970 127 aaKnown RBP9.82□□□□□ -0.84
CHMP4C-201ENST00000297265 CFAP126Q5VTH2 177 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms