RNA–Protein interactions for RNA: ENST00000295522.3

CLDN1-201, Transcript of claudin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-201ENST00000295522 LGALS9O00182 355 aa7.76□□□□□ -1.17
CLDN1-201ENST00000295522 PAPPA-AS1Q5QFB9 102 aa7.76□□□□□ -1.17
CLDN1-201ENST00000295522 ASCL5Q7RTU5 278 aa7.76□□□□□ -1.17
CLDN1-201ENST00000295522 FANCD2OSQ96PS1 177 aa7.76□□□□□ -1.17
CLDN1-201ENST00000295522 JPT2Q9H910 190 aa7.76□□□□□ -1.17
CLDN1-201ENST00000295522 ZNF580Q9UK33 172 aa7.76□□□□□ -1.17
CLDN1-201ENST00000295522 SVEP1Q4LDE5 3571 aa7.76□□□□□ -1.17
CLDN1-201ENST00000295522 CTSGP08311 255 aa7.76□□□□□ -1.17
CLDN1-201ENST00000295522 CEMP1Q6PRD7 247 aaPredicted RBP7.76□□□□□ -1.17
CLDN1-201ENST00000295522 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.76□□□□□ -1.17
CLDN1-201ENST00000295522 SEM1Q6ZVN7 128 aa7.75□□□□□ -1.17
CLDN1-201ENST00000295522 SBSPONQ8IVN8 264 aa7.75□□□□□ -1.17
CLDN1-201ENST00000295522 NACAE9PAV3 2078 aa7.75□□□□□ -1.17
CLDN1-201ENST00000295522 IGHG3P01860 377 aa7.75□□□□□ -1.17
CLDN1-201ENST00000295522 UBE2E1P51965 193 aa7.75□□□□□ -1.17
CLDN1-201ENST00000295522 RNASE13Q5GAN3 156 aaKnown RBP7.75□□□□□ -1.17
CLDN1-201ENST00000295522 ZNRF2Q8NHG8 242 aa7.75□□□□□ -1.17
CLDN1-201ENST00000295522 TMEM126AQ9H061 195 aa7.75□□□□□ -1.17
CLDN1-201ENST00000295522 CEP295Q9C0D2 2601 aa7.75□□□□□ -1.17
CLDN1-201ENST00000295522 LY6HO94772 140 aa7.75□□□□□ -1.17
CLDN1-201ENST00000295522 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.74□□□□□ -1.17
CLDN1-201ENST00000295522 M0R2P5 195 aa7.74□□□□□ -1.17
CLDN1-201ENST00000295522 CRYGDP07320 174 aa7.74□□□□□ -1.17
CLDN1-201ENST00000295522 PRR9Q5T870 116 aa7.74□□□□□ -1.17
CLDN1-201ENST00000295522 DAND5Q8N907 189 aa7.74□□□□□ -1.17
CLDN1-201ENST00000295522 MSRB2Q9Y3D2 182 aa7.74□□□□□ -1.17
CLDN1-201ENST00000295522 CSDC2Q9Y534 153 aaKnown RBP7.74□□□□□ -1.17
CLDN1-201ENST00000295522 IGLV4-69A0A075B6H9 119 aa7.74□□□□□ -1.17
CLDN1-201ENST00000295522 F6UB75 175 aa7.74□□□□□ -1.17
CLDN1-201ENST00000295522 NPFFO15130 113 aa7.74□□□□□ -1.17
CLDN1-201ENST00000295522 IGLV1-47P01700 117 aa7.74□□□□□ -1.17
CLDN1-201ENST00000295522 HERVK_113P63121 156 aa7.74□□□□□ -1.17
CLDN1-201ENST00000295522 TMEM263Q8WUH6 116 aaKnown RBP7.73□□□□□ -1.17
CLDN1-201ENST00000295522 ZNF292O60281 2723 aa7.73□□□□□ -1.17
CLDN1-201ENST00000295522 TLN1Q9Y490 2541 aaKnown RBP7.73□□□□□ -1.17
CLDN1-201ENST00000295522 IGLV11-55A0A075B6I3 123 aa7.73□□□□□ -1.17
CLDN1-201ENST00000295522 SDHAF1A6NFY7 115 aa7.73□□□□□ -1.17
CLDN1-201ENST00000295522 METTL26Q96S19 204 aa7.73□□□□□ -1.17
CLDN1-201ENST00000295522 DPM3Q9P2X0 92 aa7.73□□□□□ -1.17
CLDN1-201ENST00000295522 A0A0J9YXV3 536 aa7.73□□□□□ -1.17
CLDN1-201ENST00000295522 IGKV3-20P01619 116 aa7.73□□□□□ -1.17
CLDN1-201ENST00000295522 ICOSQ9Y6W8 199 aa7.73□□□□□ -1.17
CLDN1-201ENST00000295522 H7C423 109 aa7.72□□□□□ -1.17
CLDN1-201ENST00000295522 Q6Q795 121 aa7.72□□□□□ -1.17
CLDN1-201ENST00000295522 HTN1P15515 57 aa7.72□□□□□ -1.17
CLDN1-201ENST00000295522 RNASE6Q93091 150 aaKnown RBP7.72□□□□□ -1.17
CLDN1-201ENST00000295522 ANKRD11Q6UB99 2663 aaPredicted RBP7.72□□□□□ -1.17
CLDN1-201ENST00000295522 ANKHD1Q8IWZ3 2542 aaKnown RBP7.72□□□□□ -1.17
CLDN1-201ENST00000295522 F8W735 103 aaPredicted RBP7.72□□□□□ -1.17
CLDN1-201ENST00000295522 BUB3O43684 328 aa7.72□□□□□ -1.17
CLDN1-201ENST00000295522 TSHBP01222 138 aa7.72□□□□□ -1.17
CLDN1-201ENST00000295522 SPTBN4Q9H254 2564 aa7.72□□□□□ -1.17
CLDN1-201ENST00000295522 GAGE2AQ6NT46 116 aa7.71□□□□□ -1.17
CLDN1-201ENST00000295522 TRAV21A0A0B4J279 112 aa7.71□□□□□ -1.18
CLDN1-201ENST00000295522 PRR30Q53SZ7 412 aaPredicted RBP7.71□□□□□ -1.18
CLDN1-201ENST00000295522 TMEM190Q8WZ59 177 aa7.71□□□□□ -1.18
CLDN1-201ENST00000295522 ZNF625Q96I27 306 aaPredicted RBP7.71□□□□□ -1.18
CLDN1-201ENST00000295522 LINC01587Q99440 93 aa7.71□□□□□ -1.18
CLDN1-201ENST00000295522 MDFICQ9P1T7 246 aa7.71□□□□□ -1.18
CLDN1-201ENST00000295522 A8MZ25 164 aa7.71□□□□□ -1.18
CLDN1-201ENST00000295522 EIF4EBP3O60516 100 aaPredicted RBP7.71□□□□□ -1.18
CLDN1-201ENST00000295522 NDUFA7O95182 113 aa7.71□□□□□ -1.18
CLDN1-201ENST00000295522 C5orf47Q569G3 176 aa7.71□□□□□ -1.18
CLDN1-201ENST00000295522 FAM19A5Q7Z5A7 132 aaPredicted RBP7.71□□□□□ -1.18
CLDN1-201ENST00000295522 LINC00477Q96M19 166 aa7.71□□□□□ -1.18
CLDN1-201ENST00000295522 COX8CQ7Z4L0 72 aa7.7□□□□□ -1.18
CLDN1-201ENST00000295522 FAM215AQ9Y5M1 114 aa7.7□□□□□ -1.18
CLDN1-201ENST00000295522 LRBAP50851 2863 aa7.7□□□□□ -1.18
CLDN1-201ENST00000295522 ATRXP46100 2492 aa7.7□□□□□ -1.18
CLDN1-201ENST00000295522 PTPRQQ9UMZ3 2332 aa7.7□□□□□ -1.18
CLDN1-201ENST00000295522 PRRC2AP48634 2157 aaKnown RBP7.7□□□□□ -1.18
CLDN1-201ENST00000295522 G3V318 75 aa7.7□□□□□ -1.18
CLDN1-201ENST00000295522 SRSF2Q01130 221 aaKnown RBP7.7□□□□□ -1.18
CLDN1-201ENST00000295522 C8orf31Q8N9H6 132 aa7.7□□□□□ -1.18
CLDN1-201ENST00000295522 VCYO14598 125 aa7.69□□□□□ -1.18
CLDN1-201ENST00000295522 P0DMU3 169 aa7.69□□□□□ -1.18
CLDN1-201ENST00000295522 FAM231AP0DMU4 169 aa7.69□□□□□ -1.18
CLDN1-201ENST00000295522 FAM231CP0DMU5 169 aa7.69□□□□□ -1.18
CLDN1-201ENST00000295522 PF4V1P10720 104 aa7.69□□□□□ -1.18
CLDN1-201ENST00000295522 SPANXA1Q9NS26 97 aa7.69□□□□□ -1.18
CLDN1-201ENST00000295522 TRAV13-1A0A0B4J241 112 aa7.69□□□□□ -1.18
CLDN1-201ENST00000295522 MBD3L4A6NDZ8 208 aaPredicted RBP7.69□□□□□ -1.18
CLDN1-201ENST00000295522 MBD3L3A6NE82 208 aaPredicted RBP7.69□□□□□ -1.18
CLDN1-201ENST00000295522 MBD3L5A6NJ08 208 aaPredicted RBP7.69□□□□□ -1.18
CLDN1-201ENST00000295522 MBD3L2Q8NHZ7 208 aaPredicted RBP7.69□□□□□ -1.18
CLDN1-201ENST00000295522 TIMM21Q9BVV7 248 aa7.69□□□□□ -1.18
CLDN1-201ENST00000295522 A0A0B4J2C4 111 aa7.69□□□□□ -1.18
CLDN1-201ENST00000295522 hADV29S1A0JD25 119 aa7.69□□□□□ -1.18
CLDN1-201ENST00000295522 SMIM9A6NGZ8 99 aa7.69□□□□□ -1.18
CLDN1-201ENST00000295522 J3KT08 172 aa7.69□□□□□ -1.18
CLDN1-201ENST00000295522 ZNF883P0CG24 379 aa7.69□□□□□ -1.18
CLDN1-201ENST00000295522 PIP4P1Q86T03 277 aa7.69□□□□□ -1.18
CLDN1-201ENST00000295522 NRGNQ92686 78 aa7.69□□□□□ -1.18
CLDN1-201ENST00000295522 IGHV3-73A0A0B4J1V6 119 aa7.68□□□□□ -1.18
CLDN1-201ENST00000295522 PPP1R17O96001 155 aa7.68□□□□□ -1.18
CLDN1-201ENST00000295522 SUMO4Q6EEV6 95 aa7.68□□□□□ -1.18
CLDN1-201ENST00000295522 C3orf22Q8N5N4 141 aa7.68□□□□□ -1.18
CLDN1-201ENST00000295522 DNAJC30Q96LL9 226 aa7.68□□□□□ -1.18
CLDN1-201ENST00000295522 A0A0J9YXY3 114 aa7.68□□□□□ -1.18
CLDN1-201ENST00000295522 SPG11Q96JI7 2443 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms